BLASTX nr result

ID: Atractylodes21_contig00001156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001156
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314076.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1...    97   2e-18
gb|AFX66986.1| photosystem II 5 kDa protein [Solanum tuberosum]        92   4e-17
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc...    91   8e-17
gb|AFK48333.1| unknown [Medicago truncatula]                           89   5e-16

>ref|XP_002314076.1| predicted protein [Populus trichocarpa] gi|222850484|gb|EEE88031.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 58/110 (52%), Positives = 71/110 (64%)
 Frame = -1

Query: 517 MASTTMAASFLGGSAAMAVTKQPSTSGRRGLVVMVKASKVAGVEKIVVDEKKEGDSSNGR 338
           MAS TM ASFL GSA   + KQPST+ RRGL+V  KAS+    E + V+ K   +SS GR
Sbjct: 1   MASITMTASFLTGSA---MAKQPSTTPRRGLIV-AKASRAT--EGVNVEMKNREESSGGR 54

Query: 337 REMMFGVXXXXXXXXXXXXXADDEPKRGSEAAKKKYYPICVTMPTARVCR 188
           R++MF               AD+EP+RG+  AKKKY PICVTMPTAR+CR
Sbjct: 55  RDLMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARICR 104


>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
           unknown [Populus trichocarpa]
           gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222845656|gb|EEE83203.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/110 (50%), Positives = 71/110 (64%)
 Frame = -1

Query: 517 MASTTMAASFLGGSAAMAVTKQPSTSGRRGLVVMVKASKVAGVEKIVVDEKKEGDSSNGR 338
           MAS TM ASFL GS    + KQP T+ RRGL+V  KAS+    E + V+ K + +SS+GR
Sbjct: 1   MASMTMTASFLAGST---MAKQPLTTPRRGLIV-AKASRTT--EGVNVEMKNKEESSSGR 54

Query: 337 REMMFGVXXXXXXXXXXXXXADDEPKRGSEAAKKKYYPICVTMPTARVCR 188
           R++MF               AD+EP+RG+  AKKKY PICVTMPTAR+CR
Sbjct: 55  RDLMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARICR 104


>gb|AFX66986.1| photosystem II 5 kDa protein [Solanum tuberosum]
          Length = 112

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
 Frame = -1

Query: 517 MASTTMAASFLGGSAAMAVTKQP-STSGRRGLVVMVKASK-VAGVEKIVVDEKKEGDSSN 344
           MAS TM  S  GGS A A+TK P +T G R  VVMVKAS  V+  E +V+  KKE +++ 
Sbjct: 1   MASMTMTTSLAGGSVA-ALTKAPVATRGAR--VVMVKASSNVSEGENVVMSNKKEINNNG 57

Query: 343 GRREMMFGVXXXXXXXXXXXXXADDEPKRGSEAAKKKYYPICVTMPTARVCR 188
           GRRE+ F +             ADDEPKRGS  AKKKY+ +CV+ PTAR+CR
Sbjct: 58  GRRELFFAMAAAAACSVAGVAMADDEPKRGSPEAKKKYFQVCVSNPTARICR 109


>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
           gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
           [Medicago truncatula]
          Length = 106

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 54/110 (49%), Positives = 65/110 (59%)
 Frame = -1

Query: 517 MASTTMAASFLGGSAAMAVTKQPSTSGRRGLVVMVKASKVAGVEKIVVDEKKEGDSSNGR 338
           MAS TM +S LG  A   VT Q S + +R LVV+     V G + I  D  KEG  SNGR
Sbjct: 1   MASITMTSSILGFPA---VTNQSSVASQRRLVVVNAVRAVEGEKMIRYDNSKEG--SNGR 55

Query: 337 REMMFGVXXXXXXXXXXXXXADDEPKRGSEAAKKKYYPICVTMPTARVCR 188
           R++MF               AD+EPKRG+  AKKKY P+CVTMPTAR+CR
Sbjct: 56  RDLMFAAAAAAVSTFAGVAMADEEPKRGTPEAKKKYAPVCVTMPTARICR 105


>gb|AFK48333.1| unknown [Medicago truncatula]
          Length = 108

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/111 (45%), Positives = 66/111 (59%)
 Frame = -1

Query: 517 MASTTMAASFLGGSAAMAVTKQPSTSGRRGLVVMVKASKVAGVEKIVVDEKKEGDSSNGR 338
           MAS TM A+F GGS+A+A  + P  + R+  +V+  A+K     K+ V+   E + +NGR
Sbjct: 1   MASITMTAAFFGGSSAIA-NRSPVATQRK--LVVANAAKAVEGGKMKVNYDNEKEETNGR 57

Query: 337 REMMFGVXXXXXXXXXXXXXADDEPKRGSEAAKKKYYPICVTMPTARVCRY 185
           R +MF               A DEPKRGS  AKK Y P+CVTMPTAR+CRY
Sbjct: 58  RNIMFAAAAAAVCSVAGMALAADEPKRGSPEAKKAYAPVCVTMPTARICRY 108


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