BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000656
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...    58   7e-07
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...    55   8e-06
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...    55   8e-06
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...    55   8e-06
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]       55   8e-06

>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/30 (80%), Positives = 25/30 (83%)
 Frame = -3

Query: 91  SQTTCEYDYRPHPNECSGSDLDGDIYFVCW 2
           S  T  +D RPHPNECSGSDLDGDIYFVCW
Sbjct: 807 SDPTLCFDDRPHPNECSGSDLDGDIYFVCW 836


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 64  RPHPNECSGSDLDGDIYFVCW 2
           RPHPNECSGSDLDGDIYFVCW
Sbjct: 787 RPHPNECSGSDLDGDIYFVCW 807


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 64  RPHPNECSGSDLDGDIYFVCW 2
           RPHPNECSGSDLDGDIYFVCW
Sbjct: 787 RPHPNECSGSDLDGDIYFVCW 807


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 64  RPHPNECSGSDLDGDIYFVCW 2
           RPHPNECSGSDLDGDIYFVCW
Sbjct: 788 RPHPNECSGSDLDGDIYFVCW 808


>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
          Length = 1115

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -3

Query: 64  RPHPNECSGSDLDGDIYFVCW 2
           RPHPNECSGSDLDGDIYFVCW
Sbjct: 801 RPHPNECSGSDLDGDIYFVCW 821