BLASTX nr result

ID: Atractylodes21_contig00001312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001312
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886457.1| ATSCO1/ATSCO1/CPEF-G [Arabidopsis lyrata sub...   502   e-140
ref|XP_004162669.1| PREDICTED: LOW QUALITY PROTEIN: elongation f...   499   e-139
ref|XP_004147612.1| PREDICTED: elongation factor G, chloroplasti...   499   e-139
ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana] g...   499   e-139
dbj|BAD95114.1| elongation factor G [Arabidopsis thaliana]            499   e-139

>ref|XP_002886457.1| ATSCO1/ATSCO1/CPEF-G [Arabidopsis lyrata subsp. lyrata]
            gi|297332298|gb|EFH62716.1| ATSCO1/ATSCO1/CPEF-G
            [Arabidopsis lyrata subsp. lyrata]
          Length = 782

 Score =  502 bits (1292), Expect = e-140
 Identities = 260/330 (78%), Positives = 280/330 (84%), Gaps = 6/330 (1%)
 Frame = +2

Query: 140  CNFSGTNGASSTTPLRR---FLLSPATSLRRHHHRTLTSS---FFGTQRLTPNKSTSHFH 301
            CN +G+       PL     FL  P     R    +++SS   F GT R+    S    H
Sbjct: 18   CNLNGSQRRPVLLPLSHRPTFLGLPP----RASSSSISSSIPQFLGTSRIGLGSSKLS-H 72

Query: 302  KRNLSVFAMAAGPEDGKRAVPLKDYRNIGIMAHIDAGKTTTTERVLYYTGRNYKIGEVHE 481
            K+  SVFA A G  + KRAVPLKDYRNIGIMAHIDAGKTTTTER+LYYTGRNYKIGEVHE
Sbjct: 73   KKKFSVFAAAEG--EAKRAVPLKDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHE 130

Query: 482  GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL 661
            GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL
Sbjct: 131  GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL 190

Query: 662  FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVSNLGAKPLVLQIP 841
            FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIV+NLGAKPLVLQIP
Sbjct: 191  FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQIP 250

Query: 842  IGSEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPSDLQELAEEYRALMIETIVELDDE 1021
            IG+EDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIP+DL++LA+EYRA M+E IV+LDDE
Sbjct: 251  IGAEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPADLEDLAQEYRAAMMELIVDLDDE 310

Query: 1022 VMEGYLEGVEPDEETIKKLIRKGTIAGNFV 1111
            VME YLEGVEPDE T+K+L+RKGTI G FV
Sbjct: 311  VMENYLEGVEPDEATVKRLVRKGTITGKFV 340


>ref|XP_004162669.1| PREDICTED: LOW QUALITY PROTEIN: elongation factor G,
            chloroplastic-like [Cucumis sativus]
          Length = 777

 Score =  499 bits (1285), Expect = e-139
 Identities = 261/333 (78%), Positives = 284/333 (85%), Gaps = 9/333 (2%)
 Frame = +2

Query: 140  CNFSGTNGA-SSTTPLRR--FLLSPATSLRRHHHRTLTSSFFGTQ-RLTPNKSTSHFHKR 307
            CNF+G+    ++ TPL R  FLL  +   R H        FFGT  RLT + S++    R
Sbjct: 13   CNFNGSQRRPAAPTPLSRTQFLLRSSRPSRSH--------FFGTNLRLTSSPSSNLCISR 64

Query: 308  -----NLSVFAMAAGPEDGKRAVPLKDYRNIGIMAHIDAGKTTTTERVLYYTGRNYKIGE 472
                 NLSVFAMAA  EDGKR+VPL+DYRNIGIMAHIDAGKTTTTER+LYYTGRNYKIGE
Sbjct: 65   QQSRPNLSVFAMAA--EDGKRSVPLEDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGE 122

Query: 473  VHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGA 652
            VHEG ATMDWMEQE+ERGITITSAATTTFW+KHRINIIDTPGHVDFTLEVERALRVLDGA
Sbjct: 123  VHEGAATMDWMEQEKERGITITSAATTTFWNKHRINIIDTPGHVDFTLEVERALRVLDGA 182

Query: 653  ICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVSNLGAKPLVL 832
            ICLFDSVAGVEPQSETVWRQADKYGVPRICF+NKMDRLGANFFRTRDMIV+NLGAKPLVL
Sbjct: 183  ICLFDSVAGVEPQSETVWRQADKYGVPRICFINKMDRLGANFFRTRDMIVTNLGAKPLVL 242

Query: 833  QIPIGSEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPSDLQELAEEYRALMIETIVEL 1012
            Q+PIGSED FKGVVDLVRMKAIVWSGEELGAKF YEDIP DL +LA++YR+ MIET+VEL
Sbjct: 243  QLPIGSEDNFKGVVDLVRMKAIVWSGEELGAKFQYEDIPEDLVDLAQDYRSQMIETVVEL 302

Query: 1013 DDEVMEGYLEGVEPDEETIKKLIRKGTIAGNFV 1111
            DDE ME YLEG+EPDE TIKKLIRKG I+  FV
Sbjct: 303  DDEAMENYLEGIEPDEATIKKLIRKGAISACFV 335


>ref|XP_004147612.1| PREDICTED: elongation factor G, chloroplastic-like [Cucumis sativus]
          Length = 777

 Score =  499 bits (1285), Expect = e-139
 Identities = 261/333 (78%), Positives = 284/333 (85%), Gaps = 9/333 (2%)
 Frame = +2

Query: 140  CNFSGTNGA-SSTTPLRR--FLLSPATSLRRHHHRTLTSSFFGTQ-RLTPNKSTSHFHKR 307
            CNF+G+    ++ TPL R  FLL  +   R H        FFGT  RLT + S++    R
Sbjct: 13   CNFNGSQRRPAAPTPLSRTQFLLRSSRPSRSH--------FFGTNLRLTSSPSSNLCISR 64

Query: 308  -----NLSVFAMAAGPEDGKRAVPLKDYRNIGIMAHIDAGKTTTTERVLYYTGRNYKIGE 472
                 NLSVFAMAA  EDGKR+VPL+DYRNIGIMAHIDAGKTTTTER+LYYTGRNYKIGE
Sbjct: 65   QQSRPNLSVFAMAA--EDGKRSVPLEDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGE 122

Query: 473  VHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGA 652
            VHEG ATMDWMEQE+ERGITITSAATTTFW+KHRINIIDTPGHVDFTLEVERALRVLDGA
Sbjct: 123  VHEGAATMDWMEQEKERGITITSAATTTFWNKHRINIIDTPGHVDFTLEVERALRVLDGA 182

Query: 653  ICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVSNLGAKPLVL 832
            ICLFDSVAGVEPQSETVWRQADKYGVPRICF+NKMDRLGANFFRTRDMIV+NLGAKPLVL
Sbjct: 183  ICLFDSVAGVEPQSETVWRQADKYGVPRICFINKMDRLGANFFRTRDMIVTNLGAKPLVL 242

Query: 833  QIPIGSEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPSDLQELAEEYRALMIETIVEL 1012
            Q+PIGSED FKGVVDLVRMKAIVWSGEELGAKF YEDIP DL +LA++YR+ MIET+VEL
Sbjct: 243  QLPIGSEDNFKGVVDLVRMKAIVWSGEELGAKFQYEDIPEDLVDLAQDYRSQMIETVVEL 302

Query: 1013 DDEVMEGYLEGVEPDEETIKKLIRKGTIAGNFV 1111
            DDE ME YLEG+EPDE TIKKLIRKG I+  FV
Sbjct: 303  DDEAMENYLEGIEPDEATIKKLIRKGAISACFV 335


>ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana]
            gi|6630460|gb|AAF19548.1|AC007190_16 F23N19.11
            [Arabidopsis thaliana] gi|23297147|gb|AAN13104.1| unknown
            protein [Arabidopsis thaliana]
            gi|90855593|tpg|DAA05753.1| TPA_exp: elongation factor G
            [Arabidopsis thaliana] gi|332195879|gb|AEE34000.1|
            elongation factor EF-G [Arabidopsis thaliana]
          Length = 783

 Score =  499 bits (1285), Expect = e-139
 Identities = 258/330 (78%), Positives = 277/330 (83%), Gaps = 6/330 (1%)
 Frame = +2

Query: 140  CNFSGTNGASSTTPLRR---FLLSPATSLRRHHHRTLTSS---FFGTQRLTPNKSTSHFH 301
            CN +G+       PL     FL  P     R    +++SS   F GT R+    S     
Sbjct: 18   CNLNGSQRRPVLLPLSHRATFLGLPP----RASSSSISSSIPQFLGTSRIGLGSSKLSQK 73

Query: 302  KRNLSVFAMAAGPEDGKRAVPLKDYRNIGIMAHIDAGKTTTTERVLYYTGRNYKIGEVHE 481
            K+  SVFA A    + KRAVPLKDYRNIGIMAHIDAGKTTTTER+LYYTGRNYKIGEVHE
Sbjct: 74   KKQFSVFAAAEA--EAKRAVPLKDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHE 131

Query: 482  GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL 661
            GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL
Sbjct: 132  GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL 191

Query: 662  FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVSNLGAKPLVLQIP 841
            FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIV+NLGAKPLVLQIP
Sbjct: 192  FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQIP 251

Query: 842  IGSEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPSDLQELAEEYRALMIETIVELDDE 1021
            IG+EDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIP DL++LA+EYRA M+E IV+LDDE
Sbjct: 252  IGAEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPEDLEDLAQEYRAAMMELIVDLDDE 311

Query: 1022 VMEGYLEGVEPDEETIKKLIRKGTIAGNFV 1111
            VME YLEGVEPDE T+K+L+RKGTI G FV
Sbjct: 312  VMENYLEGVEPDEATVKRLVRKGTITGKFV 341


>dbj|BAD95114.1| elongation factor G [Arabidopsis thaliana]
          Length = 434

 Score =  499 bits (1285), Expect = e-139
 Identities = 258/330 (78%), Positives = 277/330 (83%), Gaps = 6/330 (1%)
 Frame = +2

Query: 140  CNFSGTNGASSTTPLRR---FLLSPATSLRRHHHRTLTSS---FFGTQRLTPNKSTSHFH 301
            CN +G+       PL     FL  P     R    +++SS   F GT R+    S     
Sbjct: 18   CNLNGSQRRPVLLPLSHRATFLGLPP----RASSSSISSSIPQFLGTSRIGLGSSKLSQK 73

Query: 302  KRNLSVFAMAAGPEDGKRAVPLKDYRNIGIMAHIDAGKTTTTERVLYYTGRNYKIGEVHE 481
            K+  SVFA A    + KRAVPLKDYRNIGIMAHIDAGKTTTTER+LYYTGRNYKIGEVHE
Sbjct: 74   KKQFSVFAAAEA--EAKRAVPLKDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHE 131

Query: 482  GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL 661
            GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL
Sbjct: 132  GTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICL 191

Query: 662  FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVSNLGAKPLVLQIP 841
            FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIV+NLGAKPLVLQIP
Sbjct: 192  FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQIP 251

Query: 842  IGSEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPSDLQELAEEYRALMIETIVELDDE 1021
            IG+EDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIP DL++LA+EYRA M+E IV+LDDE
Sbjct: 252  IGAEDVFKGVVDLVRMKAIVWSGEELGAKFSYEDIPEDLEDLAQEYRAAMMELIVDLDDE 311

Query: 1022 VMEGYLEGVEPDEETIKKLIRKGTIAGNFV 1111
            VME YLEGVEPDE T+K+L+RKGTI G FV
Sbjct: 312  VMENYLEGVEPDEATVKRLVRKGTITGKFV 341


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