BLASTX nr result

ID: Atractylodes21_contig00001476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001476
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, put...   148   1e-33
ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g036...   147   2e-33
ref|XP_003540354.1| PREDICTED: thylakoid lumenal protein At1g036...   146   4e-33
ref|XP_002306756.1| predicted protein [Populus trichocarpa] gi|1...   144   1e-32
emb|CBI28904.3| unnamed protein product [Vitis vinifera]              144   2e-32

>ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, putative [Ricinus
           communis] gi|223548669|gb|EEF50160.1| Photosystem II 11
           kDa protein precursor, putative [Ricinus communis]
          Length = 173

 Score =  148 bits (373), Expect = 1e-33
 Identities = 80/128 (62%), Positives = 89/128 (69%), Gaps = 2/128 (1%)
 Frame = +2

Query: 14  PLLVIPA--ALAASDDEYTKETQEVISKVRNTINMDKTDPNIATAXXXXXXXXXXXXXXX 187
           P  V+P   ALAASD+EY KET EVI K+R+TINM+K DPN+ATA               
Sbjct: 56  PAWVVPVVPALAASDEEYVKETGEVIDKIRSTINMEKNDPNVATA--------------- 100

Query: 188 XXXXXXXXXXXXXVAELRETSNTWVAKYRREKALLGRVSFRDIYSALNAVSGHYVSFGPT 367
                        VAELRETSN+WVAKYRREK LLGR SFRDIYSALNAVSGHY+SFGPT
Sbjct: 101 -------------VAELRETSNSWVAKYRREKTLLGRTSFRDIYSALNAVSGHYISFGPT 147

Query: 368 SPIPAKRK 391
           +PIPAKRK
Sbjct: 148 APIPAKRK 155


>ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
           [Glycine max]
          Length = 169

 Score =  147 bits (372), Expect = 2e-33
 Identities = 79/125 (63%), Positives = 89/125 (71%)
 Frame = +2

Query: 17  LLVIPAALAASDDEYTKETQEVISKVRNTINMDKTDPNIATAXXXXXXXXXXXXXXXXXX 196
           LL +  ALA+SD+EY KET+EVI+KVR TI MDK DPN+ATA                  
Sbjct: 55  LLPLSPALASSDEEYVKETEEVINKVRTTIVMDKNDPNVATA------------------ 96

Query: 197 XXXXXXXXXXVAELRETSNTWVAKYRREKALLGRVSFRDIYSALNAVSGHYVSFGPTSPI 376
                     VAELRETSN+WVAKYRREKALLGR SFRDIYSALNAVSGHY+SFGPT+PI
Sbjct: 97  ----------VAELRETSNSWVAKYRREKALLGRASFRDIYSALNAVSGHYISFGPTAPI 146

Query: 377 PAKRK 391
           PAKR+
Sbjct: 147 PAKRR 151


>ref|XP_003540354.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
           [Glycine max]
          Length = 173

 Score =  146 bits (369), Expect = 4e-33
 Identities = 78/125 (62%), Positives = 90/125 (72%)
 Frame = +2

Query: 17  LLVIPAALAASDDEYTKETQEVISKVRNTINMDKTDPNIATAXXXXXXXXXXXXXXXXXX 196
           L+ +  ALA+SD+EY KET+EVI+KVR TI MDK DPN+ATA                  
Sbjct: 59  LVPLSPALASSDEEYMKETEEVINKVRTTIVMDKNDPNVATA------------------ 100

Query: 197 XXXXXXXXXXVAELRETSNTWVAKYRREKALLGRVSFRDIYSALNAVSGHYVSFGPTSPI 376
                     VAELRETSN+WVAKYRREKALLGRVSFRD+YSALNAVSGHY+SFGPT+PI
Sbjct: 101 ----------VAELRETSNSWVAKYRREKALLGRVSFRDMYSALNAVSGHYISFGPTAPI 150

Query: 377 PAKRK 391
           PAKR+
Sbjct: 151 PAKRR 155


>ref|XP_002306756.1| predicted protein [Populus trichocarpa] gi|118489928|gb|ABK96761.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222856205|gb|EEE93752.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  144 bits (364), Expect = 1e-32
 Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
 Frame = +2

Query: 5   LSSPLLV-IPAALAASDDEYTKETQEVISKVRNTINMDKTDPNIATAXXXXXXXXXXXXX 181
           L+SPL++ +  A AASD+EY K+T+EVI KVR T+NMDK+DPN+A A             
Sbjct: 56  LTSPLILPVTPAFAASDEEYVKDTEEVIGKVRTTMNMDKSDPNVADA------------- 102

Query: 182 XXXXXXXXXXXXXXXVAELRETSNTWVAKYRREKALLGRVSFRDIYSALNAVSGHYVSFG 361
                          VA LRETSN+WVAKYRREKALLGR SFRDIYSALNAV+GHY+SFG
Sbjct: 103 ---------------VAVLRETSNSWVAKYRREKALLGRASFRDIYSALNAVTGHYISFG 147

Query: 362 PTSPIPAKRK 391
           PT+PIP+KRK
Sbjct: 148 PTAPIPSKRK 157


>emb|CBI28904.3| unnamed protein product [Vitis vinifera]
          Length = 203

 Score =  144 bits (363), Expect = 2e-32
 Identities = 76/125 (60%), Positives = 89/125 (71%)
 Frame = +2

Query: 17  LLVIPAALAASDDEYTKETQEVISKVRNTINMDKTDPNIATAXXXXXXXXXXXXXXXXXX 196
           L V P A+AA+D+EY KET +VI+KVR TINMDKTDP++ATA                  
Sbjct: 89  LPVAPQAVAANDEEYVKETADVINKVRTTINMDKTDPDVATA------------------ 130

Query: 197 XXXXXXXXXXVAELRETSNTWVAKYRREKALLGRVSFRDIYSALNAVSGHYVSFGPTSPI 376
                     VA+LR+ SN+WVAKYRREKALLGR SFRD+YSALNAVSGHY+SFGPT+PI
Sbjct: 131 ----------VADLRDASNSWVAKYRREKALLGRPSFRDMYSALNAVSGHYISFGPTAPI 180

Query: 377 PAKRK 391
           PAKRK
Sbjct: 181 PAKRK 185


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