BLASTX nr result

ID: Atractylodes21_contig00002008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002008
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303110.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
gb|AEX00355.1| IAA12 [Solanum lycopersicum]                           148   7e-34
emb|CAC84709.1| aux/IAA protein [Populus tremula x Populus tremu...   147   1e-33
ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ri...   146   3e-33
ref|XP_004147190.1| PREDICTED: LOW QUALITY PROTEIN: auxin-respon...   145   5e-33

>ref|XP_002303110.1| predicted protein [Populus trichocarpa] gi|222844836|gb|EEE82383.1|
           predicted protein [Populus trichocarpa]
           gi|429326558|gb|AFZ78619.1| hypothetical protein
           [Populus tomentosa]
          Length = 290

 Score =  149 bits (376), Expect = 3e-34
 Identities = 96/185 (51%), Positives = 119/185 (64%), Gaps = 37/185 (20%)
 Frame = -3

Query: 537 SSIAGTKRTAIDSVSPPH---ATSVVGWPPIRRAHQMPILANQIKSES-KEYNSRAESKN 370
           ++ AGTKR A DSVS  +   ++ VVGWPPIR +H+M I+ NQ KS++ +E+NS  + KN
Sbjct: 99  NATAGTKRAA-DSVSASNGAASSQVVGWPPIR-SHRMHIMVNQAKSQATEEFNSMNKRKN 156

Query: 369 ----------------KTNGYLSVKVNMEGTLIGRKVDLNAHTSYEMLARTLEDMFY--- 247
                           KT   L VKVNM+GTLIGRKVDLNAH  YE LA+ LE+MF    
Sbjct: 157 AVEEKVGNKNINIGNTKTRTSLFVKVNMDGTLIGRKVDLNAHGCYETLAQALENMFLRTT 216

Query: 246 -----AKLLSTET---------AGLLNGTSEFVLTYEDRDGDCMLVGDVPWQMFLSSVKR 109
                A+L + E          + LL G+SEFVLTYED+DGD MLVGDVPW MF+SSVKR
Sbjct: 217 TTLNMARLSTPEHKIMIDAKRHSQLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFISSVKR 276

Query: 108 LRILR 94
           LRI+R
Sbjct: 277 LRIMR 281


>gb|AEX00355.1| IAA12 [Solanum lycopersicum]
          Length = 313

 Score =  148 bits (373), Expect = 7e-34
 Identities = 92/191 (48%), Positives = 116/191 (60%), Gaps = 41/191 (21%)
 Frame = -3

Query: 543 PNSSIAGTKRTAIDSVSPPHAT--SVVGWPPIRRAHQMPILANQIK----SESKEYNSRA 382
           PN++  GTKR A DS+SPP ++   VVGWPPIR  ++M  L NQ K     E    N + 
Sbjct: 99  PNNASCGTKRNA-DSISPPRSSVSQVVGWPPIR-TYRMNTLVNQTKLPPPEEFSVTNEKC 156

Query: 381 ESKN--------KTNGY----------LSVKVNMEGTLIGRKVDLNAHTSYEMLARTLED 256
           +SKN        K N +          L VKVNM+G  IGRKVDLNAH SYE LA+TL++
Sbjct: 157 KSKNTIANAGSSKINNFAKEKGLVKASLFVKVNMDGVTIGRKVDLNAHNSYENLAQTLDN 216

Query: 255 MFYAKLLS-----------------TETAGLLNGTSEFVLTYEDRDGDCMLVGDVPWQMF 127
           MF     +                 T ++ LL+G+SEFVLTYED+DGD MLVGDVPW+MF
Sbjct: 217 MFLRPSTTVCARSSNVQELGVMSETTSSSRLLDGSSEFVLTYEDKDGDWMLVGDVPWEMF 276

Query: 126 LSSVKRLRILR 94
           +SSVKRLR++R
Sbjct: 277 ISSVKRLRVMR 287


>emb|CAC84709.1| aux/IAA protein [Populus tremula x Populus tremuloides]
          Length = 289

 Score =  147 bits (371), Expect = 1e-33
 Identities = 95/185 (51%), Positives = 119/185 (64%), Gaps = 37/185 (20%)
 Frame = -3

Query: 537 SSIAGTKRTAIDSVSPPH---ATSVVGWPPIRRAHQMPILANQIKSES-KEYNSRAESKN 370
           ++ AGTKR A DSVS  +   ++ VVGWPPIR +H+M I+ NQ KS++ +E+NS  + KN
Sbjct: 98  NATAGTKRAA-DSVSATNGAASSQVVGWPPIR-SHRMHIMVNQAKSQATEEFNSMNKRKN 155

Query: 369 ----------------KTNGYLSVKVNMEGTLIGRKVDLNAHTSYEMLARTLEDMFY--- 247
                           KT   L VKVNM+GTLIGRKVDL+AH  YE LA+ LE+MF    
Sbjct: 156 AVEEKVGNKNINIGNTKTRTSLFVKVNMDGTLIGRKVDLSAHGCYETLAQALENMFLRTT 215

Query: 246 -----AKLLSTET---------AGLLNGTSEFVLTYEDRDGDCMLVGDVPWQMFLSSVKR 109
                A+L + E          + LL G+SEFVLTYED+DGD MLVGDVPW MF+SSVKR
Sbjct: 216 TTLNMARLSTPEYKIMIDAKRHSQLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFISSVKR 275

Query: 108 LRILR 94
           LRI+R
Sbjct: 276 LRIMR 280


>ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
           gi|223532214|gb|EEF34018.1| Auxin-responsive protein
           IAA13, putative [Ricinus communis]
          Length = 318

 Score =  146 bits (368), Expect = 3e-33
 Identities = 89/188 (47%), Positives = 117/188 (62%), Gaps = 36/188 (19%)
 Frame = -3

Query: 534 SIAGTKRTAIDSVS-----PPHATSVVGWPPIRRAHQMPILANQIKSESKEYN------- 391
           +++GTKR A DSVS     P  A+ +VGWPP+R  +++  L NQ K+   E +       
Sbjct: 115 AVSGTKRAA-DSVSHEGGSPTAASQIVGWPPVR-TYRINSLVNQAKASRSEEDKSVVEQD 172

Query: 390 ------------SRAESKNKTNGYLS-VKVNMEGTLIGRKVDLNAHTSYEMLARTLEDMF 250
                       S+  + N   G+L  VKVNM+G  IGRKVDLNAH SYE LA+TLEDMF
Sbjct: 173 KSKDASKKICNGSKTNATNNEKGHLGFVKVNMDGIPIGRKVDLNAHASYETLAQTLEDMF 232

Query: 249 YA-----------KLLSTETAGLLNGTSEFVLTYEDRDGDCMLVGDVPWQMFLSSVKRLR 103
           +            K  ST+ + LL+G+SEFVLTYED++GD MLVGDVPW MFL+SVKRLR
Sbjct: 233 FRSTPSINSTGGEKQQSTKPSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLR 292

Query: 102 ILRNPKSS 79
           I+R  +++
Sbjct: 293 IMRTSEAN 300


>ref|XP_004147190.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA13-like
           [Cucumis sativus]
          Length = 301

 Score =  145 bits (366), Expect = 5e-33
 Identities = 93/186 (50%), Positives = 121/186 (65%), Gaps = 25/186 (13%)
 Frame = -3

Query: 546 TPNSSIAGTKRTAIDSV-----SPPHATSVVGWPPIRRAHQMPILANQIKS--------- 409
           T + S++GTKR A DS      SP     VVGWPPIR  ++M  L NQ K+         
Sbjct: 107 TCSVSVSGTKRAA-DSAPNEGGSPTALNQVVGWPPIR-TYRMNSLVNQAKTARAEEEDAG 164

Query: 408 -ESKEYNSRAESKNKT-----NGYLS-VKVNMEGTLIGRKVDLNAHTSYEMLARTLEDMF 250
            E K+  S+   KNKT      G+L  VKVN++G +IGRKVDLNAH+ YE LA  LEDMF
Sbjct: 165 CEEKKDQSKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLEDMF 224

Query: 249 YA--KLLSTETAGLLNGTSEFVLTYEDRDGDCMLVGDVPWQMFLSSVKRLRILRNPKSS- 79
           ++  K  + + + LL+G+SEFVLTYEDR+GD MLVGDVPW MF++SV+RLRI+R  +++ 
Sbjct: 225 FSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVNSVRRLRIMRTSEANG 284

Query: 78  -RPREQ 64
             PR Q
Sbjct: 285 LAPRSQ 290


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