BLASTX nr result

ID: Atractylodes21_contig00001330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001330
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622373.1| Eukaryotic translation initiation factor [Me...   196   2e-48
ref|XP_003562588.1| PREDICTED: eukaryotic translation initiation...   194   5e-48
ref|NP_001060417.1| Os07g0639800 [Oryza sativa Japonica Group] g...   192   2e-47
ref|XP_002876316.1| EMB1624 [Arabidopsis lyrata subsp. lyrata] g...   192   2e-47
ref|NP_191121.1| Translation initiation factor IF6 [Arabidopsis ...   192   2e-47

>ref|XP_003622373.1| Eukaryotic translation initiation factor [Medicago truncatula]
           gi|355497388|gb|AES78591.1| Eukaryotic translation
           initiation factor [Medicago truncatula]
          Length = 489

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/109 (86%), Positives = 102/109 (93%)
 Frame = -3

Query: 329 NFCLLLFSKMATRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKT 150
           +FCL   S MATRLQFENSCE+GVFSKLTNAYCLVAIGGSENFYS FE+EL+DVIPV+KT
Sbjct: 236 HFCLSSLSVMATRLQFENSCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELSDVIPVIKT 295

Query: 149 SIGGTRIIGRLCIGNKNGLLLPHTTTDQELQHLRNSLPDAVVVQRIDER 3
           SIGGTRI+GRLCIGNKNGLLLPHTTTDQELQHL+NSLPD V VQRI+ER
Sbjct: 296 SIGGTRIVGRLCIGNKNGLLLPHTTTDQELQHLKNSLPDRVCVQRIEER 344



 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/100 (82%), Positives = 91/100 (91%)
 Frame = -3

Query: 302 MATRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 123
           MATRLQ+ENSCEIG FSKLTNAYCL AIGGS NFYS FE+ELAD+IPVVKTSI  TR++G
Sbjct: 1   MATRLQYENSCEIGAFSKLTNAYCLTAIGGSANFYSAFEAELADIIPVVKTSIASTRLVG 60

Query: 122 RLCIGNKNGLLLPHTTTDQELQHLRNSLPDAVVVQRIDER 3
            L +GNKNGLLLPHTTTDQELQHLRNSLPD V+VQRI+E+
Sbjct: 61  LLSVGNKNGLLLPHTTTDQELQHLRNSLPDHVLVQRIEEK 100


>ref|XP_003562588.1| PREDICTED: eukaryotic translation initiation factor 6-2-like
           [Brachypodium distachyon]
          Length = 245

 Score =  194 bits (494), Expect = 5e-48
 Identities = 94/100 (94%), Positives = 98/100 (98%)
 Frame = -3

Query: 302 MATRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 123
           MATR+QFEN+CE+GVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG
Sbjct: 1   MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 60

Query: 122 RLCIGNKNGLLLPHTTTDQELQHLRNSLPDAVVVQRIDER 3
           RLC+GNKNGLLLPHTTTDQELQHLRN LPD VVVQRIDER
Sbjct: 61  RLCVGNKNGLLLPHTTTDQELQHLRNCLPDQVVVQRIDER 100


>ref|NP_001060417.1| Os07g0639800 [Oryza sativa Japonica Group]
           gi|27261099|dbj|BAC45212.1| putative eukaryotic
           translation initiation factor 6 [Oryza sativa Japonica
           Group] gi|113611953|dbj|BAF22331.1| Os07g0639800 [Oryza
           sativa Japonica Group] gi|125559329|gb|EAZ04865.1|
           hypothetical protein OsI_27044 [Oryza sativa Indica
           Group] gi|125601250|gb|EAZ40826.1| hypothetical protein
           OsJ_25302 [Oryza sativa Japonica Group]
           gi|215704327|dbj|BAG93761.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737685|dbj|BAG96815.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737788|dbj|BAG96918.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 245

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/100 (93%), Positives = 97/100 (97%)
 Frame = -3

Query: 302 MATRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 123
           MATR+QFEN+CE+GVFSKLTNAYCLVAIGGSENFYS FESELADVIPVVKTSIGGTRIIG
Sbjct: 1   MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPVVKTSIGGTRIIG 60

Query: 122 RLCIGNKNGLLLPHTTTDQELQHLRNSLPDAVVVQRIDER 3
           RLC+GNKNGLLLPHTTTDQELQHLRN LPD VVVQRIDER
Sbjct: 61  RLCVGNKNGLLLPHTTTDQELQHLRNCLPDQVVVQRIDER 100


>ref|XP_002876316.1| EMB1624 [Arabidopsis lyrata subsp. lyrata]
           gi|297322154|gb|EFH52575.1| EMB1624 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 245

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/100 (93%), Positives = 97/100 (97%)
 Frame = -3

Query: 302 MATRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 123
           MATRLQFEN+CE+GVFSKLTNAYCLVAIGGSENFYS FESELADVIP+VKTSIGGTRIIG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIG 60

Query: 122 RLCIGNKNGLLLPHTTTDQELQHLRNSLPDAVVVQRIDER 3
           RLC GNKNGLL+PHTTTDQELQHLRNSLPD VVVQRIDER
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDER 100


>ref|NP_191121.1| Translation initiation factor IF6 [Arabidopsis thaliana]
           gi|75181414|sp|Q9M060.1|IF62_ARATH RecName:
           Full=Eukaryotic translation initiation factor 6-2;
           Short=AteIF-6;2 gi|7263550|emb|CAB81587.1| eukaryotic
           translation initiation factor 6 (EIF-6)-like protein
           [Arabidopsis thaliana] gi|22135944|gb|AAM91554.1|
           eukaryotic translation initiation factor 6 (EIF-6)-like
           protein [Arabidopsis thaliana]
           gi|32189303|gb|AAP75806.1| At3g55620 [Arabidopsis
           thaliana] gi|332645889|gb|AEE79410.1| Translation
           initiation factor IF6 [Arabidopsis thaliana]
          Length = 245

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/100 (93%), Positives = 97/100 (97%)
 Frame = -3

Query: 302 MATRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 123
           MATRLQFEN+CE+GVFSKLTNAYCLVAIGGSENFYS FESELADVIP+VKTSIGGTRIIG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIG 60

Query: 122 RLCIGNKNGLLLPHTTTDQELQHLRNSLPDAVVVQRIDER 3
           RLC GNKNGLL+PHTTTDQELQHLRNSLPD VVVQRIDER
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDER 100


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