BLASTX nr result

ID: Atractylodes21_contig00000750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000750
         (1481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...   494   e-137
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]       493   e-137
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]           489   e-136
ref|XP_002330321.1| predicted protein [Populus trichocarpa] gi|2...   471   e-130
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g...   469   e-129

>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
            Short=Poly(A)-binding protein RBP47; AltName:
            Full=RNA-binding protein 47; Short=NplRBP47
            gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
            [Nicotiana plumbaginifolia]
          Length = 428

 Score =  494 bits (1272), Expect = e-137
 Identities = 254/363 (69%), Positives = 286/363 (78%), Gaps = 5/363 (1%)
 Frame = -1

Query: 1256 QIQSSSEDNKTIWVGDLQHWMDETYLQSCFAQTGEVSSIKLIRNKQTGQSERYGFIEFLS 1077
            QIQSSSEDNKTIW+GDLQ WMDE+YL SCF+Q GEV S+K+IRNKQTGQSERYGF+EF +
Sbjct: 75   QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 134

Query: 1076 HEAAEKVLQSYNGTMMPNTDQAFRLNWASFSTGEKRAETGSDLSIFIGDLAPDVTDTLLY 897
            H AAEKVLQSYNGTMMPNT+Q FRLNWA FSTGEKRAETGSD SIF+GDLA DVTDT+L 
Sbjct: 135  HAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLR 194

Query: 896  ETFAGRYPSVKGAKVVVDTNTGCSKGYGFVRFGDENERTRAMNEMNGQYCSSRPMRIGVA 717
            +TFA RYPS+KGAKVVVD NTG SKGYGFVRFGDE+ER+RAM EMNG YCSSR MRIGVA
Sbjct: 195  DTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVA 254

Query: 716  TPKKPPTXXXXXXXXXXXQAVLLTGGNGSFGAMPQNSQSDGDSSNTTIFVGGLDSEVTDE 537
            TPKKP             QAV+L+GG  S GA    SQSDGDSSNTTIFVGGLDSEVTDE
Sbjct: 255  TPKKPSA-----HEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDE 309

Query: 536  DLRQTFSQCGEILSVKIPVGKGCGFVQFASRSSAEDAIQNMHGTVIGKQTVRISWGKTPA 357
            +LRQ+F+Q GE++SVKIP GKGCGFVQF+ RSSA++AIQ + G +IGKQ VR+SWG++PA
Sbjct: 310  ELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPA 369

Query: 356  NRQR---MGS--NGNYYAKQXXXXXXXXXXXGMPQNQDAGMYGAADASAYGSNGYDNHQQ 192
            N+Q     GS  NG Y  +Q           G  QNQD+GMY    A    SN Y NHQQ
Sbjct: 370  NKQMRTDSGSQWNGGYNGRQ----NYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQ 425

Query: 191  PVS 183
            PVS
Sbjct: 426  PVS 428


>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score =  493 bits (1270), Expect = e-137
 Identities = 250/363 (68%), Positives = 284/363 (78%), Gaps = 5/363 (1%)
 Frame = -1

Query: 1256 QIQSSSEDNKTIWVGDLQHWMDETYLQSCFAQTGEVSSIKLIRNKQTGQSERYGFIEFLS 1077
            QIQSSSEDNKTIW+GDLQ WMDE+YL SCF+Q GEV S+K+IRNKQTGQSERYGF+EF +
Sbjct: 129  QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 188

Query: 1076 HEAAEKVLQSYNGTMMPNTDQAFRLNWASFSTGEKRAETGSDLSIFIGDLAPDVTDTLLY 897
            H AAEKVLQSYNGTMMPN +Q FRLNWA FSTGEKRAETGSD SIF+GDLA DVTDT+L 
Sbjct: 189  HAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLR 248

Query: 896  ETFAGRYPSVKGAKVVVDTNTGCSKGYGFVRFGDENERTRAMNEMNGQYCSSRPMRIGVA 717
            +TFA RYPS+KGAKVVVD NTG SKGYGFVRFGDE+ER+RAM EMNG YCSSR MRIGVA
Sbjct: 249  DTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVA 308

Query: 716  TPKKPPTXXXXXXXXXXXQAVLLTGGNGSFGAMPQNSQSDGDSSNTTIFVGGLDSEVTDE 537
            TPKKP             QAV+L+GG  S GA    SQSDGD+SNTTIFVGGLDS+VTDE
Sbjct: 309  TPKKPSA-----QQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDE 363

Query: 536  DLRQTFSQCGEILSVKIPVGKGCGFVQFASRSSAEDAIQNMHGTVIGKQTVRISWGKTPA 357
            +LRQ+F+Q GE++SVKIP GKGCGFVQF+ RSSA++AIQ + G +IGKQ VR+SWG++PA
Sbjct: 364  ELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPA 423

Query: 356  NRQRMGS-----NGNYYAKQXXXXXXXXXXXGMPQNQDAGMYGAADASAYGSNGYDNHQQ 192
            N+Q         NG Y  +Q           G  QNQD+GMY    A    SNGY NHQQ
Sbjct: 424  NKQMRADSGSQWNGGYNGRQ----NYGGYGYGASQNQDSGMYATGAAYGASSNGYGNHQQ 479

Query: 191  PVS 183
            PVS
Sbjct: 480  PVS 482


>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score =  489 bits (1260), Expect = e-136
 Identities = 253/364 (69%), Positives = 287/364 (78%), Gaps = 6/364 (1%)
 Frame = -1

Query: 1256 QIQSSSEDNKTIWVGDLQHWMDETYLQSCFAQTGEVSSIKLIRNKQTGQSERYGFIEFLS 1077
            QIQSSSEDNKTIW+GDLQ WMDE+YL SCF+Q GEV S+K+IRNKQTGQSERYGF+EF +
Sbjct: 75   QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 134

Query: 1076 HEAAEKVLQSYNGTMMPNTDQAFRLNWASFSTGEKRAETGSDLSIFIGDLAPDVTDTLLY 897
            H AAEKVLQSYNGTMMPN +Q FRLNWA FSTGEKRAETGSD SIF+GDLA DVTDT+L 
Sbjct: 135  HAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLR 194

Query: 896  ETFAGRYPSVKGAKVVVDTNTGCSKGYGFVRFGDENERTRAMNEMNGQYCSSRPMRIGVA 717
            +TFA RYPS+KGAKVVVD NTG SKGYGFVRFGDE+ER+RAM EMNG YCSSR MRIGVA
Sbjct: 195  DTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVA 254

Query: 716  TPKKPPTXXXXXXXXXXXQAVLLTGGNGSFGAMPQNSQSDGDSSNTTIFVGGLDSEVTDE 537
            TPKKP             QAV+L+GG  S GA    SQSDGD+SNTTIFVGGLDS+VTDE
Sbjct: 255  TPKKPSA-----QQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDE 309

Query: 536  DLRQTFSQCGEILSVKIPVGKGCGFVQFASRSSAEDAIQNMHGTVIGKQTVRISWGKTPA 357
            +LRQ+F+Q GE++SVKIP GKGCGFVQF+ RSSA++AIQ + G +IGKQ VR+SWG+T  
Sbjct: 310  ELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRTAN 369

Query: 356  NRQRMGS----NGNYYAKQXXXXXXXXXXXGMPQNQDAGMYGAADASAYG--SNGYDNHQ 195
             + R  S    NG Y  +Q           G  QNQD+GMY A  A+AYG  SNGY NHQ
Sbjct: 370  KQMRADSGSQWNGGYNGRQ----NYGGYGYGASQNQDSGMY-ATGAAAYGASSNGYGNHQ 424

Query: 194  QPVS 183
            QPVS
Sbjct: 425  QPVS 428


>ref|XP_002330321.1| predicted protein [Populus trichocarpa] gi|222871356|gb|EEF08487.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  471 bits (1212), Expect = e-130
 Identities = 236/344 (68%), Positives = 277/344 (80%), Gaps = 1/344 (0%)
 Frame = -1

Query: 1256 QIQSSSEDNKTIWVGDLQHWMDETYLQSCFAQTGEVSSIKLIRNKQTGQSERYGFIEFLS 1077
            Q Q S+E+ KTIWVGDL HWMDE YL +CF+ TGEVSS+K+IRNKQTGQ E YGF+EF S
Sbjct: 56   QQQGSNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYS 115

Query: 1076 HEAAEKVLQSYNGTMMPNTDQAFRLNWASFSTGEKRAETGSDLSIFIGDLAPDVTDTLLY 897
              AAEKVLQSY+G+MMPNT+Q FRLNWASF+ GE+RA+ GSDLSIF+GDLA DVTD++L 
Sbjct: 116  RAAAEKVLQSYSGSMMPNTEQPFRLNWASFA-GERRADPGSDLSIFVGDLAADVTDSMLQ 174

Query: 896  ETFAGRYPSVKGAKVVVDTNTGCSKGYGFVRFGDENERTRAMNEMNGQYCSSRPMRIGVA 717
            ETFAG+YPSVKGAKVV+D+NTG SKGYGFVRFGDENE+TRAM EMNG +CSSRPMRIGVA
Sbjct: 175  ETFAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVA 234

Query: 716  TPKKPPTXXXXXXXXXXXQAVLLTGGNGSFGAMPQNSQSDGDSSNTTIFVGGLDSEVTDE 537
            TPKKP              A++L GG+ S GAM Q SQSDGDS+NTTIFVGG+DS+VTDE
Sbjct: 235  TPKKPSAYQQQYSSQ----ALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDE 290

Query: 536  DLRQTFSQCGEILSVKIPVGKGCGFVQFASRSSAEDAIQNMHGTVIGKQTVRISWGKTPA 357
            DLRQ FSQ GE++SVKIPVGKGC FVQFA+R +AEDA+Q+++GT IGKQTVR+SWG+TPA
Sbjct: 291  DLRQPFSQFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPA 350

Query: 356  NRQRMGSNGN-YYAKQXXXXXXXXXXXGMPQNQDAGMYGAADAS 228
            N+Q  G +GN ++               MP NQD GMY AA AS
Sbjct: 351  NKQWRGDHGNQWHGGYFGGQGYAGYGYAMPPNQDPGMYVAAAAS 394


>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] gi|40804404|gb|AAR91698.1|
            DNA-binding protein [Solanum lycopersicum]
          Length = 428

 Score =  469 bits (1206), Expect = e-129
 Identities = 244/367 (66%), Positives = 286/367 (77%), Gaps = 11/367 (2%)
 Frame = -1

Query: 1250 QSSSEDNKTIWVGDLQHWMDETYLQSCFAQTGEVSSIKLIRNKQTGQSERYGFIEFLSHE 1071
            Q++SEDN+TIW+GDLQ WMDE YL +CFAQ GEV S+K+IRNKQTGQSERYGFIEF +HE
Sbjct: 72   QNASEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHE 131

Query: 1070 AAEKVLQSYNGTMMPNTDQAFRLNWASFSTGEKRAE------TGSDLSIFIGDLAPDVTD 909
            AAEKVLQSYNGTMMPN +Q FRLNW++FS+GEKRA+      +GSDLSIF+GDLA DVTD
Sbjct: 132  AAEKVLQSYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTD 191

Query: 908  TLLYETFAGRYPSVKGAKVVVDTNTGCSKGYGFVRFGDENERTRAMNEMNGQYCSSRPMR 729
            T+L +TF+ RYPSVKGAKVV+D+NTG SKGYGFVRF DE+ER+RAM EMNG YCSSR MR
Sbjct: 192  TMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMR 251

Query: 728  IGVATPKKPPTXXXXXXXXXXXQAVLLTGGNGSFGAMPQNSQSDGDSSNTTIFVGGLDSE 549
            IGVATPKKP             QAV+L GG+ S GA  Q SQ+D D SNTT+FVGGLDSE
Sbjct: 252  IGVATPKKP-----SPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSE 306

Query: 548  VTDEDLRQTFSQCGEILSVKIPVGKGCGFVQFASRSSAEDAIQNMHGTVIGKQTVRISWG 369
            VTDE+LRQ+FSQ G ++SVKIP GKGCGFVQF+ RS+AEDAI+ ++GTVIG QTVR+SWG
Sbjct: 307  VTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWG 366

Query: 368  KTPANRQ-RMGS----NGNYYAKQXXXXXXXXXXXGMPQNQDAGMYGAADASAYGSNGYD 204
            + PAN+Q R  S    NG YY +Q           G  Q+QD+ MYGA  A    SNGY 
Sbjct: 367  RNPANKQFRTDSGSQWNGGYYGRQ----NYGGYGYGASQSQDS-MYGAGAAHGASSNGYG 421

Query: 203  NHQQPVS 183
            NH+Q VS
Sbjct: 422  NHEQSVS 428