BLASTX nr result

ID: Atractylodes21_contig00001051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001051
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis]          195   6e-48
gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum t...   186   3e-45
ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersi...   185   6e-45
gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]            183   2e-44
ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrat...   182   4e-44

>gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis]
          Length = 149

 Score =  195 bits (495), Expect = 6e-48
 Identities = 98/110 (89%), Positives = 105/110 (95%)
 Frame = -1

Query: 618 SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 439
           SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR
Sbjct: 22  SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 81

Query: 438 MDFVPDESAIKTDRIEVDKETIDLLASLGMSELPGIVLKEDTPMISTSLP 289
           MDFVPDESAIKTD IEVDKETIDLLASLGMSE+PG+VLKE+  + + ++P
Sbjct: 82  MDFVPDESAIKTDHIEVDKETIDLLASLGMSEMPGVVLKEEIGVFAPAIP 131


>gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum tuberosum]
          Length = 144

 Score =  186 bits (472), Expect = 3e-45
 Identities = 94/110 (85%), Positives = 101/110 (91%)
 Frame = -1

Query: 618 SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 439
           SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR
Sbjct: 22  SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 81

Query: 438 MDFVPDESAIKTDRIEVDKETIDLLASLGMSELPGIVLKEDTPMISTSLP 289
           MDFVPDESAIKTD IEVDKET+D+L+SLGMS+LPG+V +   P    +LP
Sbjct: 82  MDFVPDESAIKTDLIEVDKETLDMLSSLGMSDLPGVVKQAAEPQAVAALP 131


>ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersicum]
           gi|20141760|sp|P49215.3|RS17_SOLLC RecName: Full=40S
           ribosomal protein S17
           gi|5758304|gb|AAD50774.1|AF161704_1 40S ribosomal
           protein S17 [Solanum lycopersicum]
          Length = 144

 Score =  185 bits (469), Expect = 6e-45
 Identities = 93/110 (84%), Positives = 101/110 (91%)
 Frame = -1

Query: 618 SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 439
           SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR
Sbjct: 22  SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 81

Query: 438 MDFVPDESAIKTDRIEVDKETIDLLASLGMSELPGIVLKEDTPMISTSLP 289
           MDFVPDESAIKTD IEVDKET+D+L++LGMS+LPG+V +   P    +LP
Sbjct: 82  MDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQAAEPQAVAALP 131


>gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]
          Length = 145

 Score =  183 bits (464), Expect = 2e-44
 Identities = 93/111 (83%), Positives = 103/111 (92%), Gaps = 1/111 (0%)
 Frame = -1

Query: 618 SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 439
           SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR
Sbjct: 22  SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 81

Query: 438 MDFVPDESAIKTDRIEVDKETIDLLASLGMSELPGIVLKEDTPM-ISTSLP 289
           MDFVPDESAIKTD IEVDKET+D+L++LGM+ELPG+V +   P  ++ +LP
Sbjct: 82  MDFVPDESAIKTDLIEVDKETLDMLSALGMAELPGVVKQAAEPQAVAATLP 132


>ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]
           gi|297317044|gb|EFH47466.1| 40S ribosomal protein S17
           [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score =  182 bits (462), Expect = 4e-44
 Identities = 91/97 (93%), Positives = 96/97 (98%)
 Frame = -1

Query: 618 SKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 439
           S+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR
Sbjct: 22  SRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERR 81

Query: 438 MDFVPDESAIKTDRIEVDKETIDLLASLGMSELPGIV 328
           MDFVPDESAIKTD IEVDKET+++LASLGMSELPG+V
Sbjct: 82  MDFVPDESAIKTDHIEVDKETLEMLASLGMSELPGVV 118


Top