BLASTX nr result

ID: Atractylodes21_contig00000542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000542
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524746.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll ...    71   8e-11
ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein C...    70   1e-10
gb|ACU23773.1| unknown [Glycine max]                                   70   1e-10
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...    70   2e-10
emb|CBI20065.3| unnamed protein product [Vitis vinifera]               70   2e-10

>ref|XP_003524746.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll a-b binding protein
           CP24 10A, chloroplastic-like [Glycine max]
          Length = 258

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = -3

Query: 176 MATATSAAVLNGLGSPFLTGAKRTHTL-SAPIGATTAAVSAPRRLVIAAAVAPKKSWIP 3
           MA ATS+AVLNG GS FL G KR+H L +A IG    AV +P R+++A A APKKSWIP
Sbjct: 1   MAAATSSAVLNGFGSHFLCGGKRSHALLAAGIGGKVGAVVSPXRVIVAVAAAPKKSWIP 59


>ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
           chloroplastic-like isoform 1 [Glycine max]
           gi|356524852|ref|XP_003531042.1| PREDICTED: chlorophyll
           a-b binding protein CP24 10A, chloroplastic-like isoform
           2 [Glycine max]
          Length = 258

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = -3

Query: 176 MATATSAAVLNGLGSPFLTGAKRTHT-LSAPIGATTAAVSAPRRLVIAAAVAPKKSWIP 3
           MA ATS+AVLNG GS FL G KR+H  L+A IG    A  +P+R+++A A APKKSWIP
Sbjct: 1   MAAATSSAVLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIP 59


>gb|ACU23773.1| unknown [Glycine max]
          Length = 258

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = -3

Query: 176 MATATSAAVLNGLGSPFLTGAKRTHT-LSAPIGATTAAVSAPRRLVIAAAVAPKKSWIP 3
           MA ATS+AVLNG GS FL G KR+H  L+A IG    A  +P+R+++A A APKKSWIP
Sbjct: 1   MAAATSSAVLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIP 59


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = -3

Query: 176 MATATSAAVLNGLGSPFLTGAKRTHTLSA-PIGATTAAVSAPRRLVIAAAVAPKKSWIP 3
           MA ATS AVLNGLGS FL+G  R+ TL A  IG       +PRRL++ AA APKKSWIP
Sbjct: 1   MAAATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIP 59


>emb|CBI20065.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/57 (70%), Positives = 46/57 (80%), Gaps = 2/57 (3%)
 Frame = -3

Query: 167 ATSAAVLNGLGSPFLTGAKRTHT-LSAPIGATT-AAVSAPRRLVIAAAVAPKKSWIP 3
           ATSAAVLNGLGSPFLTG KR+ + LSA + A   AAV APRRL++ AA APKKSW+P
Sbjct: 3   ATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAA-APKKSWLP 58


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