BLASTX nr result

ID: Atractylodes21_contig00000524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000524
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_004170583.1| PREDICTED: succinate dehydrogenase [ubiquino...   115   4e-24
ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquino...   115   4e-24
ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002866741.1| succinate dehydrogenase 1-1 [Arabidopsis lyr...   110   1e-22

>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/97 (61%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
 Frame = +1

Query: 46  MWRCVSRAIRIP--SRRSTSADFLSH--RFFSSESNAGRSSYTIVDHTYDXXXXXXXXXX 213
           MWRCV+R +R+P  ++RS++  F SH  RFFS+++  GRSSYT+VDHTYD          
Sbjct: 1   MWRCVARGLRLPCSTKRSSNDSFRSHISRFFSTDTTGGRSSYTVVDHTYDAVVVGAGGAG 60

Query: 214 XXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAA 324
                 LSEHGFNTACITKLFPTRSHTVAAQGGINAA
Sbjct: 61  LRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAA 97


>ref|XP_004170583.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like, partial [Cucumis sativus]
          Length = 186

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/99 (62%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
 Frame = +1

Query: 46  MWRCVSRAIRIPS---RRSTSADFLSH---RFFSSESNAGRSSYTIVDHTYDXXXXXXXX 207
           MWRCVSR +R  S   R+S+  D L     RFFS++S AGRSSYT+VDHTYD        
Sbjct: 1   MWRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 208 XXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAA 324
                   LSEHGFNTACITKLFPTRSHTVAAQGGINAA
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAA 99


>ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like [Cucumis sativus]
          Length = 635

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/99 (62%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
 Frame = +1

Query: 46  MWRCVSRAIRIPS---RRSTSADFLSH---RFFSSESNAGRSSYTIVDHTYDXXXXXXXX 207
           MWRCVSR +R  S   R+S+  D L     RFFS++S AGRSSYT+VDHTYD        
Sbjct: 1   MWRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGG 60

Query: 208 XXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAA 324
                   LSEHGFNTACITKLFPTRSHTVAAQGGINAA
Sbjct: 61  AGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAA 99


>ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/100 (60%), Positives = 67/100 (67%), Gaps = 7/100 (7%)
 Frame = +1

Query: 46  MWRCVSRAIRIPSRRST-------SADFLSHRFFSSESNAGRSSYTIVDHTYDXXXXXXX 204
           MWRCV+R +R+PS  S+       S  F S RFFS++S  G SSYT+VDHTYD       
Sbjct: 1   MWRCVARGLRLPSSSSSTKILSNDSFRFHSTRFFSADSTGGGSSYTVVDHTYDAVVVGAG 60

Query: 205 XXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAA 324
                    LSEHGFNTACITKLFPTRSHTVAAQGGINAA
Sbjct: 61  GAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAA 100


>ref|XP_002866741.1| succinate dehydrogenase 1-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297312576|gb|EFH43000.1| succinate dehydrogenase 1-1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 634

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/98 (62%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
 Frame = +1

Query: 46  MWRCVSRAIRIPSRRSTSA-DFLS----HRFFSSESNAGRSSYTIVDHTYDXXXXXXXXX 210
           MWRCVSR  R PS +++S  D +S     RFFS+ S   RSSYTIVDHTYD         
Sbjct: 1   MWRCVSRGFRAPSSKTSSLFDGVSGSRFSRFFSTGSTDTRSSYTIVDHTYDAVVVGAGGA 60

Query: 211 XXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAA 324
                  LSEHGFNTACITKLFPTRSHTVAAQGGINAA
Sbjct: 61  GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAA 98


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