BLASTX nr result

ID: Atractylodes21_contig00001026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001026
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865669.1| 60S ribosomal protein L13A [Arabidopsis lyra...   374   e-101
ref|NP_199687.1| 60S ribosomal protein L13a-4 [Arabidopsis thali...   374   e-101
ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like...   373   e-101
ref|XP_002882511.1| structural constituent of ribosome [Arabidop...   372   e-101
gb|ADR71263.1| 60S ribosomal protein L13aA [Hevea brasiliensis]       372   e-101

>ref|XP_002865669.1| 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata]
           gi|297311504|gb|EFH41928.1| 60S ribosomal protein L13A
           [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score =  374 bits (961), Expect = e-101
 Identities = 182/206 (88%), Positives = 196/206 (95%)
 Frame = +2

Query: 104 MVSGSGICAREVVVDARHHMLGRLSSILAKELLNGQRVTVVRCEEICLSGGLVRQKMKYL 283
           MVSGSGIC++ VVVDARHHMLGRL+SI AKELLNGQ+V +VRCEEICLSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 284 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPTPYNRK 463
           RFLRKRMNTKPSHGPIHFRAPSKI WRT+RGMIPHKTKRGAAALARLKV+EGVPTPY++ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPTPYDKI 120

Query: 464 KRMVIPDALKVLRLTAGHKYCLLGRLSSEVGWNHYETIKDLEKKRKEKAQVVYERKKQLN 643
           KRMVIPDALKVLRL AGHKYCLLGRLSSEVGWNHY+TIK+LE KRKE+AQVVYERKKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAQVVYERKKQLN 180

Query: 644 KLRAKAEKVAEEKLGAQLEILDPVTY 721
           KLR KAEKVAEEKLGAQL+IL PV Y
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206


>ref|NP_199687.1| 60S ribosomal protein L13a-4 [Arabidopsis thaliana]
           gi|145334783|ref|NP_001078737.1| 60S ribosomal protein
           L13a-4 [Arabidopsis thaliana]
           gi|17865558|sp|Q9FKC0.1|R13A4_ARATH RecName: Full=60S
           ribosomal protein L13a-4 gi|9758875|dbj|BAB09429.1| 60S
           ribosomal protein L13a [Arabidopsis thaliana]
           gi|19699305|gb|AAL91263.1| AT5g48760/K24G6_9
           [Arabidopsis thaliana] gi|21593767|gb|AAM65734.1| 60S
           ribosomal protein L13a [Arabidopsis thaliana]
           gi|21689627|gb|AAM67435.1| At5g48760/K24G6_9
           [Arabidopsis thaliana] gi|332008337|gb|AED95720.1| 60S
           ribosomal protein L13a-4 [Arabidopsis thaliana]
           gi|332008338|gb|AED95721.1| 60S ribosomal protein L13a-4
           [Arabidopsis thaliana]
          Length = 206

 Score =  374 bits (960), Expect = e-101
 Identities = 182/206 (88%), Positives = 195/206 (94%)
 Frame = +2

Query: 104 MVSGSGICAREVVVDARHHMLGRLSSILAKELLNGQRVTVVRCEEICLSGGLVRQKMKYL 283
           MVSGSGIC++ VVVDARHHMLGRL+SI AKELLNGQ+V +VRCEEICLSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 284 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPTPYNRK 463
           RFLRKRMNTKPSHGPIHFRAPSKI WRT+RGMIPHKTKRGAAALARLKVYEGVPTPY++ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 464 KRMVIPDALKVLRLTAGHKYCLLGRLSSEVGWNHYETIKDLEKKRKEKAQVVYERKKQLN 643
           KRMVIPDALKVLRL AGHKYCLLGRLSSEVGWNHY+TIK+LE KRKE+A VVYERKKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 644 KLRAKAEKVAEEKLGAQLEILDPVTY 721
           KLR KAEKVAEEKLGAQL+IL PV Y
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206


>ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform 1 [Cucumis
           sativus]
          Length = 241

 Score =  373 bits (957), Expect = e-101
 Identities = 179/207 (86%), Positives = 195/207 (94%)
 Frame = +2

Query: 101 KMVSGSGICAREVVVDARHHMLGRLSSILAKELLNGQRVTVVRCEEICLSGGLVRQKMKY 280
           KMVSGSGICA+ VVVDARHHMLGRLSSI+AKELLNGQ+V VVRCEEIC+SGGLVRQKMKY
Sbjct: 33  KMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKY 92

Query: 281 LRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPTPYNR 460
           +RFLRKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHKTKRGAAALARLK YEGVP PY++
Sbjct: 93  MRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDK 152

Query: 461 KKRMVIPDALKVLRLTAGHKYCLLGRLSSEVGWNHYETIKDLEKKRKEKAQVVYERKKQL 640
            KRMVIPDALKVLRL AGHKYCLLGRLSSEVGWNHY+TIK+LE+KRKE++Q  YERKKQL
Sbjct: 153 MKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQL 212

Query: 641 NKLRAKAEKVAEEKLGAQLEILDPVTY 721
           NKLR KAEKVAEEKLG QLE++ P+ Y
Sbjct: 213 NKLRIKAEKVAEEKLGPQLEVIAPIKY 239


>ref|XP_002882511.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297328351|gb|EFH58770.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 207

 Score =  372 bits (956), Expect = e-101
 Identities = 184/207 (88%), Positives = 197/207 (95%), Gaps = 1/207 (0%)
 Frame = +2

Query: 104 MVSGSGICAREVVVDARHHMLGRLSSILAKELLNGQRVTVVRCEEICLSGGLVRQKMKYL 283
           MVSGSGICA+ VVVDARHHMLGRLSSI+AKELLNGQ+V VVRCEEICLSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIVAKELLNGQKVVVVRCEEICLSGGLVRQKMKYM 60

Query: 284 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPTPYNRK 463
           RFLRKRMNTKPSHGPIHFRAPSKI WRT+RGMIPHKTKRGA ALARLKV+EGVPTPY++ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 464 KRMVIPDALKVLRLTAGHKYCLLGRLSSEVGWNHYETIK-DLEKKRKEKAQVVYERKKQL 640
           KRMVIPDALKVLRL AGHKYCLLGRLSSEVGWNHY+TIK +LE KRKE+AQVVYERKKQL
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKQELENKRKERAQVVYERKKQL 180

Query: 641 NKLRAKAEKVAEEKLGAQLEILDPVTY 721
           NKLRAKAEKVAEEKLG+QLE+L PV Y
Sbjct: 181 NKLRAKAEKVAEEKLGSQLEVLAPVKY 207


>gb|ADR71263.1| 60S ribosomal protein L13aA [Hevea brasiliensis]
          Length = 206

 Score =  372 bits (954), Expect = e-101
 Identities = 178/206 (86%), Positives = 195/206 (94%)
 Frame = +2

Query: 104 MVSGSGICAREVVVDARHHMLGRLSSILAKELLNGQRVTVVRCEEICLSGGLVRQKMKYL 283
           MVSGSGICA+ VVVDARHHMLGRL+SI+AKELLNGQ+V VVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 284 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPTPYNRK 463
           RFLRKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHKTKRG AALARLKVYEG+P PY++ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGEAALARLKVYEGIPPPYDKM 120

Query: 464 KRMVIPDALKVLRLTAGHKYCLLGRLSSEVGWNHYETIKDLEKKRKEKAQVVYERKKQLN 643
           KRMVIPDALKVLRL AGHKYCLLGRLSSEVGWNHYETIK+LE+KRKE+AQV YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYETIKELERKRKERAQVAYERKKQLT 180

Query: 644 KLRAKAEKVAEEKLGAQLEILDPVTY 721
           KLR KAEKVAEEKLG+QL+I+ P+ Y
Sbjct: 181 KLRVKAEKVAEEKLGSQLDIISPIKY 206


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