BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002156
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   565   e-158
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   560   e-157
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   559   e-157
ref|XP_002313865.1| predicted protein [Populus trichocarpa] gi|2...   553   e-155
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su...   548   e-153

>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 318

 Score =  565 bits (1455), Expect = e-158
 Identities = 284/320 (88%), Positives = 308/320 (96%)
 Frame = +3

Query: 6   MEGASYQRFPKVKIRELKDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 185
           MEGASYQRFP++KIRELKDDY KFELR+TDASMANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1   MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 186 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 365
           VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC++CSVEFHLRAKCI+DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120

Query: 366 TSKELYSSDHTVVPVDFSDTGSGFENPEDQRGITIVKLRKGQELRLRAIARKGIGKDHAK 545
           TSK+LYSSDHTVVPVDFSD+ SG+++ E QRGI IVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHTVVPVDFSDS-SGYDSSE-QRGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 546 WSPAATVTFMYEPEIHINEEMMETLSLEEKTSVVESSPTKVFGINPHTQQVEVVDPEAYT 725
           WSPAATVTFMYEP+IHINE++ME+LSLEEK S VESSPTKVF I+P+TQQV VVDPEAYT
Sbjct: 179 WSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYT 238

Query: 726 YDDEVLKKVEAMGKPGLVEIYAKEDSFIFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 905
           YD+EV+KK E+MGKPGLV I AKEDSFIFTVESTGA+KASQLVLNAIE+LKQKLDAVRLS
Sbjct: 239 YDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLS 298

Query: 906 EDTVEADDQFGELGAHMRGG 965
           EDTVEADDQFGELGAHMRGG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  560 bits (1444), Expect = e-157
 Identities = 284/320 (88%), Positives = 306/320 (95%)
 Frame = +3

Query: 6   MEGASYQRFPKVKIRELKDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 185
           MEG SYQRFPK+KIRE+KDDYAKFELRETDASMANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 186 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 365
           VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC++D+TLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 366 TSKELYSSDHTVVPVDFSDTGSGFENPEDQRGITIVKLRKGQELRLRAIARKGIGKDHAK 545
           TSK+L SSDHTVVPVDFSD+ SG+++  D++GI IVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 121 TSKDLISSDHTVVPVDFSDS-SGYDSA-DKKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 546 WSPAATVTFMYEPEIHINEEMMETLSLEEKTSVVESSPTKVFGINPHTQQVEVVDPEAYT 725
           WSPAATVTFMYEPEIHINE++ME+L+LEEKTS VESSPTKVF I+  +QQV V D EAYT
Sbjct: 179 WSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYT 238

Query: 726 YDDEVLKKVEAMGKPGLVEIYAKEDSFIFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 905
           YDDEVLKK EAMGKPGLVEIYAKEDSFIFTVESTGA+KASQLVLNAI+VLKQKLDAVRLS
Sbjct: 239 YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLS 298

Query: 906 EDTVEADDQFGELGAHMRGG 965
           EDTVEADDQFGELGAHMRGG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
           vinifera]
          Length = 318

 Score =  559 bits (1441), Expect = e-157
 Identities = 283/320 (88%), Positives = 306/320 (95%)
 Frame = +3

Query: 6   MEGASYQRFPKVKIRELKDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 185
           MEG SYQRFPK+KIRE+KDDYAKFELRETDASMANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 186 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 365
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEFCSVEFHLRAKC++D+TLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 366 TSKELYSSDHTVVPVDFSDTGSGFENPEDQRGITIVKLRKGQELRLRAIARKGIGKDHAK 545
           TSK+L SSDHTVVPVDFSD+ SG+++  D++GI IVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 121 TSKDLISSDHTVVPVDFSDS-SGYDSA-DKKGIIIVKLRRGQELRLRAIARKGIGKDHAK 178

Query: 546 WSPAATVTFMYEPEIHINEEMMETLSLEEKTSVVESSPTKVFGINPHTQQVEVVDPEAYT 725
           WSPAATVTFMYEPEIHINE++ME+L+LEEKTS VESSPTKVF I+  +QQV V D EAYT
Sbjct: 179 WSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYT 238

Query: 726 YDDEVLKKVEAMGKPGLVEIYAKEDSFIFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 905
           YDDEVLKK EAMGKPGLVEIYAKEDSFIFTVESTGA+KASQLVLNAI+VLKQKLDAVRLS
Sbjct: 239 YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLS 298

Query: 906 EDTVEADDQFGELGAHMRGG 965
           EDTVEADDQFGELGAHMRGG
Sbjct: 299 EDTVEADDQFGELGAHMRGG 318


>ref|XP_002313865.1| predicted protein [Populus trichocarpa] gi|222850273|gb|EEE87820.1|
            predicted protein [Populus trichocarpa]
          Length = 346

 Score =  553 bits (1425), Expect = e-155
 Identities = 282/346 (81%), Positives = 307/346 (88%), Gaps = 3/346 (0%)
 Frame = +3

Query: 6    MEGASYQRFPKVKIRELKDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 185
            ME  SYQRFPK+KIRE+KDDY KFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 186  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 365
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 366  TSKELYSSDHTVVPVDFSDTGSG---FENPEDQRGITIVKLRKGQELRLRAIARKGIGKD 536
            TSK+LYSSDH V+PVDFSD       F++ E QRGI IVKLR+GQELRLRAIARKGIGKD
Sbjct: 121  TSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKD 180

Query: 537  HAKWSPAATVTFMYEPEIHINEEMMETLSLEEKTSVVESSPTKVFGINPHTQQVEVVDPE 716
            HAKWSPAATVTFMYEPEIHINE++METL+LEEK S +ESSPTKVF I+  TQQV VVDPE
Sbjct: 181  HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPE 240

Query: 717  AYTYDDEVLKKVEAMGKPGLVEIYAKEDSFIFTVESTGAVKASQLVLNAIEVLKQKLDAV 896
            AYTYDDEV+KK EAMGK GL++I AKEDSFIFTVESTGAVKASQLVLNAIE+LKQKLDAV
Sbjct: 241  AYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAV 300

Query: 897  RLSEDTVEADDQFGELGAHMRGG*PTLMVVRKQFVCELAIRYYLVY 1034
            RLS+DTVEADDQFGELG HMR      + +  QF     +++YL+Y
Sbjct: 301  RLSDDTVEADDQFGELGVHMRDRAGKCIWLDYQFTSFAFMQFYLLY 346


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Cucumis sativus]
          Length = 320

 Score =  548 bits (1412), Expect = e-153
 Identities = 275/320 (85%), Positives = 298/320 (93%)
 Frame = +3

Query: 6   MEGASYQRFPKVKIRELKDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 185
           MEG+SYQRFPKVKIREL+DDYAKFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 186 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 365
           VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC SDQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 366 TSKELYSSDHTVVPVDFSDTGSGFENPEDQRGITIVKLRKGQELRLRAIARKGIGKDHAK 545
           TSK+LYSSDHTVVPVDFSD+ +      D +GI IVKLR+GQELRLRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAK 180

Query: 546 WSPAATVTFMYEPEIHINEEMMETLSLEEKTSVVESSPTKVFGINPHTQQVEVVDPEAYT 725
           WSPAATVTFMYEP IHINE++METL+LEEK + VES PT+VF ++  T QV VVDPEAYT
Sbjct: 181 WSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYT 240

Query: 726 YDDEVLKKVEAMGKPGLVEIYAKEDSFIFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 905
           YDDEV+KK EAMGK GLV+I A+EDSFIFTVESTGA+KASQL+LNAI++LKQKLDAVRLS
Sbjct: 241 YDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS 300

Query: 906 EDTVEADDQFGELGAHMRGG 965
           +DTVEADDQFGELGAHMRGG
Sbjct: 301 DDTVEADDQFGELGAHMRGG 320