BLASTX nr result

ID: Atractylodes21_contig00002050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002050
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323021.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
gb|ABK92450.1| unknown [Populus trichocarpa]                          167   6e-40
gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tu...   167   8e-40
sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4 gi|...   167   8e-40
sp|P46299.1|RS4_GOSHI RecName: Full=40S ribosomal protein S4 gi|...   167   8e-40

>ref|XP_002323021.1| predicted protein [Populus trichocarpa] gi|222867651|gb|EEF04782.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  167 bits (424), Expect = 6e-40
 Identities = 91/139 (65%), Positives = 95/139 (68%)
 Frame = -3

Query: 418 ALTYREVISILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENXXXXXXXXXXXXXXXX 239
           ALTYREVISILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+                
Sbjct: 55  ALTYREVISILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSL 114

Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI 59
                                      KLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLI
Sbjct: 115 REDEAKF--------------------KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLI 154

Query: 58  KANDTIKLDLESNKIVDFI 2
           KANDTIKLDLESNKIVDFI
Sbjct: 155 KANDTIKLDLESNKIVDFI 173


>gb|ABK92450.1| unknown [Populus trichocarpa]
          Length = 263

 Score =  167 bits (424), Expect = 6e-40
 Identities = 91/139 (65%), Positives = 95/139 (68%)
 Frame = -3

Query: 418 ALTYREVISILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENXXXXXXXXXXXXXXXX 239
           ALTYREVISILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+                
Sbjct: 55  ALTYREVISILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSL 114

Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI 59
                                      KLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLI
Sbjct: 115 REDEAKF--------------------KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLI 154

Query: 58  KANDTIKLDLESNKIVDFI 2
           KANDTIKLDLESNKIVDFI
Sbjct: 155 KANDTIKLDLESNKIVDFI 173


>gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tuberosum]
          Length = 264

 Score =  167 bits (423), Expect = 8e-40
 Identities = 92/139 (66%), Positives = 94/139 (67%)
 Frame = -3

Query: 418 ALTYREVISILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENXXXXXXXXXXXXXXXX 239
           ALTYREVISILMQR V+VD KVRTDKTYPAGFMDVVSIPKTNEN                
Sbjct: 55  ALTYREVISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSL 114

Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI 59
                                      KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI
Sbjct: 115 RDEESKF--------------------KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 154

Query: 58  KANDTIKLDLESNKIVDFI 2
           KANDTIKLDLESNKIVDFI
Sbjct: 155 KANDTIKLDLESNKIVDFI 173


>sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4 gi|457803|emb|CAA54095.1|
           ribosomal protein S4 [Solanum tuberosum]
          Length = 264

 Score =  167 bits (423), Expect = 8e-40
 Identities = 92/139 (66%), Positives = 94/139 (67%)
 Frame = -3

Query: 418 ALTYREVISILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENXXXXXXXXXXXXXXXX 239
           ALTYREVISILMQR V+VD KVRTDKTYPAGFMDVVSIPKTNEN                
Sbjct: 55  ALTYREVISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSL 114

Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI 59
                                      KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI
Sbjct: 115 RDEESKF--------------------KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 154

Query: 58  KANDTIKLDLESNKIVDFI 2
           KANDTIKLDLESNKIVDFI
Sbjct: 155 KANDTIKLDLESNKIVDFI 173


>sp|P46299.1|RS4_GOSHI RecName: Full=40S ribosomal protein S4 gi|488739|emb|CAA55882.1|
           ribosomal protein, small subunit 4e (RS4e) [Gossypium
           hirsutum]
          Length = 262

 Score =  167 bits (423), Expect = 8e-40
 Identities = 91/139 (65%), Positives = 95/139 (68%)
 Frame = -3

Query: 418 ALTYREVISILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENXXXXXXXXXXXXXXXX 239
           ALTYREVI+ILMQRHV+VD KVRTDKTYPAGFMDVVSIPKTNE+                
Sbjct: 55  ALTYREVIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAI 114

Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI 59
                                      KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI
Sbjct: 115 TGDETKF--------------------KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 154

Query: 58  KANDTIKLDLESNKIVDFI 2
           KANDTIKLDLESNKIVDFI
Sbjct: 155 KANDTIKLDLESNKIVDFI 173


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