BLASTX nr result

ID: Atractylodes21_contig00000512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000512
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43095.1|AF053769_1 homeodomain protein [Malus x domestica]       57   1e-06
emb|CBI17588.3| unnamed protein product [Vitis vinifera]               55   8e-06

>gb|AAF43095.1|AF053769_1 homeodomain protein [Malus x domestica]
          Length = 809

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 10/52 (19%)
 Frame = -2

Query: 128 NSMSQDY---IFNFSHGFQRPS-------QDQQQNHIGHQIRRDKLRVQGFE 3
           NSMSQDY   IF FS+GF+R +       Q QQQ+H+  QIRR+KLRVQGFE
Sbjct: 35  NSMSQDYHQGIFTFSNGFERSAMTTHQEQQQQQQHHLAQQIRREKLRVQGFE 86


>emb|CBI17588.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
 Frame = -2

Query: 149 HKNKFAFNSMSQDY---IFNFSHGFQRPS-----QDQQQNHIGHQIRRDKLRVQG 9
           HK+ FA NSMSQD+   IF+FS+GF+R +     Q QQQ HI  QIRRDKLR  G
Sbjct: 54  HKSNFA-NSMSQDFHQGIFSFSNGFERSAVTHQEQQQQQQHITQQIRRDKLRTAG 107


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