BLASTX nr result

ID: Atractylodes21_contig00000813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000813
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1...   127   2e-27
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   125   7e-27
ref|XP_002302948.1| high mobility group family [Populus trichoca...   124   2e-26
ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cuc...   121   1e-25
ref|XP_003616293.1| HMG-Y-related protein A [Medicago truncatula...   121   1e-25

>emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1| HMG-I/Y [Pisum
           sativum]
          Length = 197

 Score =  127 bits (320), Expect = 2e-27
 Identities = 69/141 (48%), Positives = 81/141 (57%)
 Frame = -1

Query: 682 MATEEVNKPSSLPPYPEMIFEAIDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHL 503
           MAT EVNKP SLPPYPE+I +AID+L +  GSNK+ ISN+IES YG+LP GH  +L YHL
Sbjct: 1   MATREVNKPLSLPPYPELILKAIDSLNEPNGSNKSAISNYIESVYGELPEGHSVVLLYHL 60

Query: 502 NKLKESGDLMFVKNNYMRPDXXXXXXXXXXXXXXXKDQSAIETXXXXXXXXXXXXXXXXQ 323
           N++KESGDL+F KNNY+RPD               KD  A                    
Sbjct: 61  NQMKESGDLVFAKNNYLRPDPNAPPKRGRGRPPKAKDPLA------------------SP 102

Query: 322 TEAGSEIKRGRGRPKKDPNAP 260
                   R RGRP KDPNAP
Sbjct: 103 PSGAVSTPRPRGRPPKDPNAP 123


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  125 bits (315), Expect = 7e-27
 Identities = 68/141 (48%), Positives = 82/141 (58%)
 Frame = -1

Query: 682 MATEEVNKPSSLPPYPEMIFEAIDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHL 503
           MATEEVNKP SLPPYPEM+ +A+DAL +  GSNK+ IS +IESTYG+LP GH  LL +HL
Sbjct: 1   MATEEVNKPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHL 60

Query: 502 NKLKESGDLMFVKNNYMRPDXXXXXXXXXXXXXXXKDQSAIETXXXXXXXXXXXXXXXXQ 323
           NK+K+SG+L+F+KNNYM+PD               K      T                 
Sbjct: 61  NKMKDSGELVFLKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVLSP------------- 107

Query: 322 TEAGSEIKRGRGRPKKDPNAP 260
                   R RGRP KDPNAP
Sbjct: 108 -------PRPRGRPPKDPNAP 121


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  124 bits (311), Expect = 2e-26
 Identities = 68/143 (47%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
 Frame = -1

Query: 682 MATEEVNKPSSLPPYPEMIFEAIDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHL 503
           MA EE+NKP SLPPYPEMI  AI+AL +  G NKT IS +IES YGDLPAGH  LL++HL
Sbjct: 1   MAAEEINKPPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHL 60

Query: 502 NKLKESGDLMFVKNNYMRPDXXXXXXXXXXXXXXXKDQSAIETXXXXXXXXXXXXXXXXQ 323
           N++K++G+L+F KNNYM+PD               KD                       
Sbjct: 61  NRMKDTGELVFWKNNYMKPDPNAPPRRGRGRPPKPKD----------------------P 98

Query: 322 TEAGSEI--KRGRGRPKKDPNAP 260
              GS++   R RGRP KDPNAP
Sbjct: 99  LSPGSDLPPARPRGRPPKDPNAP 121


>ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
           gi|449484561|ref|XP_004156916.1| PREDICTED:
           HMG-Y-related protein A-like [Cucumis sativus]
          Length = 180

 Score =  121 bits (304), Expect = 1e-25
 Identities = 67/141 (47%), Positives = 80/141 (56%)
 Frame = -1

Query: 682 MATEEVNKPSSLPPYPEMIFEAIDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHL 503
           MAT+EVNKP SLPPYPEMIF AI+AL    GSNK+ IS +IESTYG+LP GH +LLT+HL
Sbjct: 1   MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHL 60

Query: 502 NKLKESGDLMFVKNNYMRPDXXXXXXXXXXXXXXXKDQSAIETXXXXXXXXXXXXXXXXQ 323
           N +K SGDL+F KNNYM+ D               K    + +                 
Sbjct: 61  NMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLPLSSVI--------------- 105

Query: 322 TEAGSEIKRGRGRPKKDPNAP 260
                   + RGRP KDPNAP
Sbjct: 106 -----SSPKPRGRPPKDPNAP 121


>ref|XP_003616293.1| HMG-Y-related protein A [Medicago truncatula]
           gi|217071498|gb|ACJ84109.1| unknown [Medicago
           truncatula] gi|355517628|gb|AES99251.1| HMG-Y-related
           protein A [Medicago truncatula]
           gi|388515525|gb|AFK45824.1| unknown [Medicago
           truncatula]
          Length = 204

 Score =  121 bits (304), Expect = 1e-25
 Identities = 67/141 (47%), Positives = 82/141 (58%)
 Frame = -1

Query: 682 MATEEVNKPSSLPPYPEMIFEAIDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHL 503
           MAT+EVNKP SLPPYPEMI +A++AL +  GSNK+ ISN+IES YG+LP GH  +L  HL
Sbjct: 1   MATQEVNKPLSLPPYPEMIMKALEALNEPNGSNKSSISNYIESIYGELPEGHSIVLANHL 60

Query: 502 NKLKESGDLMFVKNNYMRPDXXXXXXXXXXXXXXXKDQSAIETXXXXXXXXXXXXXXXXQ 323
           N++K++GDL+F KNNYM+PD               KD  A                    
Sbjct: 61  NQMKDNGDLVFAKNNYMKPDPNAPPKRGRGRPPKPKDPLA------------------PP 102

Query: 322 TEAGSEIKRGRGRPKKDPNAP 260
             A     R RGRP KDPNAP
Sbjct: 103 PAAVLSPPRPRGRPPKDPNAP 123


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