BLASTX nr result
ID: Atractylodes21_contig00001161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00001161
(1105 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa... 276 3e-78
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop... 278 1e-77
ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2... 266 2e-74
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo] 262 1e-73
ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm... 265 3e-73
>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Vitis vinifera]
Length = 560
Score = 276 bits (707), Expect(2) = 3e-78
Identities = 153/273 (56%), Positives = 181/273 (66%), Gaps = 22/273 (8%)
Frame = -2
Query: 861 SRLQYHVMLWKPATPVYPKFIQEALEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVK 682
+R QY VMLWKPA PVYPK IQEA EGLTK EADELRMKG NL PIC+L KNGVYI+LVK
Sbjct: 287 TRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGXNLIPICRLVKNGVYISLVK 346
Query: 681 DVRQAIEESSLVKIDCRGMHASDFKKLGAKLKELVPCVLLSFDDEQILIWRGRGWKSMYH 502
DVR A E S LVKIDC+GMHASD+KK+GAKLKE VPCVLLSFDDEQIL WRG GWKSMY
Sbjct: 347 DVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILTWRGHGWKSMYQ 406
Query: 501 GAPISSTPTFDNIANDPSCSENTEVGLYKSET-------RMMSLWRRAIESNKAMLPEDI 343
GAP P ++A+ S + ++ +T +MMSLW+ AIES+KA+L ++I
Sbjct: 407 GAPSFLIPVVADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDEI 466
Query: 342 GLAPDDLLKVVEEFEAVSLVTEHSYHAVIVSNEE-------------TRXXXXXXXXXXX 202
GL PD LLKVVEEFE +S TEHSY A+++S+E+ +
Sbjct: 467 GLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHEGYNSEDYSEDEMYNDD 526
Query: 201 XXXXXXYGELSEKSSPP--GSLPVDFLAEQLSD 109
L E SP GSLPVD LA+QL +
Sbjct: 527 DDEYLVNESLEEMESPVPLGSLPVDLLAKQLGE 559
Score = 42.7 bits (99), Expect(2) = 3e-78
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = -3
Query: 1007 WTGGVGFVSKEMIQEHLPFPAFDIKEKTGGTIILPTGGVLYLFRGRHYD 861
W GV + + + HL +EKTGG II GGV+YLFRGR+Y+
Sbjct: 243 WCKGVPTIDMDNVCHHL-------EEKTGGKIIHRVGGVVYLFRGRNYN 284
>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
gi|297739063|emb|CBI28552.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 278 bits (711), Expect(2) = 1e-77
Identities = 155/274 (56%), Positives = 184/274 (67%), Gaps = 23/274 (8%)
Frame = -2
Query: 861 SRLQYHVMLWKPATPVYPKFIQEALEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVK 682
+R QY VMLWKPA PVYPK IQEA EGLTK EADELRMKGKNL PIC+L KNGVYI+LVK
Sbjct: 287 TRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYISLVK 346
Query: 681 DVRQAIEESSLVKIDCRGMHASDFKKLGAKLKELVPCVLLSFDDEQILIWRGRGWKSMYH 502
DVR A E S LVKIDC+GMHASD+KK+GAKLKELVPCVLLSFDDEQIL WRG GWKSMY
Sbjct: 347 DVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGWKSMYQ 406
Query: 501 GAPISSTPTFDNIANDPSCSENTEVGLYKSET-------RMMSLWRRAIESNKAMLPEDI 343
GAP P ++A+ S + ++ +T +MMSLW+ AIES+KA+L ++
Sbjct: 407 GAPSFLIPVVADVASGLEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDET 466
Query: 342 GLAPDDLLKVVEEFEAVSLVTEHSYHAVIVSNEE----TRXXXXXXXXXXXXXXXXXYGE 175
GL PD LLKVVEEFE +S TEHSY A+++S+E+ T+ +
Sbjct: 467 GLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEYEGYNSEDYSEDEMYNDD 526
Query: 174 ----------LSEKSSPP--GSLPVDFLAEQLSD 109
L E SP GSLPVD LA+QL +
Sbjct: 527 DDDEYLVNESLEEMESPVPLGSLPVDLLAKQLGE 560
Score = 39.7 bits (91), Expect(2) = 1e-77
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 938 IKEKTGGTIILPTGGVLYLFRGRHYD 861
++EKTGG II GGV+YLFRGR+Y+
Sbjct: 259 LEEKTGGKIIHRVGGVVYLFRGRNYN 284
>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
predicted protein [Populus trichocarpa]
Length = 506
Score = 266 bits (681), Expect(2) = 2e-74
Identities = 148/272 (54%), Positives = 180/272 (66%), Gaps = 23/272 (8%)
Frame = -2
Query: 861 SRLQYHVMLWKPATPVYPKFIQEALEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVK 682
+R QY VMLWKPATPVYPK IQEA EGLTK +ADE R KGKNL PICKLAKNGVYITLV+
Sbjct: 233 TRPQYPVMLWKPATPVYPKLIQEAPEGLTKAQADEFRKKGKNLLPICKLAKNGVYITLVR 292
Query: 681 DVRQAIEESSLVKIDCRGMHASDFKKLGAKLKELVPCVLLSFDDEQILIWRGRGWKSMYH 502
DVR A E S LVK+DC+GM SD+KKLGAKLK+LVPCVLLSFDDEQIL+WRG+ WKSMY
Sbjct: 293 DVRAAFEGSPLVKVDCKGMEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGQDWKSMYP 352
Query: 501 GA-PISSTPTFDNIA--------NDPSCSENTEVGLYKSETRMMSLWRRAIESNKAMLPE 349
A P S P +IA +D C +N++ + S +MM LW+ A+ESNKA+L +
Sbjct: 353 EARPSISFPAELDIASGSDDSGKSDDDC-DNSDAKILSSSPKMMLLWKHALESNKAILLD 411
Query: 348 DIGLAPDDLLKVVEEFEAVSLVTEHSYHAVIVSNEE--------------TRXXXXXXXX 211
+I L PD LL VEEFE +S TEHSY A+++S+E+ +
Sbjct: 412 EIDLGPDALLTKVEEFEGISQATEHSYPALVMSSEDGSSNSISTFEDDSHSENFSEDDMY 471
Query: 210 XXXXXXXXXYGELSEKSSPPGSLPVDFLAEQL 115
E E S+PPGSL +D +AE+L
Sbjct: 472 SDDEYYDSESFEELETSAPPGSLSIDLIAEKL 503
Score = 40.0 bits (92), Expect(2) = 2e-74
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = -3
Query: 998 GVGFVSKEMIQEHLPFPAFDIKEKTGGTIILPTGGVLYLFRGRHYD 861
GV V + + HL +EKTGG II GGV+YLFRGR+Y+
Sbjct: 192 GVPTVDMDNVCRHL-------EEKTGGKIIHRVGGVVYLFRGRNYN 230
>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 262 bits (670), Expect(2) = 1e-73
Identities = 147/269 (54%), Positives = 179/269 (66%), Gaps = 19/269 (7%)
Frame = -2
Query: 861 SRLQYHVMLWKPATPVYPKFIQEALEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVK 682
+R QY VMLWKPA PVYPK IQEA EGLTKEEA+ELRMKGKNL PICKLAKNGVYI+LV
Sbjct: 333 TRPQYPVMLWKPAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVD 392
Query: 681 DVRQAIEESSLVKIDCRGMHASDFKKLGAKLKELVPCVLLSFDDEQILIWRGRGWKSMY- 505
DVR A E S LVKIDC GMH SD+KKLGAKLKELVPCVLLSFD+EQIL+WRG+ WKS+
Sbjct: 393 DVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVIS 452
Query: 504 --HGAPI-SSTPTFDNIANDPSCSENTEV-----GLYKSETRMMSLWRRAIESNKAMLPE 349
AP+ S + D++ + EN+++ K+ +M LW RAI+SNKA++ +
Sbjct: 453 DDRSAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLD 512
Query: 348 DIGLAPDDLLKVVEEFEAVSLVTEHSYHAVIVSNEETRXXXXXXXXXXXXXXXXXYGELS 169
+IGLAPD+LL+ VEEFE +S TEHSY A I S+EE +
Sbjct: 513 EIGLAPDELLERVEEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNSDDDV 572
Query: 168 EKSS----------PPGSLPVDFLAEQLS 112
+ P GSLPVD +A++LS
Sbjct: 573 GREEDLFDNVDPLVPLGSLPVDIIAKKLS 601
Score = 41.6 bits (96), Expect(2) = 1e-73
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -3
Query: 938 IKEKTGGTIILPTGGVLYLFRGRHYD 861
I+EKTGG II GGVLYLFRGR+Y+
Sbjct: 305 IEEKTGGKIIHRVGGVLYLFRGRNYN 330
>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
gi|223535358|gb|EEF37033.1| conserved hypothetical
protein [Ricinus communis]
Length = 561
Score = 265 bits (677), Expect(2) = 3e-73
Identities = 138/217 (63%), Positives = 161/217 (74%), Gaps = 10/217 (4%)
Frame = -2
Query: 861 SRLQYHVMLWKPATPVYPKFIQEALEGLTKEEADELRMKGKNLPPICKLAKNGVYITLVK 682
SR++Y VMLWKPA PVYPK IQ+A EGLTK EADE R KGKNL PICKLAKNGVYITLV+
Sbjct: 283 SRVRYPVMLWKPAAPVYPKLIQDAPEGLTKAEADEFREKGKNLLPICKLAKNGVYITLVR 342
Query: 681 DVRQAIEESSLVKIDCRGMHASDFKKLGAKLKELVPCVLLSFDDEQILIWRGRGWKSMYH 502
DVR A E S LVKIDC+GM+ SD+KKLGAKLKELVPCVLLSFDDE IL+WRG+ WK MY
Sbjct: 343 DVRNAFEGSPLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDDEHILMWRGQNWKPMYP 402
Query: 501 GAPISSTPTFDNIA----------NDPSCSENTEVGLYKSETRMMSLWRRAIESNKAMLP 352
P STP + +DPS N + + +S +MMSLW AIES+KA+L
Sbjct: 403 EVPSVSTPDAADFTSGSDDSGKFEDDPS---NRDANVVRSSPKMMSLWECAIESSKAILL 459
Query: 351 EDIGLAPDDLLKVVEEFEAVSLVTEHSYHAVIVSNEE 241
+ I L PDDLL+ VEEFE +S TEHSY AVI+S+E+
Sbjct: 460 DQIDLGPDDLLRKVEEFECISQATEHSYPAVILSSED 496
Score = 37.7 bits (86), Expect(2) = 3e-73
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 938 IKEKTGGTIILPTGGVLYLFRGRHYD 861
++E+TGG II GGV+YLF GR+YD
Sbjct: 255 LEERTGGKIIYRIGGVVYLFCGRNYD 280