BLASTX nr result

ID: Atractylodes21_contig00001017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001017
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|XP_002326730.1| predicted protein [Populus trichocarpa] gi|2...   203   2e-50
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   199   3e-49
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   199   3e-49
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...   193   2e-47

>ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|222841773|gb|EEE79320.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  204 bits (519), Expect = 1e-50
 Identities = 96/133 (72%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
 Frame = +1

Query: 7   AGSNSI-LKPSNWKTRICNKWEQTGYCPFGSKCHFAHGAAELHRYGGGLVDIDAKDSPTA 183
           AGSN++ +KPSNWKTRICNKWE TGYCPFG+KCHFAHG  ELHRYGGGLVD +AKDS + 
Sbjct: 239 AGSNAVNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGVGELHRYGGGLVDTEAKDSSSV 298

Query: 184 MDSNKQGIMPSKTPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPFQKWKGPDK 363
              +KQG MPSKTP ET VAS  S  HSD YH+GV SQR   +I R+GQR  +KWKGPDK
Sbjct: 299 PVESKQGGMPSKTPPETAVASVTSVPHSDVYHLGVSSQRSSILIQRSGQRTHEKWKGPDK 358

Query: 364 ISRIYGDWIDDNE 402
           ISRIYGDWIDD E
Sbjct: 359 ISRIYGDWIDDIE 371


>ref|XP_002326730.1| predicted protein [Populus trichocarpa] gi|222834052|gb|EEE72529.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  203 bits (517), Expect = 2e-50
 Identities = 96/133 (72%), Positives = 108/133 (81%), Gaps = 1/133 (0%)
 Frame = +1

Query: 7   AGSNSI-LKPSNWKTRICNKWEQTGYCPFGSKCHFAHGAAELHRYGGGLVDIDAKDSPTA 183
           AGSN++ +KPSNWKTRICNKWE TGYCPFG+KCHFAHG  ELHRYGGGLV++DAKDS   
Sbjct: 240 AGSNAVNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGVGELHRYGGGLVEMDAKDSAFV 299

Query: 184 MDSNKQGIMPSKTPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPFQKWKGPDK 363
              +KQG +PSKTP ETVVAS  S  +SD YH+GVPSQ+   +I R GQR  QKWKGPDK
Sbjct: 300 PVESKQGGVPSKTPPETVVASVTSVPNSDVYHLGVPSQKSSILIQRPGQRTHQKWKGPDK 359

Query: 364 ISRIYGDWIDDNE 402
           ISRIYGDWIDD E
Sbjct: 360 ISRIYGDWIDDIE 372


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score =  199 bits (507), Expect = 3e-49
 Identities = 94/132 (71%), Positives = 105/132 (79%)
 Frame = +1

Query: 7   AGSNSILKPSNWKTRICNKWEQTGYCPFGSKCHFAHGAAELHRYGGGLVDIDAKDSPTAM 186
           +G+ S  KPSNWKTRICNKWE TGYCPFG+KCHFAHGAAELHRYGGGL++ + +DS  A 
Sbjct: 220 SGNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAP 279

Query: 187 DSNKQGIMPSKTPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPFQKWKGPDKI 366
              KQG++P K P +T+VAS PSA HSD YHV VPSQR   VI R GQR  QKWKGPDKI
Sbjct: 280 PDLKQGVLP-KAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKI 338

Query: 367 SRIYGDWIDDNE 402
           SRIYGDWIDD E
Sbjct: 339 SRIYGDWIDDIE 350


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score =  199 bits (507), Expect = 3e-49
 Identities = 94/132 (71%), Positives = 105/132 (79%)
 Frame = +1

Query: 7   AGSNSILKPSNWKTRICNKWEQTGYCPFGSKCHFAHGAAELHRYGGGLVDIDAKDSPTAM 186
           +G+ S  KPSNWKTRICNKWE TGYCPFG+KCHFAHGAAELHRYGGGL++ + +DS  A 
Sbjct: 209 SGNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAP 268

Query: 187 DSNKQGIMPSKTPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPFQKWKGPDKI 366
              KQG++P K P +T+VAS PSA HSD YHV VPSQR   VI R GQR  QKWKGPDKI
Sbjct: 269 PDLKQGVLP-KAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKI 327

Query: 367 SRIYGDWIDDNE 402
           SRIYGDWIDD E
Sbjct: 328 SRIYGDWIDDIE 339


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532956|gb|EEF34722.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 349

 Score =  193 bits (491), Expect = 2e-47
 Identities = 90/131 (68%), Positives = 101/131 (77%)
 Frame = +1

Query: 10  GSNSILKPSNWKTRICNKWEQTGYCPFGSKCHFAHGAAELHRYGGGLVDIDAKDSPTAMD 189
           GS   +KPSNWKTRICNKWE TGYCPFG+KCHFAHGAAELHRYGGGL++ + KD  +   
Sbjct: 219 GSAGNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGKDPSSVPA 278

Query: 190 SNKQGIMPSKTPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPFQKWKGPDKIS 369
             KQG + SKTP + VVAS  S  HSD YH+GVPSQR   ++ R GQR  QKWKGPDKIS
Sbjct: 279 DTKQGGVLSKTPADIVVASVASVPHSDVYHLGVPSQRPSILMQRPGQRSHQKWKGPDKIS 338

Query: 370 RIYGDWIDDNE 402
           RIYGDWIDD E
Sbjct: 339 RIYGDWIDDIE 349


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