BLASTX nr result

ID: Atractylodes21_contig00000647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000647
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    74   5e-11
ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-06
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    57   7e-06

>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
 Frame = +2

Query: 74   YNPKVFGKPALGEVGIWLSYWPIGNALGIGDEVNVSIVVMKGLDIHDCGASLVYTDEEVA 253
            Y+P  +G P   E  +WLS+W  G+ L +GDEV++ + +  GL +  CG  L+Y +E   
Sbjct: 1055 YSPTFYGMPKPLEEMLWLSHWTFGDQLEVGDEVHILVEMASGLTVKKCGIRLIYEEESTT 1114

Query: 254  YETLQHNMECG---EILGGDLSGFQLSTGAYYLCRRDFFELMEVGRLTPDW-----FRIL 409
             E  + +        +   D+  ++L T +YYLC   F      GR   DW     +  +
Sbjct: 1115 QEIAESSSSSSWYRTMADTDMEAYELGTASYYLCHHKFQTHQGSGRY--DWDNLSGYEYI 1172

Query: 410  FGDTIDYTEIRGW 448
            F + ++  E   W
Sbjct: 1173 FEERMEDPETEDW 1185


>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +2

Query: 74  YNPKVFGKPALGEVGIWLSYWPIG-NALGIGDEVNVSIVVMKGLDIHDCGASLVYTDEEV 250
           YNP V+G P +GE  +WLS+W  G + L +GD+VNVS  V     +  CG  LVY  E+ 
Sbjct: 356 YNPIVYGVPQIGEDMLWLSHWRFGTDQLEVGDQVNVSASVTPDFQVKKCGVHLVYEQED- 414

Query: 251 AYETLQHNMECGEILGGDLSGFQ 319
              TL +N    EI+     GFQ
Sbjct: 415 -NYTLLNN---EEIVQSSSIGFQ 433


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
 Frame = +2

Query: 53   TNGVDLMYNPKVFGKPALGEVG-IWLSYWPIGNALGIGDEVNVSIVVMKGLDIHDCGASL 229
            T G +  Y+P  +  P   +   +WLSYW  G    +GD+VNVS+ +  G  + +CG  +
Sbjct: 959  TKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGGEFEVGDKVNVSVRMPFGYYVKECGIRI 1018

Query: 230  VYTDEE------VAYETLQHNMECGEILGGDLSGFQLSTGAYYLCRRDFFELMEVGRLTP 391
            VY + E       A     ++     I   DLS +Q+    Y+L    F    E+ +L P
Sbjct: 1019 VYEENEKDNQSNTADIIPSNSFWHQNITDRDLSPYQVGKSVYFLHHHPFTTPDEILKLAP 1078


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