BLASTX nr result

ID: Atractylodes21_contig00001115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001115
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329229.1| predicted protein [Populus trichocarpa] gi|2...   283   4e-74
ref|XP_002527924.1| multidrug resistance pump, putative [Ricinus...   281   2e-73
ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|2...   278   1e-72
ref|NP_172755.1| root hair specific 2 [Arabidopsis thaliana] gi|...   278   2e-72
emb|CBI23362.3| unnamed protein product [Vitis vinifera]              277   3e-72

>ref|XP_002329229.1| predicted protein [Populus trichocarpa] gi|222871010|gb|EEF08141.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  283 bits (724), Expect = 4e-74
 Identities = 142/236 (60%), Positives = 163/236 (69%)
 Frame = +3

Query: 3   SWAAFSNLWGFVKLSLASAVMLCLETWYFMALILFAGYLKNAEVAVDALSVCTNIVGWAV 182
           SW AF NLW FV+LSLASAVMLCLE WYFMALILFAGYLKNAEVAVDALS+C NI+GW V
Sbjct: 233 SWKAFQNLWSFVRLSLASAVMLCLEVWYFMALILFAGYLKNAEVAVDALSICMNILGWTV 292

Query: 183 MIALGFNAAISVRVSNELGAAHPRTAKXXXXXXXXXXXXXXXXXXXXXXXFRHQYPAVFA 362
           M+ALG NAAISVRVSNELGAAHPRTAK                       FR  YP++F+
Sbjct: 293 MVALGMNAAISVRVSNELGAAHPRTAKFALVVAVVSSFIIGLILAAILLIFRKSYPSLFS 352

Query: 363 DSLEVQQAVYALTPLLAACLIINNIQPALSGVAIGAGWQXXXXXXXXXXXXXFGIPXXXX 542
             L+VQ+ V  LTPLLA C++I+N+QP LSGVAIGAGWQ             FGIP    
Sbjct: 353 SDLDVQELVQDLTPLLALCIVIDNVQPVLSGVAIGAGWQAVVAYVNIACYYIFGIPLGLI 412

Query: 543 XXFAADWGVKGIWIGMLTGTVVQTLILIWICCTTKWDKEASMAEKRIRQWSGQKEV 710
             F    GVKGIW GML+GTV+QT+IL  I   T W+KEAS+AE RIR+W G  ++
Sbjct: 413 LGFKVKLGVKGIWYGMLSGTVLQTIILFLIIYKTNWNKEASIAEDRIRKWGGDTDI 468


>ref|XP_002527924.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223532699|gb|EEF34481.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 531

 Score =  281 bits (719), Expect = 2e-73
 Identities = 138/235 (58%), Positives = 162/235 (68%)
 Frame = +3

Query: 3   SWAAFSNLWGFVKLSLASAVMLCLETWYFMALILFAGYLKNAEVAVDALSVCTNIVGWAV 182
           SW AF NLW FV+LSLASAVMLCLE WYFMALILFAGYLKNAEV+VDALS+C NI+GW V
Sbjct: 285 SWKAFQNLWSFVRLSLASAVMLCLEVWYFMALILFAGYLKNAEVSVDALSICMNILGWTV 344

Query: 183 MIALGFNAAISVRVSNELGAAHPRTAKXXXXXXXXXXXXXXXXXXXXXXXFRHQYPAVFA 362
           MIA+G NAAISVRVSNELGA HPRTAK                        R+ YP++F+
Sbjct: 345 MIAIGMNAAISVRVSNELGAGHPRTAKFSLVVAVISSFLIGVVLSLILFLSRNSYPSLFS 404

Query: 363 DSLEVQQAVYALTPLLAACLIINNIQPALSGVAIGAGWQXXXXXXXXXXXXXFGIPXXXX 542
           +  EV++ V  LTP+LAAC+IINN+QP LSGVAIGAGWQ             FGIP    
Sbjct: 405 NDSEVKELVNELTPVLAACIIINNVQPVLSGVAIGAGWQAIVAYVNIACYYVFGIPMGLI 464

Query: 543 XXFAADWGVKGIWIGMLTGTVVQTLILIWICCTTKWDKEASMAEKRIRQWSGQKE 707
             +   WGV+GIW GM++GTVVQT  L W+   T W+KEAS+AE RIR+W G  +
Sbjct: 465 LGYKVGWGVRGIWYGMMSGTVVQTCALFWMIYKTNWNKEASIAEDRIRKWGGHTD 519


>ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|222837995|gb|EEE76360.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  278 bits (712), Expect = 1e-72
 Identities = 145/243 (59%), Positives = 164/243 (67%), Gaps = 3/243 (1%)
 Frame = +3

Query: 3   SWAAFSNLWGFVKLSLASAVMLCLETWYFMALILFAGYLKNAEVAVDALSVCTNIVGWAV 182
           SW AF NLWGFV+LSLASAVMLCLE WYFMALILFAGYLKNAE+AVDALS+ TNIVGWAV
Sbjct: 270 SWKAFQNLWGFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELAVDALSISTNIVGWAV 329

Query: 183 MIALGFNAAISVRVSNELGAAHPRTAKXXXXXXXXXXXXXXXXXXXXXXXFRHQYPAVFA 362
           MIA+G NAAISVRVSNELGAAHPRTAK                        R+ YP +F 
Sbjct: 330 MIAIGINAAISVRVSNELGAAHPRTAKFSLVVATLASLMIGLVIALILVLARNLYPDLFT 389

Query: 363 DSLEVQQAVYALTPLLAACLIINNIQPALSGVAIGAGWQXXXXXXXXXXXXXFGIPXXXX 542
           +   V++ V  LTPLLA C+IINN+QP LSGVAIGAGWQ             FGIP    
Sbjct: 390 NDAGVKELVKELTPLLAVCIIINNVQPVLSGVAIGAGWQAAVAYVNIGCYYIFGIPLGLI 449

Query: 543 XXFAADWGVKGIWIGMLTGTVVQTLILIWICCTTKWDKEASMAEKRIRQWSGQ---KEVV 713
             +    GV+GIWIGMLTGT VQT +L W+   T W+ EAS AE+RIR+W G+   K   
Sbjct: 450 LGYWLQMGVQGIWIGMLTGTAVQTAVLFWMIGKTNWNTEASAAEERIRKWGGEDDSKNKK 509

Query: 714 GEQ 722
           GEQ
Sbjct: 510 GEQ 512


>ref|NP_172755.1| root hair specific 2 [Arabidopsis thaliana]
           gi|8698742|gb|AAF78500.1|AC012187_20 Strong similarity
           to an unknown protein orf4 gi|1402878 from Arabidopsis
           thaliana 81kb genomic sequence gb|X98130 and is a member
           of an uncharacterized membrane protein PF|01554 family.
           EST gb|AI998833 comes from this gene [Arabidopsis
           thaliana] gi|66792652|gb|AAY56428.1| At1g12950
           [Arabidopsis thaliana] gi|332190832|gb|AEE28953.1| root
           hair specific 2 [Arabidopsis thaliana]
          Length = 522

 Score =  278 bits (710), Expect = 2e-72
 Identities = 131/232 (56%), Positives = 161/232 (69%)
 Frame = +3

Query: 3   SWAAFSNLWGFVKLSLASAVMLCLETWYFMALILFAGYLKNAEVAVDALSVCTNIVGWAV 182
           +W AF NLWGFVKLSLASA MLCLE WYFMAL+LFAGYLKNAEV+V ALS+C NI+GWA 
Sbjct: 281 TWEAFHNLWGFVKLSLASAAMLCLEIWYFMALVLFAGYLKNAEVSVAALSICMNILGWAA 340

Query: 183 MIALGFNAAISVRVSNELGAAHPRTAKXXXXXXXXXXXXXXXXXXXXXXXFRHQYPAVFA 362
           M+A G NAA+SVRVSNELGA+HPRTAK                       FR++YP +F 
Sbjct: 341 MVAFGTNAAVSVRVSNELGASHPRTAKFSLVVAVILSTAIGMFIAAGLLFFRNEYPVLFV 400

Query: 363 DSLEVQQAVYALTPLLAACLIINNIQPALSGVAIGAGWQXXXXXXXXXXXXXFGIPXXXX 542
           +  EV+  V  LTP+LA C++INN+QP LSGVA+GAGWQ             FG+P    
Sbjct: 401 EDEEVRNVVRELTPMLAFCIVINNVQPVLSGVAVGAGWQAVVAYVNIACYYLFGVPFGLL 460

Query: 543 XXFAADWGVKGIWIGMLTGTVVQTLILIWICCTTKWDKEASMAEKRIRQWSG 698
             F  ++GV GIW GM+TGT VQ+++L W+ C T W+KEASMAE+RI++W G
Sbjct: 461 LGFKLEYGVMGIWWGMVTGTFVQSIVLTWMICKTNWEKEASMAEERIKEWGG 512


>emb|CBI23362.3| unnamed protein product [Vitis vinifera]
          Length = 1152

 Score =  277 bits (708), Expect = 3e-72
 Identities = 138/234 (58%), Positives = 162/234 (69%)
 Frame = +3

Query: 3    SWAAFSNLWGFVKLSLASAVMLCLETWYFMALILFAGYLKNAEVAVDALSVCTNIVGWAV 182
            SW AF +LWGFV+LSLASAVMLCLE WYFMALILFAGYLKNAE++VDALS+C NI+GW V
Sbjct: 910  SWKAFQSLWGFVRLSLASAVMLCLEVWYFMALILFAGYLKNAEISVDALSICMNILGWTV 969

Query: 183  MIALGFNAAISVRVSNELGAAHPRTAKXXXXXXXXXXXXXXXXXXXXXXXFRHQYPAVFA 362
            M+ALG NAAISVRVSNELGA HPRTAK                       FR QYPA+F+
Sbjct: 970  MVALGCNAAISVRVSNELGATHPRTAKFAVVVVVITSFLIGLVLSAILIIFRKQYPALFS 1029

Query: 363  DSLEVQQAVYALTPLLAACLIINNIQPALSGVAIGAGWQXXXXXXXXXXXXXFGIPXXXX 542
            DS EV++ V  LTPLLA C++INN+QP LSGVAIGAGWQ             FG+P    
Sbjct: 1030 DSEEVEELVDELTPLLAFCIVINNVQPVLSGVAIGAGWQAFVAWVNIACYYLFGVPLGLV 1089

Query: 543  XXFAADWGVKGIWIGMLTGTVVQTLILIWICCTTKWDKEASMAEKRIRQWSGQK 704
              +    GVKGIW GML+GTVVQT +L  +   T W+KEAS+A  RI++W G +
Sbjct: 1090 LGYKVGLGVKGIWCGMLSGTVVQTCVLFGMVYRTNWNKEASIAGDRIKKWGGNE 1143



 Score =  272 bits (696), Expect = 7e-71
 Identities = 134/229 (58%), Positives = 159/229 (69%)
 Frame = +3

Query: 12  AFSNLWGFVKLSLASAVMLCLETWYFMALILFAGYLKNAEVAVDALSVCTNIVGWAVMIA 191
           AF NLW FVKLSLASAVMLCLE WYFM LILFAGYLKNAEV+VDALS+C  I+GWAVM++
Sbjct: 302 AFQNLWAFVKLSLASAVMLCLEVWYFMVLILFAGYLKNAEVSVDALSICMTILGWAVMLS 361

Query: 192 LGFNAAISVRVSNELGAAHPRTAKXXXXXXXXXXXXXXXXXXXXXXXFRHQYPAVFADSL 371
           +GFNAA+SVRVSNELGA+HPRTAK                        R QYP +F+ + 
Sbjct: 362 IGFNAAVSVRVSNELGASHPRTAKFSVAVAAITSFLISVVLSLILIAARRQYPDLFSSNA 421

Query: 372 EVQQAVYALTPLLAACLIINNIQPALSGVAIGAGWQXXXXXXXXXXXXXFGIPXXXXXXF 551
           E+++ VY+LTPLLA C++INNIQP LSGVA+GAGWQ              G+P      F
Sbjct: 422 EIKKLVYSLTPLLAVCIVINNIQPVLSGVAVGAGWQAFIAYVNIGCYYVIGVPMGLLLGF 481

Query: 552 AADWGVKGIWIGMLTGTVVQTLILIWICCTTKWDKEASMAEKRIRQWSG 698
             D GVKGIW GML+GTV+QT IL  +   T W+ EASMAE+RIR+W G
Sbjct: 482 KLDLGVKGIWCGMLSGTVIQTCILFGMIYRTNWNTEASMAEERIRKWGG 530


Top