BLASTX nr result

ID: Atractylodes21_contig00001373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001373
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBX25323.1| hypothetical_protein [Oryza brachyantha]              114   7e-30
ref|XP_002284266.1| PREDICTED: 60S ribosomal protein L26-1 [Viti...   114   2e-29
emb|CBX25406.1| hypothetical_protein [Oryza brachyantha]              111   3e-29
tpg|DAA53543.1| TPA: ribosomal protein L26 [Zea mays]                 112   4e-29
ref|NP_001066165.1| Os12g0150100 [Oryza sativa Japonica Group] g...   110   4e-29

>emb|CBX25323.1| hypothetical_protein [Oryza brachyantha]
          Length = 153

 Score =  114 bits (286), Expect(2) = 7e-30
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +3

Query: 3   RKAHFSAPSSVRRVLMSAPLSTELRSKYNVRSVPVRKDDEVQVVRGTYKGREGKVVQVYR 182
           RKAHF+APSSVRRVLMSA LSTELRSKYNVRS+PVRKDDEVQVVRGTYKGREGKVVQVYR
Sbjct: 15  RKAHFTAPSSVRRVLMSAALSTELRSKYNVRSIPVRKDDEVQVVRGTYKGREGKVVQVYR 74



 Score = 42.4 bits (98), Expect(2) = 7e-30
 Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = +2

Query: 275 INASKVVITXXXXXXXXXXXXXXXXXGRAADKSKGKFTVDDV----AAGASLQ 421
           I+ SKVV+T                 GRAADK+KGKFT +DV    AAGASLQ
Sbjct: 98  IHPSKVVVTKLKLDKDRKAILDRKARGRAADKAKGKFTAEDVAAAGAAGASLQ 150


>ref|XP_002284266.1| PREDICTED: 60S ribosomal protein L26-1 [Vitis vinifera]
           gi|147769559|emb|CAN72392.1| hypothetical protein
           VITISV_032611 [Vitis vinifera]
           gi|147786955|emb|CAN73296.1| hypothetical protein
           VITISV_001956 [Vitis vinifera]
          Length = 151

 Score =  114 bits (284), Expect(2) = 2e-29
 Identities = 55/60 (91%), Positives = 60/60 (100%)
 Frame = +3

Query: 3   RKAHFSAPSSVRRVLMSAPLSTELRSKYNVRSVPVRKDDEVQVVRGTYKGREGKVVQVYR 182
           RKAHF+APSSVRRVLMSAPLST+LR+KYNVRSVP+RKDDEVQVVRGT+KGREGKVVQVYR
Sbjct: 15  RKAHFTAPSSVRRVLMSAPLSTDLRNKYNVRSVPIRKDDEVQVVRGTFKGREGKVVQVYR 74



 Score = 41.6 bits (96), Expect(2) = 2e-29
 Identities = 23/47 (48%), Positives = 26/47 (55%)
 Frame = +2

Query: 275 INASKVVITXXXXXXXXXXXXXXXXXGRAADKSKGKFTVDDVAAGAS 415
           IN SKVVI                  GRAADK+KGKFT +DVAA A+
Sbjct: 98  INPSKVVINKLKLDKDRKSLLDRKAKGRAADKAKGKFTAEDVAAAAA 144


>emb|CBX25406.1| hypothetical_protein [Oryza brachyantha]
          Length = 150

 Score =  111 bits (277), Expect(2) = 3e-29
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +3

Query: 3   RKAHFSAPSSVRRVLMSAPLSTELRSKYNVRSVPVRKDDEVQVVRGTYKGREGKVVQVYR 182
           RKAHF+APSSVRRVLMSA LS ELRSKYNVRS+PVRKDDEVQVVRG+YKGREGKVVQVYR
Sbjct: 15  RKAHFTAPSSVRRVLMSAALSAELRSKYNVRSIPVRKDDEVQVVRGSYKGREGKVVQVYR 74



 Score = 43.5 bits (101), Expect(2) = 3e-29
 Identities = 26/50 (52%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +2

Query: 275 INASKVVITXXXXXXXXXXXXXXXXXGRAADKSKGKFTVDDV-AAGASLQ 421
           I+ SKVV+T                 GRAADK+KGKFT +DV AAGASLQ
Sbjct: 98  IHPSKVVVTKLKLDKDRKAILDRKARGRAADKAKGKFTAEDVAAAGASLQ 147


>tpg|DAA53543.1| TPA: ribosomal protein L26 [Zea mays]
          Length = 157

 Score =  112 bits (279), Expect(2) = 4e-29
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +3

Query: 3   RKAHFSAPSSVRRVLMSAPLSTELRSKYNVRSVPVRKDDEVQVVRGTYKGREGKVVQVYR 182
           RKAHF+APSSVRRVLMSA LSTELR KYNVRS+P+RKDDEVQVVRGTYKGREGKVVQVYR
Sbjct: 15  RKAHFTAPSSVRRVLMSAGLSTELRHKYNVRSIPIRKDDEVQVVRGTYKGREGKVVQVYR 74



 Score = 42.4 bits (98), Expect(2) = 4e-29
 Identities = 22/47 (46%), Positives = 27/47 (57%)
 Frame = +2

Query: 275 INASKVVITXXXXXXXXXXXXXXXXXGRAADKSKGKFTVDDVAAGAS 415
           I+ SKV++T                 GRAADK+KGKFT DDVAA A+
Sbjct: 98  IHPSKVIVTKLKLDKDRKALLDRKARGRAADKAKGKFTADDVAAAAA 144


>ref|NP_001066165.1| Os12g0150100 [Oryza sativa Japonica Group] gi|315113264|pdb|3IZR|Y
           Chain Y, Localization Of The Large Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|77553015|gb|ABA95811.1| 60S
           ribosomal protein L26-1, putative, expressed [Oryza
           sativa Japonica Group] gi|113648672|dbj|BAF29184.1|
           Os12g0150100 [Oryza sativa Japonica Group]
           gi|125535782|gb|EAY82270.1| hypothetical protein
           OsI_37478 [Oryza sativa Indica Group]
           gi|125578511|gb|EAZ19657.1| hypothetical protein
           OsJ_35234 [Oryza sativa Japonica Group]
           gi|215740433|dbj|BAG97089.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|346703806|emb|CBX24474.1| hypothetical_protein [Oryza
           glaberrima]
          Length = 150

 Score =  110 bits (276), Expect(2) = 4e-29
 Identities = 54/60 (90%), Positives = 58/60 (96%)
 Frame = +3

Query: 3   RKAHFSAPSSVRRVLMSAPLSTELRSKYNVRSVPVRKDDEVQVVRGTYKGREGKVVQVYR 182
           RKAHF+APSSVRRVLMSA LSTELR KYNVRS+P+RKDDEVQVVRG+YKGREGKVVQVYR
Sbjct: 15  RKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRGSYKGREGKVVQVYR 74



 Score = 43.5 bits (101), Expect(2) = 4e-29
 Identities = 26/50 (52%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +2

Query: 275 INASKVVITXXXXXXXXXXXXXXXXXGRAADKSKGKFTVDDV-AAGASLQ 421
           I+ SKVV+T                 GRAADK+KGKFT +DV AAGASLQ
Sbjct: 98  IHPSKVVVTKLKLDKDRKAILDRKASGRAADKAKGKFTAEDVAAAGASLQ 147


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