BLASTX nr result

ID: Atractylodes21_contig00001422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001422
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   426   e-117
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   424   e-116
emb|CAN71460.1| hypothetical protein VITISV_033508 [Vitis vinifera]   424   e-116
ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   424   e-116
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   424   e-116

>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Glycine max]
          Length = 1270

 Score =  426 bits (1095), Expect = e-117
 Identities = 223/284 (78%), Positives = 239/284 (84%)
 Frame = +3

Query: 3    QRFWELAGSKLGDILGVEKTAEQIDADTAVVGEDGEVDFKEDAKFAQHLKKGDQAVSDFA 182
            QRFWELAGSKLGDILGVEKTAEQIDADTA VGEDGE+DFKE+AKF+QH+KKG+ AVSDFA
Sbjct: 502  QRFWELAGSKLGDILGVEKTAEQIDADTAEVGEDGEIDFKEEAKFSQHMKKGE-AVSDFA 560

Query: 183  KSKSLSQQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTXXXXXXXXXXXXXXXXXX 362
            KSK+L++QRQYLPIFSVR+ELLQV+RENQ     GETGSGKT                  
Sbjct: 561  KSKTLAEQRQYLPIFSVREELLQVVRENQVVVVVGETGSGKT------------------ 602

Query: 363  XXXXXXXXXXXXXXXXTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLG 542
                            TQLTQYLHEDGYT  GIVGCTQPRRVAAMSVAKRVSEEM+T+LG
Sbjct: 603  ----------------TQLTQYLHEDGYTIGGIVGCTQPRRVAAMSVAKRVSEEMDTELG 646

Query: 543  DLIGYAIRFEDVTGPKTVIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 722
            D +GYAIRFEDVTGPKT+IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG
Sbjct: 647  DKVGYAIRFEDVTGPKTIIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 706

Query: 723  ILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFFIPGRTFP 854
            ILKKVVA+RRDFKLIVTSATLNAQKFS+FFGSVPIF IPGRTFP
Sbjct: 707  ILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFP 750


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  424 bits (1091), Expect = e-116
 Identities = 223/284 (78%), Positives = 240/284 (84%)
 Frame = +3

Query: 3    QRFWELAGSKLGDILGVEKTAEQIDADTAVVGEDGEVDFKEDAKFAQHLKKGDQAVSDFA 182
            QRFWELAGSKLGDILGVEKTAEQIDADTAVVGE+GEVDFKEDAKFAQHLKK D+AVS+FA
Sbjct: 521  QRFWELAGSKLGDILGVEKTAEQIDADTAVVGEEGEVDFKEDAKFAQHLKK-DEAVSEFA 579

Query: 183  KSKSLSQQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTXXXXXXXXXXXXXXXXXX 362
            KSK+L++QRQYLPI+SVR+ELLQVIRENQ     GETGSGKT                  
Sbjct: 580  KSKTLAEQRQYLPIYSVREELLQVIRENQVVVVVGETGSGKT------------------ 621

Query: 363  XXXXXXXXXXXXXXXXTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLG 542
                            TQLTQYLHEDGYTT+GIVGCTQPRRVAAMSVAKRVSEEMET+LG
Sbjct: 622  ----------------TQLTQYLHEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMETELG 665

Query: 543  DLIGYAIRFEDVTGPKTVIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 722
            D +GYAIRFEDVTGP T IKYMTDGVL+RETLKDS+LDKYRV+VMDEAHERSL+TDVLFG
Sbjct: 666  DKVGYAIRFEDVTGPNTKIKYMTDGVLMRETLKDSELDKYRVVVMDEAHERSLNTDVLFG 725

Query: 723  ILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFFIPGRTFP 854
            ILKKVVA+RRDFKLIVTSATLNAQKFS+FFGSVPIF IPGRTFP
Sbjct: 726  ILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFP 769


>emb|CAN71460.1| hypothetical protein VITISV_033508 [Vitis vinifera]
          Length = 855

 Score =  424 bits (1091), Expect = e-116
 Identities = 223/284 (78%), Positives = 240/284 (84%)
 Frame = +3

Query: 3   QRFWELAGSKLGDILGVEKTAEQIDADTAVVGEDGEVDFKEDAKFAQHLKKGDQAVSDFA 182
           QRFWELAGSKLGDILGVEKTAEQIDADTAVVGE+GEVDFKEDAKFAQHLKK D+AVS+FA
Sbjct: 127 QRFWELAGSKLGDILGVEKTAEQIDADTAVVGEEGEVDFKEDAKFAQHLKK-DEAVSEFA 185

Query: 183 KSKSLSQQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTXXXXXXXXXXXXXXXXXX 362
           KSK+L++QRQYLPI+SVR+ELLQVIRENQ     GETGSGKT                  
Sbjct: 186 KSKTLAEQRQYLPIYSVREELLQVIRENQVVVVVGETGSGKT------------------ 227

Query: 363 XXXXXXXXXXXXXXXXTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLG 542
                           TQLTQYLHEDGYTT+GIVGCTQPRRVAAMSVAKRVSEEMET+LG
Sbjct: 228 ----------------TQLTQYLHEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMETELG 271

Query: 543 DLIGYAIRFEDVTGPKTVIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 722
           D +GYAIRFEDVTGP T IKYMTDGVL+RETLKDS+LDKYRV+VMDEAHERSL+TDVLFG
Sbjct: 272 DKVGYAIRFEDVTGPNTKIKYMTDGVLMRETLKDSELDKYRVVVMDEAHERSLNTDVLFG 331

Query: 723 ILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFFIPGRTFP 854
           ILKKVVA+RRDFKLIVTSATLNAQKFS+FFGSVPIF IPGRTFP
Sbjct: 332 ILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFP 375


>ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like, partial [Cucumis sativus]
          Length = 1178

 Score =  424 bits (1089), Expect = e-116
 Identities = 224/284 (78%), Positives = 238/284 (83%)
 Frame = +3

Query: 3    QRFWELAGSKLGDILGVEKTAEQIDADTAVVGEDGEVDFKEDAKFAQHLKKGDQAVSDFA 182
            QRFWELAGSKLGDILGVEKTAEQIDADTA VG++GEVDFKEDAKFAQH+KKG+ AVS+FA
Sbjct: 410  QRFWELAGSKLGDILGVEKTAEQIDADTAAVGDEGEVDFKEDAKFAQHMKKGE-AVSEFA 468

Query: 183  KSKSLSQQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTXXXXXXXXXXXXXXXXXX 362
            KSK+L+QQRQYLPI+SVRDELLQVIRENQ     GETGSGKT                  
Sbjct: 469  KSKTLAQQRQYLPIYSVRDELLQVIRENQVVVVVGETGSGKT------------------ 510

Query: 363  XXXXXXXXXXXXXXXXTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLG 542
                            TQLTQYL EDGYTT+GIVGCTQPRRVAAMSVAKRVSEEME DLG
Sbjct: 511  ----------------TQLTQYLFEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMECDLG 554

Query: 543  DLIGYAIRFEDVTGPKTVIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 722
            D +GYAIRFEDVTGP T+IKYMTDGVLLRETLKDSDL+KYRVIVMDEAHERSLSTDVLFG
Sbjct: 555  DKVGYAIRFEDVTGPSTIIKYMTDGVLLRETLKDSDLEKYRVIVMDEAHERSLSTDVLFG 614

Query: 723  ILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFFIPGRTFP 854
            ILKKVVA+RRDFKLIVTSATLNAQKFS+FFGSVPIF IPGRTFP
Sbjct: 615  ILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFP 658


>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Cucumis sativus]
          Length = 1298

 Score =  424 bits (1089), Expect = e-116
 Identities = 224/284 (78%), Positives = 238/284 (83%)
 Frame = +3

Query: 3    QRFWELAGSKLGDILGVEKTAEQIDADTAVVGEDGEVDFKEDAKFAQHLKKGDQAVSDFA 182
            QRFWELAGSKLGDILGVEKTAEQIDADTA VG++GEVDFKEDAKFAQH+KKG+ AVS+FA
Sbjct: 530  QRFWELAGSKLGDILGVEKTAEQIDADTAAVGDEGEVDFKEDAKFAQHMKKGE-AVSEFA 588

Query: 183  KSKSLSQQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTXXXXXXXXXXXXXXXXXX 362
            KSK+L+QQRQYLPI+SVRDELLQVIRENQ     GETGSGKT                  
Sbjct: 589  KSKTLAQQRQYLPIYSVRDELLQVIRENQVVVVVGETGSGKT------------------ 630

Query: 363  XXXXXXXXXXXXXXXXTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLG 542
                            TQLTQYL EDGYTT+GIVGCTQPRRVAAMSVAKRVSEEME DLG
Sbjct: 631  ----------------TQLTQYLFEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMECDLG 674

Query: 543  DLIGYAIRFEDVTGPKTVIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 722
            D +GYAIRFEDVTGP T+IKYMTDGVLLRETLKDSDL+KYRVIVMDEAHERSLSTDVLFG
Sbjct: 675  DKVGYAIRFEDVTGPSTIIKYMTDGVLLRETLKDSDLEKYRVIVMDEAHERSLSTDVLFG 734

Query: 723  ILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFFIPGRTFP 854
            ILKKVVA+RRDFKLIVTSATLNAQKFS+FFGSVPIF IPGRTFP
Sbjct: 735  ILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFP 778


Top