BLASTX nr result

ID: Atractylodes21_contig00002130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002130
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02764.1|RK24_TOBAC RecName: Full=50S ribosomal protein L24, ...   100   9e-20
emb|CBI20486.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro...    93   3e-17
ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin...    87   1e-15
ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycin...    82   3e-14

>sp|Q02764.1|RK24_TOBAC RecName: Full=50S ribosomal protein L24, chloroplastic; AltName:
           Full=CL24; Flags: Precursor gi|170273|gb|AAA34086.1|
           ribosomal protein L24 [Nicotiana tabacum]
           gi|170324|gb|AAA34114.1| ribosomal protein L24
           [Nicotiana tabacum]
          Length = 187

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/59 (79%), Positives = 53/59 (89%), Gaps = 1/59 (1%)
 Frame = -1

Query: 178 GQRFSP-CPCPPLVKSTKGPCPIQAKLKRWERIKCKPNSLPIVHKMHVKLGDTVKVIAG 5
           GQRFSP    PPLVKST+GPC IQAKLKRWER +CKPNSLP++HKMHVKLGDTVK+I+G
Sbjct: 17  GQRFSPPLSLPPLVKSTEGPCLIQAKLKRWERKECKPNSLPVLHKMHVKLGDTVKIISG 75


>emb|CBI20486.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/82 (56%), Positives = 55/82 (67%)
 Frame = -1

Query: 247 KMAAIXXXXXXXXXXXXXXXXXLGQRFSPCPCPPLVKSTKGPCPIQAKLKRWERIKCKPN 68
           KMAA+                 LGQ FSP   P L KST+ PCPI  +LKRWER +CKPN
Sbjct: 45  KMAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPN 104

Query: 67  SLPIVHKMHVKLGDTVKVIAGR 2
           SLP++HKMHVK+GDTVK+I+GR
Sbjct: 105 SLPVLHKMHVKVGDTVKIISGR 126


>ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1
           [Vitis vinifera] gi|359493940|ref|XP_003634697.1|
           PREDICTED: 50S ribosomal protein L24, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|359493942|ref|XP_003634698.1| PREDICTED: 50S
           ribosomal protein L24, chloroplastic isoform 3 [Vitis
           vinifera] gi|147860928|emb|CAN78749.1| hypothetical
           protein VITISV_002445 [Vitis vinifera]
          Length = 191

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/59 (69%), Positives = 49/59 (83%)
 Frame = -1

Query: 178 GQRFSPCPCPPLVKSTKGPCPIQAKLKRWERIKCKPNSLPIVHKMHVKLGDTVKVIAGR 2
           GQ FSP   P L KST+ PCPI  +LKRWER +CKPNSLP++HKMHVK+GDTVK+I+GR
Sbjct: 23  GQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKIISGR 81


>ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max]
           gi|255629161|gb|ACU14925.1| unknown [Glycine max]
          Length = 194

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
 Frame = -1

Query: 178 GQRFSPCPCPPLV--KSTKGPCPIQAKLKRWERIKCKPNSLPIVHKMHVKLGDTVKVIAG 5
           GQR SP   P L+  KST+  CPI  +LKRWER +CKPNSLPI+HKMHVKLGDTV+VI+G
Sbjct: 23  GQRLSPITLPSLLPGKSTEKQCPIVMRLKRWERKECKPNSLPILHKMHVKLGDTVQVISG 82

Query: 4   R 2
           R
Sbjct: 83  R 83


>ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycine max]
           gi|255628481|gb|ACU14585.1| unknown [Glycine max]
          Length = 193

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = -1

Query: 178 GQRFSPCPCPPLV--KSTKGPCPIQAKLKRWERIKCKPNSLPIVHKMHVKLGDTVKVIAG 5
           GQ   P   P L+  KST+  CPI  +LKRWER +CKPNSLPI+HKMHVKLGDTV+VI+G
Sbjct: 23  GQLLPPITLPSLLPGKSTEKQCPIVMRLKRWERKECKPNSLPILHKMHVKLGDTVQVISG 82

Query: 4   R 2
           R
Sbjct: 83  R 83


Top