BLASTX nr result

ID: Atractylodes21_contig00001061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001061
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Rici...   244   3e-62
ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloro...   236   8e-60
gb|ABA40429.1| unknown [Solanum tuberosum]                            232   1e-58
ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloro...   231   3e-58
ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   229   1e-57

>ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223550509|gb|EEF51996.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 193

 Score =  244 bits (623), Expect = 3e-62
 Identities = 133/193 (68%), Positives = 145/193 (75%)
 Frame = -3

Query: 841 MKAFALLRSIRMRPTHREITGPLQSRCFQPDFVPADPKAKPKRYKLXXXXXXXXXXXXXX 662
           MK   LLRS+  R T REITGPLQ R FQ DFVP DPK  P++YK               
Sbjct: 1   MKFVPLLRSVSTRYTLREITGPLQVRFFQHDFVPRDPKINPRKYKYPAFYDPYGPRPPPS 60

Query: 661 DKIVQLAEKIAALPAEERMQIGPTLRERLRHPKMQSISVEGVDLXXXXXXXXXXAKPEEK 482
           DKIVQLAE+IAALP EER QIGPTL  +L HPK+Q+IS EG+DL          AK EEK
Sbjct: 61  DKIVQLAERIAALPPEERRQIGPTLHYKLNHPKLQTISTEGMDLGAQGSQAAVAAKVEEK 120

Query: 481 VEKTAFDIKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDMVEKVPVVIKQGVTKEEANDII 302
            EKTAFD+KLEKFDAAAKIKVIKEVRAFTNLGLKEAKD+VEK P V+KQGVTKEEANDII
Sbjct: 121 KEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKAPAVLKQGVTKEEANDII 180

Query: 301 EKIKAAGGVAVME 263
           EKIKAAGGVA+ME
Sbjct: 181 EKIKAAGGVAIME 193


>ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 193

 Score =  236 bits (602), Expect = 8e-60
 Identities = 127/193 (65%), Positives = 147/193 (76%)
 Frame = -3

Query: 841 MKAFALLRSIRMRPTHREITGPLQSRCFQPDFVPADPKAKPKRYKLXXXXXXXXXXXXXX 662
           MK  AL++++R+ PT  +I GPLQSR FQ DFVP +P AKPKRYK               
Sbjct: 1   MKFTALVKTVRVHPTLPKIIGPLQSRFFQHDFVPREPNAKPKRYKYPPFYDPYGPKPPPS 60

Query: 661 DKIVQLAEKIAALPAEERMQIGPTLRERLRHPKMQSISVEGVDLXXXXXXXXXXAKPEEK 482
           +K+V LAE+IAAL  EER+QIGP L++RL  PK Q IS EG++L           K EEK
Sbjct: 61  EKVVGLAERIAALAPEERLQIGPMLKDRLSLPKTQVISTEGMELGSQGGAAAGAGKVEEK 120

Query: 481 VEKTAFDIKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDMVEKVPVVIKQGVTKEEANDII 302
           VEKTAFD+KLEKF+AAAKIKVIKEVRAFT+LGLKEAKD+VEKVPVVIKQG+TKEEANDII
Sbjct: 121 VEKTAFDVKLEKFEAAAKIKVIKEVRAFTSLGLKEAKDLVEKVPVVIKQGITKEEANDII 180

Query: 301 EKIKAAGGVAVME 263
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193


>gb|ABA40429.1| unknown [Solanum tuberosum]
          Length = 194

 Score =  232 bits (591), Expect = 1e-58
 Identities = 130/194 (67%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
 Frame = -3

Query: 841 MKAFALLRSIRMRPTHREITGPLQSRCFQPDFVPADPKAKPKRYKLXXXXXXXXXXXXXX 662
           MK  A LR I+     REI GPLQSR FQPDFVP DP AKP RYK               
Sbjct: 1   MKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNAKPIRYKYPAAYDPYGPRPPPS 60

Query: 661 DKIVQLAEKIAALPAEERMQIGPTLRERLRHPKMQSISVEGVDLXXXXXXXXXXAKPEEK 482
           DKIVQLAE+IAAL  EER QIGP LRE LRHP ++ ISVEG+DL          AK EEK
Sbjct: 61  DKIVQLAERIAALAPEERRQIGPLLREILRHPNLKQISVEGMDLGAIGGAGGGPAKAEEK 120

Query: 481 -VEKTAFDIKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDMVEKVPVVIKQGVTKEEANDI 305
            VEKTAFD+KLEKFDAAAKIKVIKEVR+FT+LGLKEAK++VEK P ++KQGVTKEEAN+I
Sbjct: 121 KVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKELVEKAPAILKQGVTKEEANEI 180

Query: 304 IEKIKAAGGVAVME 263
           IEKIKA GGVAVME
Sbjct: 181 IEKIKAVGGVAVME 194


>ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
           sativus]
          Length = 193

 Score =  231 bits (588), Expect = 3e-58
 Identities = 122/193 (63%), Positives = 143/193 (74%)
 Frame = -3

Query: 841 MKAFALLRSIRMRPTHREITGPLQSRCFQPDFVPADPKAKPKRYKLXXXXXXXXXXXXXX 662
           MK   + +S+++R T  +I G  Q R FQPDF P DP AKPK+YK               
Sbjct: 1   MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60

Query: 661 DKIVQLAEKIAALPAEERMQIGPTLRERLRHPKMQSISVEGVDLXXXXXXXXXXAKPEEK 482
           DKI++LAE+I ALPA ER QIGPTL E+LRHPK+Q ISV+G+D+          +  EEK
Sbjct: 61  DKIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120

Query: 481 VEKTAFDIKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDMVEKVPVVIKQGVTKEEANDII 302
            EKTAFD+KLEKFDAA+KIKVIKEVRAFTNLGLKEAKD+VEKVP ++KQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 301 EKIKAAGGVAVME 263
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193


>ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L12,
           chloroplastic-like [Cucumis sativus]
          Length = 193

 Score =  229 bits (584), Expect = 1e-57
 Identities = 121/193 (62%), Positives = 142/193 (73%)
 Frame = -3

Query: 841 MKAFALLRSIRMRPTHREITGPLQSRCFQPDFVPADPKAKPKRYKLXXXXXXXXXXXXXX 662
           MK   + +S+++R T  +I G  Q R FQPDF P DP AKPK+YK               
Sbjct: 1   MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60

Query: 661 DKIVQLAEKIAALPAEERMQIGPTLRERLRHPKMQSISVEGVDLXXXXXXXXXXAKPEEK 482
           DKI++LAE+I ALPA ER QIGPTL  +LRHPK+Q ISV+G+D+          +  EEK
Sbjct: 61  DKIIELAERIVALPAAERCQIGPTLXRKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120

Query: 481 VEKTAFDIKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDMVEKVPVVIKQGVTKEEANDII 302
            EKTAFD+KLEKFDAA+KIKVIKEVRAFTNLGLKEAKD+VEKVP ++KQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 301 EKIKAAGGVAVME 263
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193


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