BLASTX nr result

ID: Atractylodes21_contig00001339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001339
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like ...   208   2e-51
ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...   204   5e-50
ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-48
ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|2...   195   2e-47
ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like ...   190   8e-46

>ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like [Cucumis sativus]
           gi|449528792|ref|XP_004171387.1| PREDICTED: RING-H2
           finger protein ATL7-like [Cucumis sativus]
          Length = 218

 Score =  208 bits (530), Expect = 2e-51
 Identities = 110/222 (49%), Positives = 139/222 (62%), Gaps = 14/222 (6%)
 Frame = -3

Query: 907 LMTPGINLVMTVIGFTVSTMFIVFVCTRLICARIHYIXXXXXXXXXXXSDLNALERGIRG 728
           +M+ G+NLVMTVIGFTVST+FIVFVCTRL+CARIH             SDL+ LERG+ G
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 727 AEPLVAASFPTKKYSDPFFSYAKDAQCVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQ 548
            EP+V A+FPTKKYSD +FS  ++AQC VCL+DYH++D LRILP+CGH FH  CIDIWL 
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 547 QHCTCPVCRVSLREVFERRYSMQPMXXXXXXXXXXXXXXSHRTDPSNDGQLQSNDNEQEA 368
           QH TCPVCR+SLREV +++ +MQP+                R  P  D  L++N  EQ  
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPC---RGFPLRD--LENNGLEQPI 175

Query: 367 RQNNSNMNENSST--------------GSKNPVNKQFESPSD 284
           ++N+     N +                SK   NK  ESPS+
Sbjct: 176 QENHYTTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSN 217


>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score =  204 bits (518), Expect = 5e-50
 Identities = 109/228 (47%), Positives = 138/228 (60%), Gaps = 20/228 (8%)
 Frame = -3

Query: 907 LMTPGINLVMTVIGFTVSTMFIVFVCTRLICARIHYIXXXXXXXXXXXSDLNALERGIRG 728
           +++ G+NLVMTVIGF VSTMFIVFVCTRL+CARI              SDL+ LERG+ G
Sbjct: 1   MISGGVNLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHG 60

Query: 727 AEPLVAASFPTKKYSDPFFSYAKDAQCVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQ 548
            EP V A+FPTKK++D FFS A+DAQC VCL +Y A+D LRILP+CGHFFH TCIDIWLQ
Sbjct: 61  LEPAVVANFPTKKFADEFFSPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQ 120

Query: 547 QHCTCPVCRVSLREVFERRYSMQPM--------------------XXXXXXXXXXXXXXS 428
           QH TCPVCR+SL E  ER+  MQPM                                  +
Sbjct: 121 QHSTCPVCRISLWEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDN 180

Query: 427 HRTDPSNDGQLQSNDNEQEARQNNSNMNENSSTGSKNPVNKQFESPSD 284
           HR DP  + Q     +  EA+++   + + ++  +K+  NK  ESPS+
Sbjct: 181 HRMDPIQEDQFGPGGDGAEAQESTLPLTD-ANQPAKDSENKHIESPSN 227


>ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  199 bits (507), Expect = 1e-48
 Identities = 94/145 (64%), Positives = 112/145 (77%)
 Frame = -3

Query: 907 LMTPGINLVMTVIGFTVSTMFIVFVCTRLICARIHYIXXXXXXXXXXXSDLNALERGIRG 728
           +M  GINLVMTVIGF+VSTMFIVFVCTRLICARI              SDL+ LERG+ G
Sbjct: 1   MMASGINLVMTVIGFSVSTMFIVFVCTRLICARIQLNASRRSFRIASRSDLSMLERGLHG 60

Query: 727 AEPLVAASFPTKKYSDPFFSYAKDAQCVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQ 548
            EP+V ASFPTKKY+D  FS ++DAQC VCL++YH  D LRILP+CGH FH TCID+WLQ
Sbjct: 61  LEPVVIASFPTKKYNDKLFSASEDAQCTVCLAEYHGKDILRILPYCGHSFHVTCIDMWLQ 120

Query: 547 QHCTCPVCRVSLREVFERRYSMQPM 473
           QH TCP+CR+SLRE  E++ +MQP+
Sbjct: 121 QHSTCPMCRISLREFPEKKCAMQPL 145


>ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|222850859|gb|EEE88406.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  195 bits (496), Expect = 2e-47
 Identities = 106/228 (46%), Positives = 136/228 (59%), Gaps = 20/228 (8%)
 Frame = -3

Query: 907 LMTPGINLVMTVIGFTVSTMFIVFVCTRLICARIHYIXXXXXXXXXXXSDLNALERGIRG 728
           ++  GINLVMTVIGF VSTMFIVFVCTRL+CARI              S+L+ LERG  G
Sbjct: 1   MIASGINLVMTVIGFGVSTMFIVFVCTRLLCARIQMNASRRAFPIASRSNLSLLERG--G 58

Query: 727 AEPLVAASFPTKKYSDPFFSYAKDAQCVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQ 548
            E +  A+FPTKKY+D  FS ++DAQC +CL++YH DD LRILP+CGH FH TCIDIWLQ
Sbjct: 59  LEHVFLANFPTKKYNDKIFSASEDAQCTICLAEYHGDDILRILPYCGHSFHVTCIDIWLQ 118

Query: 547 QHCTCPVCRVSLREVFERRYSMQPM--------------------XXXXXXXXXXXXXXS 428
           QH TCPVCR+SLRE  E++  MQP+                                  +
Sbjct: 119 QHSTCPVCRISLREFPEKKRVMQPLFSSAIRSRNGTETFDSHSYNYMLTEHGISPRSYNN 178

Query: 427 HRTDPSNDGQLQSNDNEQEARQNNSNMNENSSTGSKNPVNKQFESPSD 284
           H TDP  D    S  +E+E  +N+  + E++   +K+  +K  ESPS+
Sbjct: 179 HGTDPIQDNHCASGGDEEEGGENSPPLTESNQI-AKDIADKHVESPSN 225


>ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 229

 Score =  190 bits (482), Expect = 8e-46
 Identities = 90/145 (62%), Positives = 109/145 (75%)
 Frame = -3

Query: 907 LMTPGINLVMTVIGFTVSTMFIVFVCTRLICARIHYIXXXXXXXXXXXSDLNALERGIRG 728
           +++ GINLVMTVIGF VSTMFIVFVCTRLICARIH             S+L+ +ERG  G
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHMNTARRSFPIASRSNLSMMERGCHG 60

Query: 727 AEPLVAASFPTKKYSDPFFSYAKDAQCVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQ 548
            E +  A FPTKKYSD FF+ A+++QC VCLS+Y  +D LRILP+CGH FH TCID+WLQ
Sbjct: 61  LERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQ 120

Query: 547 QHCTCPVCRVSLREVFERRYSMQPM 473
           Q+ TCPVCR+SLRE  ER+  MQP+
Sbjct: 121 QNSTCPVCRISLREFPERKLLMQPL 145


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