BLASTX nr result

ID: Atractylodes21_contig00001101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001101
         (1396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   458   e-126
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C...   454   e-125
dbj|BAI52949.1| light-harvesting complex II protein [Citrullus l...   449   e-123
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   447   e-123
ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein ...   446   e-123

>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  458 bits (1179), Expect = e-126
 Identities = 218/258 (84%), Positives = 235/258 (91%), Gaps = 1/258 (0%)
 Frame = -3

Query: 1313 MAAASSAAVLNGLGSPFLSGGKRSQTLLSAPIGGAT-VEAAPRRLVITAAVAPKKSWIPA 1137
            MAAA+S AVLNGLGS FLSGG RSQTLL+  IGG   V  +PRRL++ AA APKKSWIP 
Sbjct: 1    MAAATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPG 60

Query: 1136 VKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ 957
            V+GGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQ
Sbjct: 61   VRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ 120

Query: 956  AWSGVPWFEAGADPGAIAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATPWSK 777
            AWSGVPWFEAGADP AIAPFSF         LMGWVESKRWVDFFNP+SQSVEWATPWSK
Sbjct: 121  AWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSK 180

Query: 776  TAENFANATGEQGYPGGKFFDPLGFAGTIQNGVYIPDTEKLERLKVAEIKHARLAMVAML 597
            TAENFANATGEQGYPGGKFFDPLGFAGT+++GVYIPDTEKLERLK+AEIKHAR+AM+AML
Sbjct: 181  TAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAML 240

Query: 596  VFYFEAGQGKTPLGALGL 543
            +FYFEAGQGKTPLGALGL
Sbjct: 241  IFYFEAGQGKTPLGALGL 258


>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Glycine max]
          Length = 261

 Score =  454 bits (1167), Expect = e-125
 Identities = 216/261 (82%), Positives = 234/261 (89%), Gaps = 4/261 (1%)
 Frame = -3

Query: 1313 MAAASSAAVLNGLGSPFLSGGKRSQTLLSAPIGG----ATVEAAPRRLVITAAVAPKKSW 1146
            MAAA+S AVLNGLGS FLSGG RSQTLL+  IGG    A V  +PRRL++ AA APKKSW
Sbjct: 1    MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSW 60

Query: 1145 IPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF 966
            +P V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF
Sbjct: 61   LPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIF 120

Query: 965  VGQAWSGVPWFEAGADPGAIAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATP 786
            VGQAWSGVPWFEAGADP AIAPFSF         LMGWVESKRWVDFFNP+SQSVEWATP
Sbjct: 121  VGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATP 180

Query: 785  WSKTAENFANATGEQGYPGGKFFDPLGFAGTIQNGVYIPDTEKLERLKVAEIKHARLAMV 606
            WS+T+ENFANATGEQGYPGGKFFDPL  AGTI++GVYIPDTEKLERLK+AEIKHAR+AM+
Sbjct: 181  WSRTSENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDTEKLERLKLAEIKHARIAML 240

Query: 605  AMLVFYFEAGQGKTPLGALGL 543
            AML+FYFEAGQGKTPLGALGL
Sbjct: 241  AMLIFYFEAGQGKTPLGALGL 261


>dbj|BAI52949.1| light-harvesting complex II protein [Citrullus lanatus subsp.
            vulgaris]
          Length = 255

 Score =  449 bits (1154), Expect = e-123
 Identities = 214/255 (83%), Positives = 229/255 (89%)
 Frame = -3

Query: 1307 AASSAAVLNGLGSPFLSGGKRSQTLLSAPIGGATVEAAPRRLVITAAVAPKKSWIPAVKG 1128
            AA+S  VLNGLGSPFL GG R+QTLL+   GG  V  + R+LV+ AA  PKKSWIPAVKG
Sbjct: 2    AATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGS-RKLVVVAAAQPKKSWIPAVKG 60

Query: 1127 GGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 948
            GGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61   GGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 947  GVPWFEAGADPGAIAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATPWSKTAE 768
            G+PWFEAGADPGAIAPFSF         LMGWVESKRWVDFFNPESQ+VEWATPW +TAE
Sbjct: 121  GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWLRTAE 180

Query: 767  NFANATGEQGYPGGKFFDPLGFAGTIQNGVYIPDTEKLERLKVAEIKHARLAMVAMLVFY 588
            NFAN TGEQGYPGGKFFDPLGFAGTI++GVYIPDTEKLERLK+AEIKHAR+AM+AML+FY
Sbjct: 181  NFANTTGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 587  FEAGQGKTPLGALGL 543
            FEAGQGKTPLGALGL
Sbjct: 241  FEAGQGKTPLGALGL 255


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  447 bits (1151), Expect = e-123
 Identities = 217/259 (83%), Positives = 229/259 (88%), Gaps = 4/259 (1%)
 Frame = -3

Query: 1307 AASSAAVLNGLGSPFLSGGKRSQTLLSAP----IGGATVEAAPRRLVITAAVAPKKSWIP 1140
            A +SAAVLNGL S FL+GGK SQ LL AP    IGG    A P+R ++ AA APKKSWIP
Sbjct: 2    ATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGL---ATPKRCIVAAAAAPKKSWIP 58

Query: 1139 AVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 960
            AVKGGGNL+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVG
Sbjct: 59   AVKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVG 118

Query: 959  QAWSGVPWFEAGADPGAIAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATPWS 780
            QAWSG+PWFEAGADPGAIAPFSF         LMGWVESKRWVDFFNPESQSVEWATPWS
Sbjct: 119  QAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 178

Query: 779  KTAENFANATGEQGYPGGKFFDPLGFAGTIQNGVYIPDTEKLERLKVAEIKHARLAMVAM 600
            KTAENFAN TGEQGYPGGKFFDPL  AGT+Q+GVYIPDTEKLERLKVAEIKHARLAM+AM
Sbjct: 179  KTAENFANFTGEQGYPGGKFFDPLSLAGTLQDGVYIPDTEKLERLKVAEIKHARLAMLAM 238

Query: 599  LVFYFEAGQGKTPLGALGL 543
            L+FYFEAGQGKTPLGALGL
Sbjct: 239  LIFYFEAGQGKTPLGALGL 257


>ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein CP24 [Medicago
            truncatula] gi|355482225|gb|AES63428.1| Chloroplast
            chlorophyll a/b-binding protein CP24 [Medicago
            truncatula]
          Length = 261

 Score =  446 bits (1146), Expect = e-123
 Identities = 217/261 (83%), Positives = 232/261 (88%), Gaps = 4/261 (1%)
 Frame = -3

Query: 1313 MAAASSAAVLNGLGSPFLSGGKRSQTLLSAPIGGATVEAA---PRRLVITAAV-APKKSW 1146
            MAAA+S AVLNGLGS FLSGGKRSQTLL+    GA V  A   P+RL++ AA  APKKSW
Sbjct: 1    MAAATSGAVLNGLGSSFLSGGKRSQTLLATTAIGAKVGVAAGSPKRLIVAAAASAPKKSW 60

Query: 1145 IPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF 966
            IP V+ GGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF
Sbjct: 61   IPGVRFGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIF 120

Query: 965  VGQAWSGVPWFEAGADPGAIAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATP 786
            VGQAWSGVPWFEAGADP AIAPFSF         LMGWVESKRWVDFFNP+SQS+EWATP
Sbjct: 121  VGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSIEWATP 180

Query: 785  WSKTAENFANATGEQGYPGGKFFDPLGFAGTIQNGVYIPDTEKLERLKVAEIKHARLAMV 606
            WSKTAENFANATGEQGYPGGKFFDPL  AGTI+NGVYIPDTEKLERLK+AEIKHARLAM+
Sbjct: 181  WSKTAENFANATGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLERLKLAEIKHARLAML 240

Query: 605  AMLVFYFEAGQGKTPLGALGL 543
            AML+FYFEAGQGKTPLGALGL
Sbjct: 241  AMLIFYFEAGQGKTPLGALGL 261


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