BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001425
         (3950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...  1445   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1415   0.0  
ref|XP_002321582.1| rna-dependent RNA polymerase [Populus tricho...  1370   0.0  
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1336   0.0  
ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1336   0.0  

>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 1445 bits (3741), Expect = 0.0
 Identities = 720/1123 (64%), Positives = 875/1123 (77%), Gaps = 2/1123 (0%)
 Frame = -1

Query: 3587 MAVEERATATVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQF 3408
            M VE+R TATVRVSNIP++  AK L  F ES  GK +VFAC+I S+HKNWKSRG GRVQF
Sbjct: 1    MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60

Query: 3407 ETLESKSKAMFLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDC 3228
            ET +SK +++ LS QG L FKG  L L+ S DD+I RP++ + R + G L TG+L   D 
Sbjct: 61   ETSQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKGILHTGILLENDY 120

Query: 3227 MFVLEAWDDVKSWVLPERKTLEFWVRHC-GETYRMELQFSDVLEASPCSLDNQQPNAAVL 3051
            M VLE W++VK+ ++PERK+LEFWV H  GE YR+E+QF D++E   CSL++++   A+L
Sbjct: 121  MEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLEDEK--TALL 178

Query: 3050 LKLKHAPKLYQRLSGSKVSARFSSDRYHICKEDFEFTWVRTTDFSSRKSIGQSCTLCLEF 2871
            LKLKHAPKLYQR+SG  V+++FSSDRYH+C+ED EF WVRTTDFS+ KSIG S + C E 
Sbjct: 179  LKLKHAPKLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWEI 238

Query: 2870 KQDCSALDSFTSLPFYIKDLIKLSMKDGEEFHSSSDIVPLVRCEPELELPYEILFQLNSL 2691
            +    + D  + LP+   D++ L + +  + +S+S++VPL     +L+LPYEILFQLNSL
Sbjct: 239  EDGLLSSDLLSGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSL 298

Query: 2690 VQTQKVSLASVDSDLIKFIISQDQDSVMTVLKRMHKSHSTCYDPIVFIKDKVDALSKTVK 2511
            + T K+SL +V +DLI+ +   + D+ M +L++MHK  STC++P+ FIK ++  L K  K
Sbjct: 299  IHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSK 358

Query: 2510 I-PSVVHSKSASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVE 2334
              PS  +S+  +QN +MS+HRV +TP+K+YCLGPELE SNYIVK+++ +ASDFLRVTFVE
Sbjct: 359  NQPSSSYSRLVNQN-MMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVE 417

Query: 2333 EDWGKLQANVISTSLQHGIFSKPHRTKVYHRALHIMINGLCIGSKKFEFLAFSASQLRSN 2154
            EDWGKL  N IS S++ GIF+KP+RTK+YHR L I+ +GL IGSK+F FLAFSASQLRSN
Sbjct: 418  EDWGKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSN 477

Query: 2153 SVWMFASNEHVTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDI 1974
            SVWMFASNEHV AE IR WMGCFN IRSVSKCAARMGQLFSTS QT+EV   HVEI+PDI
Sbjct: 478  SVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDI 537

Query: 1973 EVKTDGVDYCFSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKL 1794
            EV +DGV YCFSDGIGKIS +FA +VA K GL +TPSAFQIRYGGYKGVIAVDRNSF+KL
Sbjct: 538  EVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKL 597

Query: 1793 SLRKSMLKFNSKNRMLNVTKHSESQSCYLNREIVNLMSTLGVEDKAFLALQDVQLQILNA 1614
            SLR SMLKF SKNRMLN+TK S++  CYLNREIV L+STLGVEDK F  L D  L +L  
Sbjct: 598  SLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGK 657

Query: 1613 MLYSREDALTVLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXLRTRCR 1434
            ML + E AL VL+ +G  DVK IL++ML QGY PN EPY               LR+RCR
Sbjct: 658  MLTTNEAALDVLESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCR 717

Query: 1433 IFVSKGRILVGCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVT 1254
            IF+ KGR+LVGCLDE+G+L+YGQVY RIT+TK EL+S +  +F+K+DETT+VV G VVVT
Sbjct: 718  IFIHKGRVLVGCLDETGILNYGQVYARITMTKAELQSAQQSFFQKVDETTAVVRGNVVVT 777

Query: 1253 RNPCLHPGDVRVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDE 1074
            +NPCLHPGDVRVLEAVYE+AL+EK + DCI+FPQKGERPHPNECSGGDLDGDLYFISWDE
Sbjct: 778  KNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDE 837

Query: 1073 SLVPPRTVTPMDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEK 894
            +L+P +TVTPMDYTGRR R+MDH+VTL+EI RFFVDYM SDTLGAISTAHLVHAD EP+K
Sbjct: 838  NLIPRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDK 897

Query: 893  ALSSKCLQLATLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYR 714
            AL+ KCLQLATLHSMAVDFAKTGA AEMPR LKPRE+PDF+ RWDKPMYIS+G LGKLYR
Sbjct: 898  ALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYR 957

Query: 713  ATKESELLQISASAFSATAIQDAYDQDLEVTGFEDFIEIAQTHKEMYLDSLTSLMNYYEA 534
            A   S +   S    S  AIQDAYD  L   G+E FIE A+ HKE YLD + SL+NYY A
Sbjct: 958  AIVNSSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGA 1017

Query: 533  ETEDEILTGNIRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWLEGGCKAEDHHKLA 354
            E E EILTGN+R KS YLQRDNRRY E KDRILV+ + L +E KGW  G CK ++H KLA
Sbjct: 1018 EKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLA 1077

Query: 353  SAWYHVTYRADYGNGSSVKCLGFPWIVGHLLLEIKSINSRNMS 225
            SAWYHVTY   Y  GS+  CLGFPW+VG +LL+IK  N+R ++
Sbjct: 1078 SAWYHVTYHPSYCEGSA-NCLGFPWVVGDILLDIKLHNTRKIT 1119


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1415 bits (3663), Expect = 0.0
 Identities = 701/1119 (62%), Positives = 870/1119 (77%), Gaps = 1/1119 (0%)
 Frame = -1

Query: 3587 MAVEERATATVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQF 3408
            MAV ER T  V+VSNIP++  AK+L  FLES  G +T++A EI+++HKNWKSRGFGRVQF
Sbjct: 1    MAVGERPT--VKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQF 58

Query: 3407 ETLESKSKAMFLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDC 3228
            ETL++K  A  LS QG L F+G +LS+S + DD+I+RPV+P N+V+ G L  G L   DC
Sbjct: 59   ETLQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVEDDC 118

Query: 3227 MFVLEAWDDVKSWVLPERKTLEFWVRHCGETYRMELQFSDVLEASPCSLDNQQPNAAVLL 3048
            M VLE+W+ VK+ V+PER  +EFWV   GE Y++E+ F DVLE+S C L   + NA +LL
Sbjct: 119  MLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGGKVNA-LLL 177

Query: 3047 KLKHAPKLYQRLSGSKVSARFSSDRYHICKEDFEFTWVRTTDFSSRKSIGQSCTLCLEFK 2868
            KLK+APK++Q+ +G  ++++FS+DRYHI KED EF W+RTTDFSS KS+GQS + C E K
Sbjct: 178  KLKYAPKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIK 237

Query: 2867 QDCSALDSFTSLPFYIKDLIKLSMKDGEEFHSSSDIVPLVRCEPELELPYEILFQLNSLV 2688
            +   ALD F S P+Y KDL +L+++ GE F S S +VPLV+CE   +L YEILFQLNSLV
Sbjct: 238  EGFPALDIFASFPYY-KDLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLV 296

Query: 2687 QTQKVSLASVDSDLIKFIISQDQDSVMTVLKRMHKSHSTCYDPIVFIKDKVDALSKTVK- 2511
              QK+SLA+VD+DLI+ + +   D+ + +L+++HK  ST YDPI FIK +   ++  +K 
Sbjct: 297  HAQKISLAAVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKN 356

Query: 2510 IPSVVHSKSASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVEE 2331
            +P   HS+  + N +MS HRV +TP+KIYCLGPELE+SNY+VKHY+AYASDF+RV+FVEE
Sbjct: 357  LPPSSHSR-LTNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEE 415

Query: 2330 DWGKLQANVISTSLQHGIFSKPHRTKVYHRALHIMINGLCIGSKKFEFLAFSASQLRSNS 2151
            DW KL +N +S S++   F+ P RT++YHR L I+  G+ IG+K+F+FLAFSASQLRSNS
Sbjct: 416  DWSKLPSNALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSNS 475

Query: 2150 VWMFASNEHVTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDIE 1971
            VWMFASN+ V  + IR WMGCF  IRSVSKCAARMGQLFS+S QT+ V    VE+IPDIE
Sbjct: 476  VWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIE 535

Query: 1970 VKTDGVDYCFSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKLS 1791
            V +DG  YCFSDGIGKISLSFAK+VA K GL  TPSAFQIRYGGYKGVIAVDRNSF+KLS
Sbjct: 536  VTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLS 595

Query: 1790 LRKSMLKFNSKNRMLNVTKHSESQSCYLNREIVNLMSTLGVEDKAFLALQDVQLQILNAM 1611
            LR SMLKF S+NRMLNVTK SES  CYLNREIV+L+STLGVED+ F AL + Q+ +L+ M
Sbjct: 596  LRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKM 655

Query: 1610 LYSREDALTVLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXLRTRCRI 1431
            L +R+ AL VL+ +G  D K+IL KMLLQGYEPN EPY               +RTRCRI
Sbjct: 656  LTNRQAALDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRI 715

Query: 1430 FVSKGRILVGCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVTR 1251
            FV K R+L+GCLDE+G+L+YGQVYVR+T+TK E + R   +F+K+D+TTSVV+GKV+VT+
Sbjct: 716  FVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVIVTK 775

Query: 1250 NPCLHPGDVRVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDES 1071
            NPCLHPGD+RVL+AVYE+ L+EK   DCI+FPQKGERPHPNECSGGDLDGD +FI WDE 
Sbjct: 776  NPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEG 835

Query: 1070 LVPPRTVTPMDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEKA 891
            L+P +T  PMDYT RRPR+MDHDVTLEEI +FFVDYM +DTLG ISTAHLVHAD EPEKA
Sbjct: 836  LIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKA 895

Query: 890  LSSKCLQLATLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYRA 711
             S KCL+LATLHSMAVDFAKTGAPAEMPRVLKP+E+PDFM R DKPMYIS G LGKLYRA
Sbjct: 896  RSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRA 955

Query: 710  TKESELLQISASAFSATAIQDAYDQDLEVTGFEDFIEIAQTHKEMYLDSLTSLMNYYEAE 531
            T  S + + S+  +S T    AYD DLEV GFE F+EIA+ HKEMY + + +LMN+Y AE
Sbjct: 956  TIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAE 1015

Query: 530  TEDEILTGNIRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWLEGGCKAEDHHKLAS 351
            +EDE+LTGN+RNK  YLQRDNRR+ E KDRIL++++ L +EAK WL G CK   H K+AS
Sbjct: 1016 SEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMAS 1075

Query: 350  AWYHVTYRADYGNGSSVKCLGFPWIVGHLLLEIKSINSR 234
            AWYHVTY + + +  +   L FPWIVG +LL IKS NSR
Sbjct: 1076 AWYHVTYHSTF-SSQTPNFLSFPWIVGEVLLVIKSANSR 1113


>ref|XP_002321582.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1110

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 680/1111 (61%), Positives = 851/1111 (76%), Gaps = 1/1111 (0%)
 Frame = -1

Query: 3560 TVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQFETLESKSKA 3381
            +VRV+NIP+++TAK++L +L +  GK +VFA EIS+  KNW SRGFGRVQF +LE K +A
Sbjct: 9    SVRVTNIPQTITAKEILQYLVAQLGKDSVFAIEISTVRKNWNSRGFGRVQFSSLEVKHEA 68

Query: 3380 MFLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDCMFVLEAWDD 3201
            + LS +  L  K  NL LS + DD+I RPV+  NR+E+G L  G +++   + VLE W+ 
Sbjct: 69   LSLSLKNKLVLKSQNLKLSETYDDIIPRPVKDQNRMENGVLYVGFMKKETTLCVLEYWEG 128

Query: 3200 VKSWVLPERKTLEFWVRHCGE-TYRMELQFSDVLEASPCSLDNQQPNAAVLLKLKHAPKL 3024
            V+ W +PER+ +EFW+R   E  Y++ ++F D+LEA    LD  + NA V+LKL++ P++
Sbjct: 129  VRGWFMPERRRIEFWIRVGQEFRYKLVVEFEDILEAVGYPLDGDKVNA-VVLKLRYGPRI 187

Query: 3023 YQRLSGSKVSARFSSDRYHICKEDFEFTWVRTTDFSSRKSIGQSCTLCLEFKQDCSALDS 2844
            YQ++SG  ++++FS++RY  CKEDF+F WVRTTD S+ KSIGQS + C E  +   A D+
Sbjct: 188  YQKISGPGIASKFSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDT 247

Query: 2843 FTSLPFYIKDLIKLSMKDGEEFHSSSDIVPLVRCEPELELPYEILFQLNSLVQTQKVSLA 2664
            F + P+Y +D+ +L ++DGEEF S+S+ VPL+RC  + +L YE+LFQLNSLV TQK+SLA
Sbjct: 248  FRNFPYYQEDMNRLDLEDGEEFCSASETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLA 306

Query: 2663 SVDSDLIKFIISQDQDSVMTVLKRMHKSHSTCYDPIVFIKDKVDALSKTVKIPSVVHSKS 2484
            +VDSDLIK + +   ++ + +L+++HK   TCYDP+ F+K    +L +++  P     KS
Sbjct: 307  AVDSDLIKILRNLTVNTAIIILQKLHKLKMTCYDPLSFVKQ---SLRESLSSPP----KS 359

Query: 2483 ASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVEEDWGKLQANV 2304
             ++N IMS HR  ITP+KI+CLGPE E SNY+VKH++ YASDF+RVTFVEEDW KL AN 
Sbjct: 360  LTENNIMSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKLPANA 419

Query: 2303 ISTSLQHGIFSKPHRTKVYHRALHIMINGLCIGSKKFEFLAFSASQLRSNSVWMFASNEH 2124
            ISTS+Q GIF+KP RT +YHR L I+ +G  IG+K+FEFLAFSASQLRSNSVWMFASN  
Sbjct: 420  ISTSIQRGIFAKPFRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRSNSVWMFASNNG 479

Query: 2123 VTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDIEVKTDGVDYC 1944
            V AE IR WMGCF+ IRSVSKCAARMGQLFS+S QT  V    VEIIPDIEV TDG+DYC
Sbjct: 480  VKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDYC 539

Query: 1943 FSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKLSLRKSMLKFN 1764
            FSDGIGKISLSFAK+VA K GL HTPSAFQIRYGGYKGV+AVDRNSF+KLSLR SMLKF+
Sbjct: 540  FSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFD 599

Query: 1763 SKNRMLNVTKHSESQSCYLNREIVNLMSTLGVEDKAFLALQDVQLQILNAMLYSREDALT 1584
            S+NRMLNVTK SES  CYLNREI++L+STLGV D+ F ALQ  QL  L  ML ++E AL 
Sbjct: 600  SENRMLNVTKWSESMPCYLNREIISLLSTLGVADEIFQALQQKQLYRLRKMLTNKESALD 659

Query: 1583 VLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXLRTRCRIFVSKGRILV 1404
            VL+ L   D K+ILV+MLLQGYEPN EPY               LR+RCRIFV KGRIL+
Sbjct: 660  VLENLAWADSKNILVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILI 719

Query: 1403 GCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVTRNPCLHPGDV 1224
            GCLDESG+LDYGQVYVRIT+TK EL+  +  +FRK+DE+TS ++G+V VT+NPCLHPGD+
Sbjct: 720  GCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKVDESTSTIIGEVAVTKNPCLHPGDI 779

Query: 1223 RVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDESLVPPRTVTP 1044
            RVLEAVY++ L+EK   DCI+FPQ G RPHPNECSGGDLDGD +FISWDE L+P  T  P
Sbjct: 780  RVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAP 839

Query: 1043 MDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEKALSSKCLQLA 864
            MDY G R R+MDH+VTLEEI RFFVDYM +DTLGAISTAHLVHADCEP+KA S KCLQLA
Sbjct: 840  MDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPDKARSEKCLQLA 899

Query: 863  TLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYRATKESELLQI 684
            TLHSMAVDFAKTGAPAEMP  LKPRE+PDFM R +K MYIS G LGKLYR   +S   + 
Sbjct: 900  TLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQER 959

Query: 683  SASAFSATAIQDAYDQDLEVTGFEDFIEIAQTHKEMYLDSLTSLMNYYEAETEDEILTGN 504
            S   +S    +  YDQDLEV GFEDF+ IA  +KE Y++ +++LM+YY A+TEDEILTGN
Sbjct: 960  SNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGN 1019

Query: 503  IRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWLEGGCKAEDHHKLASAWYHVTYRA 324
            +R++ +YLQRDNR+YG+ KDRILV+++ L +EAK W E  C   +H  +ASAWYHVTY  
Sbjct: 1020 LRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYHVTYHP 1079

Query: 323  DYGNGSSVKCLGFPWIVGHLLLEIKSINSRN 231
             Y +   + CL FPWIVG +LL IKS+NSRN
Sbjct: 1080 TYFH-ERMNCLSFPWIVGDILLNIKSLNSRN 1109


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score = 1336 bits (3458), Expect = 0.0
 Identities = 657/1118 (58%), Positives = 845/1118 (75%)
 Frame = -1

Query: 3587 MAVEERATATVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQF 3408
            MA  ER+T  +RVSN+P S  A+DLL+FL S  G  +VFA EI ++ KNWKSRG GRVQF
Sbjct: 1    MAQPERST--LRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQF 58

Query: 3407 ETLESKSKAMFLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDC 3228
             TLE+K+KAM LS Q  L F   NL  S   DD+++RPV   NR E+G L  G + + + 
Sbjct: 59   TTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEER 118

Query: 3227 MFVLEAWDDVKSWVLPERKTLEFWVRHCGETYRMELQFSDVLEASPCSLDNQQPNAAVLL 3048
            M VLE+W+ VK+W++PER+ +EFW+ H  E Y++E+ F ++LE +   L  ++ NA +LL
Sbjct: 119  MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNA-LLL 177

Query: 3047 KLKHAPKLYQRLSGSKVSARFSSDRYHICKEDFEFTWVRTTDFSSRKSIGQSCTLCLEFK 2868
            KLK+AP++Y+++SGS +++RFSS RY +C ED+++ WVRTT+FS  +S+GQS + C E +
Sbjct: 178  KLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVE 237

Query: 2867 QDCSALDSFTSLPFYIKDLIKLSMKDGEEFHSSSDIVPLVRCEPELELPYEILFQLNSLV 2688
            +D  A D F+  PFY +    + ++DGEEF S+S+IVPL++      L YE+ +QLNSLV
Sbjct: 238  EDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLV 297

Query: 2687 QTQKVSLASVDSDLIKFIISQDQDSVMTVLKRMHKSHSTCYDPIVFIKDKVDALSKTVKI 2508
              QK+SL++ + DLI F+ + D D+ + VL+R+H+    CYDP+ F+K ++    +  K 
Sbjct: 298  HMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKS 357

Query: 2507 PSVVHSKSASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVEED 2328
                  K  S N +M+ +RV +TP++IYCLGPELE SNY+VK++S+YASDF+RVTFVEED
Sbjct: 358  LPPSSQKRLSNN-VMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEED 416

Query: 2327 WGKLQANVISTSLQHGIFSKPHRTKVYHRALHIMINGLCIGSKKFEFLAFSASQLRSNSV 2148
            W KL A  ++TS+Q GI SKP+RT++YHR + ++ +G+ IG+K+FEFLAFSASQLRSNSV
Sbjct: 417  WSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSV 476

Query: 2147 WMFASNEHVTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDIEV 1968
            WMFAS++++ AE IR WMGCF  IRS+SKCAARMGQLFS+S QT+ V    VEIIPDIEV
Sbjct: 477  WMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEV 536

Query: 1967 KTDGVDYCFSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKLSL 1788
             TDG+DYCFSDGIGKISLSFA++VA K G+ H PSAFQIRYGGYKGVIAVDRNSF+KLSL
Sbjct: 537  NTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSL 596

Query: 1787 RKSMLKFNSKNRMLNVTKHSESQSCYLNREIVNLMSTLGVEDKAFLALQDVQLQILNAML 1608
            R SMLKF SKN+MLNVTK  +S  CYLNREI  L+STLGV+D++F ALQ  QL +L  ML
Sbjct: 597  RDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRML 656

Query: 1607 YSREDALTVLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXLRTRCRIF 1428
              ++ AL VL+     D  +ILV+ML  GYEPN EPY               LR+RCRIF
Sbjct: 657  TDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIF 716

Query: 1427 VSKGRILVGCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVTRN 1248
            V KGRIL+GCLDE+G+L+YGQVY  ITLTK+EL++R   YF  +DET S+++GKVVVT+N
Sbjct: 717  VPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKN 776

Query: 1247 PCLHPGDVRVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDESL 1068
            PCLHPGDVRVLEA++ + L+EK   DC++FPQKG RPH NECSGGDLDGDLYFISWDE+L
Sbjct: 777  PCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENL 836

Query: 1067 VPPRTVTPMDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEKAL 888
            +PP+T  PMDYTGRRPR+MDHDV LEEI +FFVDYM +DTLGAISTAHLVHAD EP+KAL
Sbjct: 837  IPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKAL 896

Query: 887  SSKCLQLATLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYRAT 708
            S+KCL+LA LHSMAVDFAKTGAPAEMPRVLKPRE+PDFM R+DKPMYIS   LGKLYRA 
Sbjct: 897  SAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAA 956

Query: 707  KESELLQISASAFSATAIQDAYDQDLEVTGFEDFIEIAQTHKEMYLDSLTSLMNYYEAET 528
             +S   + S   +S  A +  YD DLEV GFE F+EIA+T+KEMY++ ++ LMNYY AE 
Sbjct: 957  VKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEY 1016

Query: 527  EDEILTGNIRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWLEGGCKAEDHHKLASA 348
            EDEIL G++R+++SYLQRDNR+YG+ KDRIL++++ L +E K W E  C   +   +ASA
Sbjct: 1017 EDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASA 1076

Query: 347  WYHVTYRADYGNGSSVKCLGFPWIVGHLLLEIKSINSR 234
            WYHVTY   Y     +  L FPW V  +LL IK++NS+
Sbjct: 1077 WYHVTYHPSYFK-EDMFYLSFPWAVSDVLLNIKAMNSK 1113


>ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus]
          Length = 1117

 Score = 1336 bits (3457), Expect = 0.0
 Identities = 657/1118 (58%), Positives = 844/1118 (75%)
 Frame = -1

Query: 3587 MAVEERATATVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQF 3408
            MA  ER+T  +RVSN+P S  A+DLL+FL S  G  +VFA EI ++ KNWKSRG GRVQF
Sbjct: 1    MAQPERST--LRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQF 58

Query: 3407 ETLESKSKAMFLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDC 3228
             TLE+K+KAM LS Q  L F   NL  S   DD+++RPV   NR E+G L  G + + + 
Sbjct: 59   TTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEER 118

Query: 3227 MFVLEAWDDVKSWVLPERKTLEFWVRHCGETYRMELQFSDVLEASPCSLDNQQPNAAVLL 3048
            M VLE+W+ VK+W++PER+ +EFW+ H  E Y++E+ F ++LE +   L  ++ NA +LL
Sbjct: 119  MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNA-LLL 177

Query: 3047 KLKHAPKLYQRLSGSKVSARFSSDRYHICKEDFEFTWVRTTDFSSRKSIGQSCTLCLEFK 2868
            KLK+AP++Y+++SGS +++RFSS RY +C ED+++ WVRTT+FS  +S+GQS + C E +
Sbjct: 178  KLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVE 237

Query: 2867 QDCSALDSFTSLPFYIKDLIKLSMKDGEEFHSSSDIVPLVRCEPELELPYEILFQLNSLV 2688
            +D  A D F+  PFY +    + ++DGEEF S+S+IVPL++      L YE+ +QLNSLV
Sbjct: 238  EDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLV 297

Query: 2687 QTQKVSLASVDSDLIKFIISQDQDSVMTVLKRMHKSHSTCYDPIVFIKDKVDALSKTVKI 2508
              QK+SL++ + DLI F+ + D D+ + VL+R+H+    CYDP+ F+K ++    +  K 
Sbjct: 298  HMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKS 357

Query: 2507 PSVVHSKSASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVEED 2328
                  K  S N +M+ +RV +TP++IYCLGPELE SNY+VK++S+YASDF+RVTFVEED
Sbjct: 358  LPPSSQKRLSNN-VMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEED 416

Query: 2327 WGKLQANVISTSLQHGIFSKPHRTKVYHRALHIMINGLCIGSKKFEFLAFSASQLRSNSV 2148
            W KL A  ++TS+Q GI SKP+RT++YHR + ++ +G+ IG+K+FEFLAFSASQLRSNSV
Sbjct: 417  WSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSV 476

Query: 2147 WMFASNEHVTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDIEV 1968
            WMFAS++++ AE IR WMGCF  IRS+SKCAARMGQLFS+S QT+ V    VEIIPDIEV
Sbjct: 477  WMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEV 536

Query: 1967 KTDGVDYCFSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKLSL 1788
             TDG+DYCFSDGIGKISLSFA++VA K G+ H PSAFQIRYGGYKGVIAVDRNSF+KLSL
Sbjct: 537  NTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSL 596

Query: 1787 RKSMLKFNSKNRMLNVTKHSESQSCYLNREIVNLMSTLGVEDKAFLALQDVQLQILNAML 1608
            R SMLKF SKN+MLNVTK  +S  CYLNREI  L+STLGV+D++F ALQ  QL +L  ML
Sbjct: 597  RDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRML 656

Query: 1607 YSREDALTVLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXLRTRCRIF 1428
              ++ AL VL+     D  +ILV+ML  GYEPN EPY               LR+RCRIF
Sbjct: 657  TDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIF 716

Query: 1427 VSKGRILVGCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVTRN 1248
            V KGRIL+GCLDE+G+L+YGQVY  ITLTK+EL+SR   YF  +DET S+++GKVVVT+N
Sbjct: 717  VPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVTKN 776

Query: 1247 PCLHPGDVRVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDESL 1068
            PCLHPGDVRVLEA++ + L+EK   DC++FPQKG RPH NECSGGDLDGDLYFISWDE+L
Sbjct: 777  PCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENL 836

Query: 1067 VPPRTVTPMDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEKAL 888
            +PP+T  PMDYTGRRPR+MDHDV LEEI +FFVDYM +DTLGAISTAHLVHAD EP+KAL
Sbjct: 837  IPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKAL 896

Query: 887  SSKCLQLATLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYRAT 708
            S+KCL+LA LHSMAVDFAKTGAPAEMPRVLKPRE+PDFM R+DKPMYIS   LGKLYRA 
Sbjct: 897  SAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAA 956

Query: 707  KESELLQISASAFSATAIQDAYDQDLEVTGFEDFIEIAQTHKEMYLDSLTSLMNYYEAET 528
             +S   + S   +S  A +  YD DLEV GFE F+EIA+T+KEMY++ ++ LMNYY AE 
Sbjct: 957  VKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEY 1016

Query: 527  EDEILTGNIRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWLEGGCKAEDHHKLASA 348
            EDEIL G++R+++SYLQRDNR+YG+ KDRIL++++ L +E K W E  C   +   +ASA
Sbjct: 1017 EDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASA 1076

Query: 347  WYHVTYRADYGNGSSVKCLGFPWIVGHLLLEIKSINSR 234
            WYHVTY   Y     +    FPW V  +LL IK++NS+
Sbjct: 1077 WYHVTYHPSYFK-EDMFYFSFPWAVSDVLLNIKAMNSK 1113