BLASTX nr result

ID: Atractylodes21_contig00001038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001038
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   119   2e-54
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact...   119   2e-54
emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]   119   2e-54
ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicag...   119   3e-54
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ...   119   3e-54

>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  119 bits (298), Expect(2) = 2e-54
 Identities = 58/62 (93%), Positives = 59/62 (95%)
 Frame = -3

Query: 370  KKLTNAQRSRLNQIPNRRFTLWWSPTINRAIINVGFQVQLDLTGIFMHGKIPTLKISLIQ 191
            KKLTNAQRS LNQIPNRRFTLWWSPTINRA + VGFQVQLDLTGIFMHGKIPTLKISLIQ
Sbjct: 1548 KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQ 1607

Query: 190  IF 185
            IF
Sbjct: 1608 IF 1609



 Score =  118 bits (295), Expect(2) = 2e-54
 Identities = 55/58 (94%), Positives = 56/58 (96%)
 Frame = -2

Query: 176  WQKVHESVVMDLCQVLDQELDALEFKTVQMETIHPRKSYKMNSSCADILLFAAHRWPM 3
            WQKVHESVVMDLCQVLDQELDALE +TVQ ETIHPRKSYKMNSSCADILLFAAHRWPM
Sbjct: 1614 WQKVHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPM 1671


>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
            [Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
            protein product [Vitis vinifera]
          Length = 2347

 Score =  119 bits (298), Expect(2) = 2e-54
 Identities = 58/62 (93%), Positives = 59/62 (95%)
 Frame = -3

Query: 370  KKLTNAQRSRLNQIPNRRFTLWWSPTINRAIINVGFQVQLDLTGIFMHGKIPTLKISLIQ 191
            KKLTNAQRS LNQIPNRRFTLWWSPTINRA + VGFQVQLDLTGIFMHGKIPTLKISLIQ
Sbjct: 1528 KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQ 1587

Query: 190  IF 185
            IF
Sbjct: 1588 IF 1589



 Score =  118 bits (295), Expect(2) = 2e-54
 Identities = 55/58 (94%), Positives = 56/58 (96%)
 Frame = -2

Query: 176  WQKVHESVVMDLCQVLDQELDALEFKTVQMETIHPRKSYKMNSSCADILLFAAHRWPM 3
            WQKVHESVVMDLCQVLDQELDALE +TVQ ETIHPRKSYKMNSSCADILLFAAHRWPM
Sbjct: 1594 WQKVHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPM 1651


>emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]
          Length = 2294

 Score =  119 bits (298), Expect(2) = 2e-54
 Identities = 58/62 (93%), Positives = 59/62 (95%)
 Frame = -3

Query: 370  KKLTNAQRSRLNQIPNRRFTLWWSPTINRAIINVGFQVQLDLTGIFMHGKIPTLKISLIQ 191
            KKLTNAQRS LNQIPNRRFTLWWSPTINRA + VGFQVQLDLTGIFMHGKIPTLKISLIQ
Sbjct: 1499 KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQ 1558

Query: 190  IF 185
            IF
Sbjct: 1559 IF 1560



 Score =  118 bits (295), Expect(2) = 2e-54
 Identities = 55/58 (94%), Positives = 56/58 (96%)
 Frame = -2

Query: 176  WQKVHESVVMDLCQVLDQELDALEFKTVQMETIHPRKSYKMNSSCADILLFAAHRWPM 3
            WQKVHESVVMDLCQVLDQELDALE +TVQ ETIHPRKSYKMNSSCADILLFAAHRWPM
Sbjct: 1565 WQKVHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPM 1622


>ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicago truncatula]
            gi|355486962|gb|AES68165.1| Pre-mRNA-processing-splicing
            factor [Medicago truncatula]
          Length = 2398

 Score =  119 bits (298), Expect(2) = 3e-54
 Identities = 58/62 (93%), Positives = 59/62 (95%)
 Frame = -3

Query: 370  KKLTNAQRSRLNQIPNRRFTLWWSPTINRAIINVGFQVQLDLTGIFMHGKIPTLKISLIQ 191
            KKLTNAQRS LNQIPNRRFTLWWSPTINRA + VGFQVQLDLTGIFMHGKIPTLKISLIQ
Sbjct: 1538 KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQ 1597

Query: 190  IF 185
            IF
Sbjct: 1598 IF 1599



 Score =  117 bits (294), Expect(2) = 3e-54
 Identities = 54/58 (93%), Positives = 56/58 (96%)
 Frame = -2

Query: 176  WQKVHESVVMDLCQVLDQELDALEFKTVQMETIHPRKSYKMNSSCADILLFAAHRWPM 3
            WQK+HESVVMDLCQVLDQELDALE +TVQ ETIHPRKSYKMNSSCADILLFAAHRWPM
Sbjct: 1604 WQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPM 1661


>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
            gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
            factor, putative [Ricinus communis]
          Length = 2376

 Score =  119 bits (298), Expect(2) = 3e-54
 Identities = 58/62 (93%), Positives = 59/62 (95%)
 Frame = -3

Query: 370  KKLTNAQRSRLNQIPNRRFTLWWSPTINRAIINVGFQVQLDLTGIFMHGKIPTLKISLIQ 191
            KKLTNAQRS LNQIPNRRFTLWWSPTINRA + VGFQVQLDLTGIFMHGKIPTLKISLIQ
Sbjct: 1557 KKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQ 1616

Query: 190  IF 185
            IF
Sbjct: 1617 IF 1618



 Score =  117 bits (294), Expect(2) = 3e-54
 Identities = 54/58 (93%), Positives = 56/58 (96%)
 Frame = -2

Query: 176  WQKVHESVVMDLCQVLDQELDALEFKTVQMETIHPRKSYKMNSSCADILLFAAHRWPM 3
            WQK+HESVVMDLCQVLDQELDALE +TVQ ETIHPRKSYKMNSSCADILLFAAHRWPM
Sbjct: 1623 WQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPM 1680


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