BLASTX nr result

ID: Atractylodes21_contig00001349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001349
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   740   0.0  
ref|XP_002531166.1| dead box ATP-dependent RNA helicase, putativ...   732   0.0  
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   731   0.0  
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   732   0.0  
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   724   0.0  

>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 622

 Score =  740 bits (1911), Expect(2) = 0.0
 Identities = 375/410 (91%), Positives = 388/410 (94%), Gaps = 1/410 (0%)
 Frame = +2

Query: 2    GINFDAYEDIPVETSGVNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRYTIPISLA 181
            GINFDAYEDIPVETSG NVPPPVNTFAEIDLGEALN NIRRCKYVKPTPVQR+ IPISL+
Sbjct: 140  GINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLS 199

Query: 182  GRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRPRGFRTVFPLALILSPTRELSCQIHL 361
            G+DLMACAQTGSGKTAAFCFPIISGIM GQ  QRPRG RTV+PLALILSPTRELSCQIH 
Sbjct: 200  GKDLMACAQTGSGKTAAFCFPIISGIMTGQFAQRPRGARTVYPLALILSPTRELSCQIHD 259

Query: 362  EARKFAYQTGVKVVVVYGGAPINQQLRELERGVDILVATPGRLVDLLERAKVSLQMIRYL 541
            EARKF+YQTGVKVVV YGGAPINQQLRELERGVDILVATPGRLVDLLERA+VSLQMIRYL
Sbjct: 260  EARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYL 319

Query: 542  ALDEADRMLDMGFEPQIRKIVEQTDMPPPGGRQTMLFSATFPREIQRLASDFLSNYIFLT 721
            ALDEADRMLDMGFEPQIRKIVEQ DMPPPG RQTMLFSATFP+EIQRLASDFLS+YIFL 
Sbjct: 320  ALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSSYIFLA 379

Query: 722  VGRVGSSTDLIVQRVEFVQETDKRSHLMDLLHAQMDNGS-GKQPLTLVFVETKKGADSLE 898
            VGRVGSSTDLIVQRVEFV E+DKRSHLMDLLHAQ  NG+ GKQ LTLVFVETKKGADSLE
Sbjct: 380  VGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHGKQSLTLVFVETKKGADSLE 439

Query: 899  YWLCSNGFPATTIHGDRTQPERELALRSFKSGKTPILVATDVAARGLDIPHVSHVVNFDL 1078
            +WLC NGFPATTIHGDRTQ ERE ALRSFKSG TPILVATDVAARGLDIPHV+HVVNFDL
Sbjct: 440  HWLCMNGFPATTIHGDRTQQEREHALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDL 499

Query: 1079 PNDIDDYVHRIGRTGRAGKTGLATAFFNENNMSLAKPLADLMQEANQEVP 1228
            PNDIDDYVHRIGRTGRAGKTGLATAFFNENN SLA+PLADLMQEANQEVP
Sbjct: 500  PNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLADLMQEANQEVP 549



 Score = 53.9 bits (128), Expect(2) = 0.0
 Identities = 29/50 (58%), Positives = 30/50 (60%)
 Frame = +1

Query: 1288 EANQEVPAWLTRYASRPSYXXXXXXXXXXXXXXXXXDFRKENSFNRGNGA 1437
            EANQEVPAWLTRYASR SY                 DFRK+ SFNRG GA
Sbjct: 543  EANQEVPAWLTRYASRASY-GGGKNRRSGGGRFGGRDFRKDTSFNRGGGA 591


>ref|XP_002531166.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529236|gb|EEF31209.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 585

 Score =  732 bits (1889), Expect(2) = 0.0
 Identities = 372/410 (90%), Positives = 385/410 (93%), Gaps = 1/410 (0%)
 Frame = +2

Query: 2    GINFDAYEDIPVETSGVNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRYTIPISLA 181
            GINFDAYEDIPVETSG NVPPPVNTFAEIDLGEALN NIRRCKYVKPTPVQR  IPI LA
Sbjct: 105  GINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRNAIPIILA 164

Query: 182  GRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRPRGFRTVFPLALILSPTRELSCQIHL 361
            GRDLMACAQTGSGKTAAFCFPIISGIMR Q VQRPRG RTV+PLALILSPTRELSCQIH 
Sbjct: 165  GRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGPRTVYPLALILSPTRELSCQIHD 224

Query: 362  EARKFAYQTGVKVVVVYGGAPINQQLRELERGVDILVATPGRLVDLLERAKVSLQMIRYL 541
            EA+KF+YQTGVKVVV YGGAPINQQLRELERGVDILVATPGRLVDLLERA++SLQMIRYL
Sbjct: 225  EAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARISLQMIRYL 284

Query: 542  ALDEADRMLDMGFEPQIRKIVEQTDMPPPGGRQTMLFSATFPREIQRLASDFLSNYIFLT 721
            ALDEADRMLDMGFEPQIRKIVEQ DMPPPG RQTMLFSATFP+EIQRLASDFL++YIFL 
Sbjct: 285  ALDEADRMLDMGFEPQIRKIVEQMDMPPPGRRQTMLFSATFPKEIQRLASDFLASYIFLA 344

Query: 722  VGRVGSSTDLIVQRVEFVQETDKRSHLMDLLHAQMDNGSG-KQPLTLVFVETKKGADSLE 898
            VGRVGSSTDLIVQRVEFV ETDKRSHLMDLLHAQ +     K  LTLVFVETKKGADSLE
Sbjct: 345  VGRVGSSTDLIVQRVEFVHETDKRSHLMDLLHAQRETEINIKHSLTLVFVETKKGADSLE 404

Query: 899  YWLCSNGFPATTIHGDRTQPERELALRSFKSGKTPILVATDVAARGLDIPHVSHVVNFDL 1078
             WLC NGFPATTIHGDRTQ ERE+ALRSFKSGKTPILVATDVAARGLDIPHV+HVVNFDL
Sbjct: 405  NWLCVNGFPATTIHGDRTQQEREMALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDL 464

Query: 1079 PNDIDDYVHRIGRTGRAGKTGLATAFFNENNMSLAKPLADLMQEANQEVP 1228
            PNDIDDYVHRIGRTGRAGKTGLATAFFNENN+SLA+PLADLMQEANQEVP
Sbjct: 465  PNDIDDYVHRIGRTGRAGKTGLATAFFNENNLSLARPLADLMQEANQEVP 514



 Score = 47.8 bits (112), Expect(2) = 0.0
 Identities = 26/47 (55%), Positives = 27/47 (57%)
 Frame = +1

Query: 1288 EANQEVPAWLTRYASRPSYXXXXXXXXXXXXXXXXXDFRKENSFNRG 1428
            EANQEVPAWLTRYASR SY                 DFR+E SF RG
Sbjct: 508  EANQEVPAWLTRYASRASY-GGGKNRRTGGGRFGGRDFRREGSFGRG 553


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine max]
          Length = 619

 Score =  731 bits (1888), Expect(2) = 0.0
 Identities = 371/411 (90%), Positives = 388/411 (94%), Gaps = 2/411 (0%)
 Frame = +2

Query: 2    GINFDAYEDIPVETSGVNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRYTIPISLA 181
            GINFDAYEDIPVETSG NVPPPVNTFAEIDLGEALN NIRRCKYVKPTPVQR+ IPISLA
Sbjct: 136  GINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLA 195

Query: 182  GRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRP-RGFRTVFPLALILSPTRELSCQIH 358
            GRDLMACAQTGSGKTAAFCFPIISGIMRGQ VQRP RG RTV+PLAL+LSPTRELS QIH
Sbjct: 196  GRDLMACAQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRTVYPLALVLSPTRELSMQIH 255

Query: 359  LEARKFAYQTGVKVVVVYGGAPINQQLRELERGVDILVATPGRLVDLLERAKVSLQMIRY 538
             EARKF+YQTGV+VVV YGGAPINQQLR+LERGVDILVATPGRLVDLLERA+VSLQMIRY
Sbjct: 256  EEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRY 315

Query: 539  LALDEADRMLDMGFEPQIRKIVEQTDMPPPGGRQTMLFSATFPREIQRLASDFLSNYIFL 718
            LALDEADRMLDMGFEPQIRKIVEQ DMPPPG RQTMLFSATFP+EIQRLASDFLSNYIFL
Sbjct: 316  LALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKEIQRLASDFLSNYIFL 375

Query: 719  TVGRVGSSTDLIVQRVEFVQETDKRSHLMDLLHAQMDNG-SGKQPLTLVFVETKKGADSL 895
             VGRVGSSTDLIVQRVE+VQE+DKRSHLMDLLHAQ  NG  GKQ LTLVFVETKKGADSL
Sbjct: 376  AVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSL 435

Query: 896  EYWLCSNGFPATTIHGDRTQPERELALRSFKSGKTPILVATDVAARGLDIPHVSHVVNFD 1075
            E+WLC NGFPATTIHGDR+Q ERELALRSFKSG TPILVATDVAARGLDIPHV+HVVNFD
Sbjct: 436  EHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFD 495

Query: 1076 LPNDIDDYVHRIGRTGRAGKTGLATAFFNENNMSLAKPLADLMQEANQEVP 1228
            LPNDIDDYVHRIGRTGRAGK GLATAFFN+NN SLA+ L++LMQEANQEVP
Sbjct: 496  LPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSELMQEANQEVP 546



 Score = 44.3 bits (103), Expect(2) = 0.0
 Identities = 23/48 (47%), Positives = 29/48 (60%)
 Frame = +1

Query: 1288 EANQEVPAWLTRYASRPSYXXXXXXXXXXXXXXXXXDFRKENSFNRGN 1431
            EANQEVPAWL+RYA+R S+                 DFR+E SF+RG+
Sbjct: 540  EANQEVPAWLSRYAARSSF--GGGRNRRSGGRFGSRDFRREGSFSRGS 585


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine max]
          Length = 614

 Score =  732 bits (1890), Expect(2) = 0.0
 Identities = 371/411 (90%), Positives = 389/411 (94%), Gaps = 2/411 (0%)
 Frame = +2

Query: 2    GINFDAYEDIPVETSGVNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRYTIPISLA 181
            GINFDAYEDIPVETSG NVPPPVNTFAEIDLGEALN NIRRCKYV+PTPVQR+ IPISLA
Sbjct: 131  GINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVRPTPVQRHAIPISLA 190

Query: 182  GRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRP-RGFRTVFPLALILSPTRELSCQIH 358
            GRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRP RG RTV+PLAL+LSPTRELS QIH
Sbjct: 191  GRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRPPRGVRTVYPLALVLSPTRELSMQIH 250

Query: 359  LEARKFAYQTGVKVVVVYGGAPINQQLRELERGVDILVATPGRLVDLLERAKVSLQMIRY 538
             EARKF+YQTGV+VVV YGGAPINQQLR+LERGVDILVATPGRLVDLLERA+VSLQMIRY
Sbjct: 251  EEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRY 310

Query: 539  LALDEADRMLDMGFEPQIRKIVEQTDMPPPGGRQTMLFSATFPREIQRLASDFLSNYIFL 718
            LALDEADRMLDMGFEPQIRKIVEQ DMPPPG RQTMLFSATFP+EIQRLASDFLSNYIFL
Sbjct: 311  LALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKEIQRLASDFLSNYIFL 370

Query: 719  TVGRVGSSTDLIVQRVEFVQETDKRSHLMDLLHAQMDNG-SGKQPLTLVFVETKKGADSL 895
             VGRVGSSTDLIVQRVE+VQE+DKRSHLMDLLHAQ  NG  GKQ LTLVFVETKKGADSL
Sbjct: 371  AVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSL 430

Query: 896  EYWLCSNGFPATTIHGDRTQPERELALRSFKSGKTPILVATDVAARGLDIPHVSHVVNFD 1075
            E+WLC NGFPATTIHGDR+Q ERELALRSFKSG TPILVATDVAARGLDIPHV+HVVNFD
Sbjct: 431  EHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFD 490

Query: 1076 LPNDIDDYVHRIGRTGRAGKTGLATAFFNENNMSLAKPLADLMQEANQEVP 1228
            LPNDIDDYVHRIGRTGRAGK GLATAFFN+NN SLA+ L++LMQEANQEVP
Sbjct: 491  LPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSELMQEANQEVP 541



 Score = 41.6 bits (96), Expect(2) = 0.0
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = +1

Query: 1288 EANQEVPAWLTRYASRPSYXXXXXXXXXXXXXXXXXDFRKENSFNRGN 1431
            EANQEVPAWL+R+A+R S+                 DFR++ SF+RG+
Sbjct: 535  EANQEVPAWLSRFAARSSF--GGGRNRRSGGRFGGRDFRRDGSFSRGS 580


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
            gi|147854540|emb|CAN78578.1| hypothetical protein
            VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  724 bits (1869), Expect(2) = 0.0
 Identities = 368/411 (89%), Positives = 387/411 (94%), Gaps = 2/411 (0%)
 Frame = +2

Query: 2    GINFDAYEDIPVETSGVNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRYTIPISLA 181
            GINFDAYEDIPVETSG NVPPPVNTFAEIDLGEALN NI+RCKYVKPTPVQR+ IPISLA
Sbjct: 130  GINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIKRCKYVKPTPVQRHAIPISLA 189

Query: 182  GRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRP-RGFRTVFPLALILSPTRELSCQIH 358
            GRDLMACAQTGSGKTAAFCFPIISGIM+GQ+ QRP RG RTV+PLALILSPTRELSCQIH
Sbjct: 190  GRDLMACAQTGSGKTAAFCFPIISGIMKGQASQRPPRGARTVYPLALILSPTRELSCQIH 249

Query: 359  LEARKFAYQTGVKVVVVYGGAPINQQLRELERGVDILVATPGRLVDLLERAKVSLQMIRY 538
             EA+KF+YQTGVKVVV YGGAPI+QQLR+LERGVDILVATPGRLVDLLERA+VSLQMIRY
Sbjct: 250  DEAKKFSYQTGVKVVVAYGGAPISQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRY 309

Query: 539  LALDEADRMLDMGFEPQIRKIVEQTDMPPPGGRQTMLFSATFPREIQRLASDFLSNYIFL 718
            LALDEADRMLDMGFEPQIRKIVEQ DMPP G RQTMLFSATFP+EIQ+LASDFLSNY+FL
Sbjct: 310  LALDEADRMLDMGFEPQIRKIVEQMDMPPQGVRQTMLFSATFPKEIQKLASDFLSNYVFL 369

Query: 719  TVGRVGSSTDLIVQRVEFVQETDKRSHLMDLLHAQMDNG-SGKQPLTLVFVETKKGADSL 895
             VGRVGSSTDLIVQRVEFV +TDKRSHLMDLLHAQ  NG  GKQ LTLVFVETKKGADSL
Sbjct: 370  AVGRVGSSTDLIVQRVEFVHDTDKRSHLMDLLHAQRANGVHGKQYLTLVFVETKKGADSL 429

Query: 896  EYWLCSNGFPATTIHGDRTQPERELALRSFKSGKTPILVATDVAARGLDIPHVSHVVNFD 1075
            E+WLC NGFPATTIHGDRTQ ERE ALRSFKSG TPILVATDVAARGLDIPHV+HVVNFD
Sbjct: 430  EHWLCMNGFPATTIHGDRTQQEREQALRSFKSGVTPILVATDVAARGLDIPHVAHVVNFD 489

Query: 1076 LPNDIDDYVHRIGRTGRAGKTGLATAFFNENNMSLAKPLADLMQEANQEVP 1228
            LPNDIDDYVHRIGRTGRAGKTGLATAFFN+NN SLAK L++LMQEANQEVP
Sbjct: 490  LPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSLAKALSELMQEANQEVP 540



 Score = 43.5 bits (101), Expect(2) = 0.0
 Identities = 23/47 (48%), Positives = 27/47 (57%)
 Frame = +1

Query: 1288 EANQEVPAWLTRYASRPSYXXXXXXXXXXXXXXXXXDFRKENSFNRG 1428
            EANQEVPAWL+RYA+R  Y                 DFR++ SFNRG
Sbjct: 534  EANQEVPAWLSRYAARSPY-VGRNRRSGGGGRFGGRDFRRDASFNRG 579


Top