BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002096
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237104.1| cyclin-dependent kinases regulatory subunit ...   110   8e-25
ref|XP_002523737.1| Cyclin-dependent kinases regulatory subunit,...   109   8e-25
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]                112   1e-24
ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyr...   111   1e-24
ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [...   111   1e-24

>ref|NP_001237104.1| cyclin-dependent kinases regulatory subunit [Glycine max]
           gi|356542684|ref|XP_003539796.1| PREDICTED:
           cyclin-dependent kinases regulatory subunit 2-like
           [Glycine max] gi|42362268|gb|AAS13367.1|
           cyclin-dependent kinases regulatory subunit [Glycine
           max] gi|255628843|gb|ACU14766.1| unknown [Glycine max]
           gi|388501782|gb|AFK38957.1| unknown [Lotus japonicus]
          Length = 88

 Score =  110 bits (275), Expect(2) = 8e-25
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = -1

Query: 537 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSETEWRAIGVQQSRGWV 379
           MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSE EWRAIGVQQSRGWV
Sbjct: 1   MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWV 53



 Score = 28.9 bits (63), Expect(2) = 8e-25
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3

Query: 283 PLNYQQNQENPAQAHQTLLAK 221
           PLNYQQ QEN  QA Q++L K
Sbjct: 70  PLNYQQQQEN--QAQQSMLVK 88


>ref|XP_002523737.1| Cyclin-dependent kinases regulatory subunit, putative [Ricinus
           communis] gi|223537041|gb|EEF38677.1| Cyclin-dependent
           kinases regulatory subunit, putative [Ricinus communis]
          Length = 88

 Score =  109 bits (272), Expect(2) = 8e-25
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = -1

Query: 537 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSETEWRAIGVQQSRGWV 379
           MGQIQYSEKY+DDT+EYRHVVLPPEVAKLLPKNRLLSE EWRAIGVQQSRGWV
Sbjct: 1   MGQIQYSEKYYDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWV 53



 Score = 30.0 bits (66), Expect(2) = 8e-25
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = -3

Query: 283 PLNYQQNQENPAQAHQTLLAK 221
           PLNYQQ QEN  QA Q +LAK
Sbjct: 70  PLNYQQQQEN--QAQQNILAK 88


>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
          Length = 1291

 Score =  112 bits (281), Expect(2) = 1e-24
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = -1

Query: 549  ISLIMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSETEWRAIGVQQSRGWV 379
            I++ MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE EWRAIGVQQSRGWV
Sbjct: 1200 IAVEMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWV 1256



 Score = 25.8 bits (55), Expect(2) = 1e-24
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -3

Query: 283  PLNYQQNQENPAQAHQTLLAK 221
            PLNYQQ QE+ AQ +  L+AK
Sbjct: 1273 PLNYQQQQESQAQLN--LIAK 1291


>ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297324964|gb|EFH55384.1| cdk-subunit 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 87

 Score =  111 bits (278), Expect(2) = 1e-24
 Identities = 52/53 (98%), Positives = 52/53 (98%)
 Frame = -1

Query: 537 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSETEWRAIGVQQSRGWV 379
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE EWRAIGVQQSRGWV
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWV 53



 Score = 26.9 bits (58), Expect(2) = 1e-24
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -3

Query: 283 PLNYQQNQENPAQ 245
           PLNYQQ QEN AQ
Sbjct: 70  PLNYQQQQENQAQ 82


>ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [Arabidopsis
           thaliana] gi|75097781|sp|O23249.1|CKS1_ARATH RecName:
           Full=Cyclin-dependent kinases regulatory subunit 1;
           AltName: Full=CKS1-At gi|2274859|emb|CAA03859.1| Cks1
           protein [Arabidopsis thaliana] gi|4510420|gb|AAD21506.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|21593913|gb|AAM65878.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969580|dbj|BAD43482.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969798|dbj|BAD43591.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51970380|dbj|BAD43882.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|88010880|gb|ABD38867.1|
           At2g27960 [Arabidopsis thaliana]
           gi|330252970|gb|AEC08064.1| cyclin-dependent kinases
           regulatory subunit 1 [Arabidopsis thaliana]
          Length = 87

 Score =  111 bits (278), Expect(2) = 1e-24
 Identities = 52/53 (98%), Positives = 52/53 (98%)
 Frame = -1

Query: 537 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSETEWRAIGVQQSRGWV 379
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE EWRAIGVQQSRGWV
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWV 53



 Score = 26.9 bits (58), Expect(2) = 1e-24
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -3

Query: 283 PLNYQQNQENPAQ 245
           PLNYQQ QEN AQ
Sbjct: 70  PLNYQQQQENQAQ 82