BLASTX nr result

ID: Atractylodes21_contig00002132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002132
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20486.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro...   112   4e-23
sp|Q02764.1|RK24_TOBAC RecName: Full=50S ribosomal protein L24, ...   102   3e-20
ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin...   100   2e-19
ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycin...    99   5e-19

>emb|CBI20486.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = -3

Query: 216 SFTALSLSSKSFLGQHFSPCPCPPLVKSTKGPCPIQTKLKRWERIKCKPNSLPIVHKMHV 37
           SFT+LSLSS SFLGQ FSP   P L KST+ PCPI  +LKRWER +CKPNSLP++HKMHV
Sbjct: 55  SFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNSLPVLHKMHV 114

Query: 36  KLGDTVKVIAGR 1
           K+GDTVK+I+GR
Sbjct: 115 KVGDTVKIISGR 126


>ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1
           [Vitis vinifera] gi|359493940|ref|XP_003634697.1|
           PREDICTED: 50S ribosomal protein L24, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|359493942|ref|XP_003634698.1| PREDICTED: 50S
           ribosomal protein L24, chloroplastic isoform 3 [Vitis
           vinifera] gi|147860928|emb|CAN78749.1| hypothetical
           protein VITISV_002445 [Vitis vinifera]
          Length = 191

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = -3

Query: 216 SFTALSLSSKSFLGQHFSPCPCPPLVKSTKGPCPIQTKLKRWERIKCKPNSLPIVHKMHV 37
           SFT+LSLSS SFLGQ FSP   P L KST+ PCPI  +LKRWER +CKPNSLP++HKMHV
Sbjct: 10  SFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNSLPVLHKMHV 69

Query: 36  KLGDTVKVIAGR 1
           K+GDTVK+I+GR
Sbjct: 70  KVGDTVKIISGR 81


>sp|Q02764.1|RK24_TOBAC RecName: Full=50S ribosomal protein L24, chloroplastic; AltName:
           Full=CL24; Flags: Precursor gi|170273|gb|AAA34086.1|
           ribosomal protein L24 [Nicotiana tabacum]
           gi|170324|gb|AAA34114.1| ribosomal protein L24
           [Nicotiana tabacum]
          Length = 187

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/64 (75%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -3

Query: 192 SKSFLGQHFSP-CPCPPLVKSTKGPCPIQTKLKRWERIKCKPNSLPIVHKMHVKLGDTVK 16
           S SF GQ FSP    PPLVKST+GPC IQ KLKRWER +CKPNSLP++HKMHVKLGDTVK
Sbjct: 12  STSFFGQRFSPPLSLPPLVKSTEGPCLIQAKLKRWERKECKPNSLPVLHKMHVKLGDTVK 71

Query: 15  VIAG 4
           +I+G
Sbjct: 72  IISG 75


>ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max]
           gi|255629161|gb|ACU14925.1| unknown [Glycine max]
          Length = 194

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/74 (67%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = -3

Query: 216 SFTALSLSSKSFLGQHFSPCPCPPLV--KSTKGPCPIQTKLKRWERIKCKPNSLPIVHKM 43
           S   LSLSS SFLGQ  SP   P L+  KST+  CPI  +LKRWER +CKPNSLPI+HKM
Sbjct: 10  SMVGLSLSSNSFLGQRLSPITLPSLLPGKSTEKQCPIVMRLKRWERKECKPNSLPILHKM 69

Query: 42  HVKLGDTVKVIAGR 1
           HVKLGDTV+VI+GR
Sbjct: 70  HVKLGDTVQVISGR 83


>ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycine max]
           gi|255628481|gb|ACU14585.1| unknown [Glycine max]
          Length = 193

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/74 (67%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = -3

Query: 216 SFTALSLSSKSFLGQHFSPCPCPPLV--KSTKGPCPIQTKLKRWERIKCKPNSLPIVHKM 43
           S   LSLSSKSFLGQ   P   P L+  KST+  CPI  +LKRWER +CKPNSLPI+HKM
Sbjct: 10  SMAGLSLSSKSFLGQLLPPITLPSLLPGKSTEKQCPIVMRLKRWERKECKPNSLPILHKM 69

Query: 42  HVKLGDTVKVIAGR 1
           HVKLGDTV+VI+GR
Sbjct: 70  HVKLGDTVQVISGR 83


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