BLASTX nr result

ID: Atractylodes21_contig00001121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001121
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ...    94   2e-17
gb|ABK93470.1| unknown [Populus trichocarpa]                           94   3e-17
ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|1...    94   3e-17
ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|1...    91   2e-16
emb|CBI17057.3| unnamed protein product [Vitis vinifera]               91   2e-16

>ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|297740089|emb|CBI30271.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 58/114 (50%), Positives = 63/114 (55%)
 Frame = -3

Query: 603 MKVVXXXXXXXLGGNTSPSADDLKNILGSVGADCDEDRIELLLSEVKDKDITELIASGRE 424
           MKV+       LGGNT PSA+DLK+ILGSVGA+ D+DRIELLLSEVK KDITELIASGRE
Sbjct: 1   MKVIAAYLLAVLGGNTCPSANDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGRE 60

Query: 423 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 262
           KL                                         SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVAATAVGGASGGGAPAAPEPKKEEKVEEKEESDDDMGFSLFD 114


>gb|ABK93470.1| unknown [Populus trichocarpa]
          Length = 114

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 58/114 (50%), Positives = 62/114 (54%)
 Frame = -3

Query: 603 MKVVXXXXXXXLGGNTSPSADDLKNILGSVGADCDEDRIELLLSEVKDKDITELIASGRE 424
           MKVV       LGGNT P+A+DLK+ILGSVGAD D+DRIELLLS VK KDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 423 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 262
           KL                                         SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVASGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


>ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|118481307|gb|ABK92597.1|
           unknown [Populus trichocarpa]
           gi|118485702|gb|ABK94701.1| unknown [Populus
           trichocarpa] gi|222837577|gb|EEE75942.1| predicted
           protein [Populus trichocarpa]
          Length = 114

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 58/114 (50%), Positives = 62/114 (54%)
 Frame = -3

Query: 603 MKVVXXXXXXXLGGNTSPSADDLKNILGSVGADCDEDRIELLLSEVKDKDITELIASGRE 424
           MKVV       LGGNT P+A+DLK+ILGSVGAD D+DRIELLLS VK KDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 423 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 262
           KL                                         SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVAAGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


>ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|118484510|gb|ABK94130.1|
           unknown [Populus trichocarpa]
           gi|118485202|gb|ABK94462.1| unknown [Populus
           trichocarpa] gi|118487376|gb|ABK95516.1| unknown
           [Populus trichocarpa] gi|118488119|gb|ABK95879.1|
           unknown [Populus trichocarpa]
           gi|222850071|gb|EEE87618.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 59/114 (51%), Positives = 62/114 (54%)
 Frame = -3

Query: 603 MKVVXXXXXXXLGGNTSPSADDLKNILGSVGADCDEDRIELLLSEVKDKDITELIASGRE 424
           MKVV       LGGNT P+A+DLKNILGSVGAD D+DRIELLLS VK KDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKNILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 423 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 262
           KL                                         SDDDMGFSLFD
Sbjct: 61  KL-ASVPSGGGVAVSAGAAPAAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 113


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 58/121 (47%), Positives = 67/121 (55%)
 Frame = -3

Query: 624 GCNTNCRMKVVXXXXXXXLGGNTSPSADDLKNILGSVGADCDEDRIELLLSEVKDKDITE 445
           G  ++ +MKV+       LGGNT PSA+DLK+ILGSVGA+ D+DRIELLL+EVK KDITE
Sbjct: 26  GRRSHHKMKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITE 85

Query: 444 LIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLF 265
           LIASGREKL                                         SDDDMGFSLF
Sbjct: 86  LIASGREKL-ASVPSGGGAAVAVAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLF 144

Query: 264 D 262
           D
Sbjct: 145 D 145


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