BLASTX nr result

ID: Atractylodes21_contig00001067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001067
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   208   3e-51
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   183   9e-44
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   179   2e-42
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...   157   5e-36
ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213...   157   7e-36

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
            vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
            product [Vitis vinifera]
          Length = 333

 Score =  208 bits (530), Expect = 3e-51
 Identities = 117/243 (48%), Positives = 155/243 (63%), Gaps = 1/243 (0%)
 Frame = -1

Query: 1394 KVDACSHPLAAGAKPHLFYKCLLNQHAQKLRKESPIYRTYNEGVDHLPKFRSTVWIDGVS 1215
            KVD C  P +     HL +K  L ++ Q+     PIY+T NEG  H PKFRSTV +DG +
Sbjct: 6    KVD-CPAPSSTRLPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGAT 64

Query: 1214 YTSSNTYQQRKMAEMDVSKMAYSAIMQKSKNEALHLIRQDKIFCKSILVEYAAKMTIEKP 1035
            YTS NT+  RK AE DV+++A   I +K K+E   LIR+D +FCKSIL E+A KM +EKP
Sbjct: 65   YTSPNTFSHRKAAEQDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKP 124

Query: 1034 TYDTIQLGGTLMPTFRSSLVFNGVTYSGDSGKSKKEAEQLAARAVILKYL-ESESGNDMS 858
            TY T+Q  G L+P F SSLVFNGVTY+GD+G++KKEAEQLAAR VIL  L  S SG  +S
Sbjct: 125  TYTTVQPEG-LLPVFVSSLVFNGVTYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLS 183

Query: 857  EIINCKFRHYAEMHKAQEINNVHTDTSVVGAQTGVNDAIDLNKAVAESGTSTMLESCVGP 678
            EII  K + YA +H+ ++ + +HT    +G  +G+         VA  GT  +L + V  
Sbjct: 184  EIIKSKVKLYAALHRVKDPSYIHTGILPIGLTSGIPPCKGKEVEVA-PGTDQLLPTAVSV 242

Query: 677  EVS 669
             +S
Sbjct: 243  PLS 245


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  183 bits (465), Expect = 9e-44
 Identities = 99/248 (39%), Positives = 149/248 (60%), Gaps = 1/248 (0%)
 Frame = -1

Query: 1496 PEPEPALEKVNACSQPLTTEISGTSKSEAEPVPEKVDACSHPLAAGAKPHLFYKCLLNQH 1317
            P P+P      A    L+   + ++ +    V E +      +  G   +L YK  L ++
Sbjct: 88   PVPDPTPNPAPAPDSTLSPSPAASTTTLTSRVSENISFSKKLVKKGLPDNLMYKNRLQEY 147

Query: 1316 AQKLRKESPIYRTYNEGVDHLPKFRSTVWIDGVSYTSSNTYQQRKMAEMDVSKMAYSAIM 1137
             QK   + P+Y+T NEG  H+P+FRSTVW+DG  Y S  T+  RK AE DV+ +A  +I+
Sbjct: 148  TQKSSLQLPVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKAAEQDVANLALESIL 207

Query: 1136 QKSKNEALHLIRQDKIFCKSILVEYAAKMTIEKPTYDTIQLGGTLMPTFRSSLVFNGVTY 957
            ++ K+E   L+  D +FCKSIL E+A K+  EKPTY+T+Q  G L+P F S+LVF+GV+Y
Sbjct: 208  KRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPG-LLPVFISTLVFDGVSY 266

Query: 956  SGDSGKSKKEAEQLAARAVILKYL-ESESGNDMSEIINCKFRHYAEMHKAQEINNVHTDT 780
            +GD+G++KKEAEQLAARAVIL  +  S S   + EII  K + YA + + ++ ++   + 
Sbjct: 267  TGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAALDRVKDPSHSQPNI 326

Query: 779  SVVGAQTG 756
              V  + G
Sbjct: 327  VPVAVKVG 334


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223527827|gb|EEF29925.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 289

 Score =  179 bits (454), Expect = 2e-42
 Identities = 99/204 (48%), Positives = 131/204 (64%), Gaps = 3/204 (1%)
 Frame = -1

Query: 1370 LAAGAKPHLFYKCLLNQHAQKLRKESPIYRTYNEGVDHLPKFRSTVWIDGVSYTSSNTYQ 1191
            L   A  HL YK  L ++ Q+   + PIY+T NEG  H PKFRSTV +DG  YTS NT+ 
Sbjct: 4    LLVAAPEHLMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFS 63

Query: 1190 QRKMAEMDVSKMAYSAIMQKSKNEAL--HLIRQDKIFCKSILVEYAAKMTIEKPTYDTIQ 1017
             RK AE DV+K+A ++I +K K+E        +D + CKSIL EYA KM +E PTY+T++
Sbjct: 64   HRKEAEQDVAKLALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVK 123

Query: 1016 LGGTLMPTFRSSLVFNGVTYSGDSGKSKKEAEQLAARAVILKYLES-ESGNDMSEIINCK 840
             GG L P F SS VFNGVTY+GD G++KKEAEQLAARA +L  L + ESG  +S+    K
Sbjct: 124  QGG-LFPIFVSSSVFNGVTYNGDIGRTKKEAEQLAARAAVLSLLRNVESGEIISKFFKSK 182

Query: 839  FRHYAEMHKAQEINNVHTDTSVVG 768
             + Y   HK+   +  +++  VVG
Sbjct: 183  RKLYVGFHKSDSQDAQNSNMPVVG 206


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  157 bits (398), Expect = 5e-36
 Identities = 106/298 (35%), Positives = 161/298 (54%), Gaps = 24/298 (8%)
 Frame = -1

Query: 1508 GMSKPEPEPALEKVNACSQPLTTEISGTSKSEAEPVPEKV--DACSHPLAAGA---KPHL 1344
            G  +  P P+       + P+  E S T + + +  P  V  D    P AA A    P+L
Sbjct: 10   GAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAAPAPIPSPNL 69

Query: 1343 -------FYKCLLNQHAQKLRKESPIYRTYNEGVDHLPKFRSTVWIDGVSYTSSNTYQQR 1185
                    YK  L+++ QK +   P+Y+T +EG   LPK+RSTV +D V Y S NT++ R
Sbjct: 70   SDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNR 129

Query: 1184 KMAEMDVSKMAYSAIMQKSKNEALHLIRQDKIFCKSILVEYAAKMTIEKPTYDTIQLGGT 1005
            + AE D +++A+  I +K+K++A  L+R+D + CKSIL EY  KM +E+P Y T    G+
Sbjct: 130  RAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGS 189

Query: 1004 LMPTFRSSLVFNGVTYSGDSGKSKKEAEQLAARAVILKYLES----ESGNDMSEIINCKF 837
             +  F+S+LVF+GV Y+ D G++KKEAEQLAARA IL   E     +S   + +II  K 
Sbjct: 190  -VAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKV 248

Query: 836  RHYAEMHKAQEIN------NVHTDTSVVGAQTGVNDAIDLNKAVAESGT--STMLESC 687
            R +A + K ++ N          + +V      VN+  +L  AV + G     + E+C
Sbjct: 249  RFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCGAISEAC 306


>ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  157 bits (397), Expect = 7e-36
 Identities = 104/288 (36%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
 Frame = -1

Query: 1508 GMSKPEPEPALEKVNACSQPLTTEISGTSKSEAEPVPEKV--DACSHPLAAGA---KPHL 1344
            G  +  P P+       + P+  E S T + + +  P  V  D    P AA A    P+L
Sbjct: 10   GAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAAPAPIPSPNL 69

Query: 1343 -------FYKCLLNQHAQKLRKESPIYRTYNEGVDHLPKFRSTVWIDGVSYTSSNTYQQR 1185
                    YK  L+++ QK +   P+Y+T +EG   LPK+RSTV +D V Y S NT++ R
Sbjct: 70   SDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNR 129

Query: 1184 KMAEMDVSKMAYSAIMQKSKNEALHLIRQDKIFCKSILVEYAAKMTIEKPTYDTIQLGGT 1005
            + AE D +++A+  I +K+K++A  L+R+D + CKSIL EY  KM +E+P Y T    G+
Sbjct: 130  RAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGS 189

Query: 1004 LMPTFRSSLVFNGVTYSGDSGKSKKEAEQLAARAVILKYLES----ESGNDMSEIINCKF 837
             +  F+S+LVF+GV Y+ D G++KKEAEQLAARA IL   E     +S   + +II  K 
Sbjct: 190  -VAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKV 248

Query: 836  RHYAEMHKAQEIN------NVHTDTSVVGAQTGVNDAIDLNKAVAESG 711
            R +A + K ++ N          + +V      VN+  +L  AV + G
Sbjct: 249  RFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGG 296


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