BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00029517
         (672 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHM99776.1| Retrovirus-related Pol polyprotein from transposo...   147   1e-54
dbj|GAU44417.1| hypothetical protein TSUD_100640 [Trifolium subt...   140   1e-53
gb|PNX98468.1| putative copia-type polyprotein, partial [Trifoli...   137   1e-53
dbj|GAU18816.1| hypothetical protein TSUD_81050 [Trifolium subte...   130   8e-53
dbj|GAU44851.1| hypothetical protein TSUD_112250 [Trifolium subt...   141   3e-51
gb|PNY05002.1| putative copia-type polyprotein [Trifolium pratense]   138   6e-51
dbj|GAU22886.1| hypothetical protein TSUD_376970 [Trifolium subt...   142   3e-49
dbj|GAU31479.1| hypothetical protein TSUD_386430 [Trifolium subt...   133   4e-48
dbj|GAU26253.1| hypothetical protein TSUD_224440 [Trifolium subt...   131   1e-47
dbj|GAU46598.1| hypothetical protein TSUD_99480 [Trifolium subte...   128   2e-47
dbj|GAU50018.1| hypothetical protein TSUD_331710 [Trifolium subt...   129   3e-47
dbj|GAU45882.1| hypothetical protein TSUD_401080, partial [Trifo...   127   8e-47
gb|KYP32045.1| Retrovirus-related Pol polyprotein from transposo...   136   2e-46
dbj|GAU47720.1| hypothetical protein TSUD_285070 [Trifolium subt...   125   3e-46
dbj|GAU30479.1| hypothetical protein TSUD_18590 [Trifolium subte...   126   3e-46
dbj|GAU26464.1| hypothetical protein TSUD_294300 [Trifolium subt...   127   4e-46
dbj|GAU32405.1| hypothetical protein TSUD_220940 [Trifolium subt...   127   8e-46
gb|PNX93875.1| copia-type polyprotein [Trifolium pratense]            122   1e-45
dbj|GAU47093.1| hypothetical protein TSUD_369260 [Trifolium subt...   127   4e-45
dbj|GAU51300.1| hypothetical protein TSUD_412660 [Trifolium subt...   124   1e-44

>gb|KHM99776.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Glycine soja]
          Length = 466

 Score =  147 bits (372), Expect(2) = 1e-54
 Identities = 64/123 (52%), Positives = 96/123 (78%)
 Frame = +3

Query: 93  RSICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILD 272
           R++  EG+G +MIK++DG +C+I+ VLYVP +KSNL S+GQLL+KGYKM++EDC MK+ D
Sbjct: 225 RTMKVEGVGKVMIKKRDGSKCFISGVLYVPGMKSNLLSIGQLLEKGYKMVLEDCAMKVYD 284

Query: 273 VKSRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNM 452
            + RL++KA LSKNRT +  ++++ ++C+ +T+D + WLWH R+ HLNF  L+ L  K +
Sbjct: 285 NERRLLIKANLSKNRTFKAELDVLVQQCLASTIDKEEWLWHFRYGHLNFTDLNRLQSKGI 344

Query: 453 VKG 461
           VKG
Sbjct: 345 VKG 347



 Score = 94.4 bits (233), Expect(2) = 1e-54
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = +2

Query: 455 EGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVITVGGNSYF 634
           +G+P IK P ++CGEC KSK +RNSF + V  RS  KL VV+ DVC P++ +T GGN YF
Sbjct: 346 KGIPHIKVPNDVCGECIKSKMSRNSFNQNVSTRSKRKLQVVFSDVCGPIQHMTPGGNKYF 405

Query: 635 VSFIDEYTKKMW 670
           V+FIDE+++K+W
Sbjct: 406 VTFIDEFSRKLW 417


>dbj|GAU44417.1| hypothetical protein TSUD_100640 [Trifolium subterraneum]
          Length = 1318

 Score =  140 bits (352), Expect(3) = 1e-53
 Identities = 68/118 (57%), Positives = 88/118 (74%), Gaps = 1/118 (0%)
 Frame = +3

Query: 111 GMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSRLV 290
           GMG +++KRKDG E  IN+VLYVP + SNL SLGQLL+K Y M +E+ E+KI D KSRL+
Sbjct: 369 GMGTVLVKRKDGHESVINEVLYVPSMTSNLISLGQLLEKDYTMKLENRELKIYDAKSRLI 428

Query: 291 LKAALSKNRTLETAIEIVDEKCMIT-TVDDDNWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           LKA LS NRT +  I ++D  C+ + T  ++NW+WH RF HLNF+SLSML  K+MV G
Sbjct: 429 LKAPLSNNRTFKIEINVIDHHCLASITNPEENWIWHHRFGHLNFKSLSMLNSKDMVHG 486



 Score = 97.1 bits (240), Expect(3) = 1e-53
 Identities = 41/79 (51%), Positives = 58/79 (73%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           ++ K+   GLP IK P E+C +CC +KQ RNSFK  +  +ST KL +VY DVC P EV +
Sbjct: 478 LNSKDMVHGLPQIKTPSEVCEDCCAAKQTRNSFKNELPMKSTHKLEMVYSDVCGPFEVKS 537

Query: 614 VGGNSYFVSFIDEYTKKMW 670
           +GGN+YF++FID+YT+ +W
Sbjct: 538 IGGNNYFLTFIDDYTRHVW 556



 Score = 22.7 bits (47), Expect(3) = 1e-53
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 4   EYDDSENSDSEHPLLAENDNTAVDNKELW 90
           ++ +   SDS   LL    N+ VD   LW
Sbjct: 301 QFANGGGSDSNDSLLMAITNSEVDKSNLW 329


>gb|PNX98468.1| putative copia-type polyprotein, partial [Trifolium pratense]
          Length = 1267

 Score =  137 bits (346), Expect(2) = 1e-53
 Identities = 67/118 (56%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
 Frame = +3

Query: 111 GMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSRLV 290
           GMG + + RKDG E  IN+VLYVP + SNL SLGQLL+KGY+M M + E+KI D KSRL+
Sbjct: 369 GMGTVSVMRKDGHESVINEVLYVPSMTSNLISLGQLLEKGYEMSMANRELKIYDAKSRLI 428

Query: 291 LKAALSKNRTLETAIEIVDEKCM-ITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           LKA LS NRT +  I ++D  C+ + T  ++NW WH R+ HLNF+SLSML  K+MV G
Sbjct: 429 LKAPLSNNRTFKAEINVIDHHCLSLITNSEENWKWHHRYGHLNFKSLSMLQSKDMVHG 486



 Score =  100 bits (250), Expect(2) = 1e-53
 Identities = 43/76 (56%), Positives = 58/76 (76%)
 Frame = +2

Query: 443 KEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVITVGG 622
           K+   GLP IKAP E+CGECC +KQARNSFK  +  +S +KL +VY DVC P E  ++GG
Sbjct: 481 KDMVHGLPQIKAPSEVCGECCAAKQARNSFKSDLHMKSAQKLEMVYSDVCGPFEEKSIGG 540

Query: 623 NSYFVSFIDEYTKKMW 670
           N+YF++FID+YT+ +W
Sbjct: 541 NNYFLTFIDDYTRHVW 556


>dbj|GAU18816.1| hypothetical protein TSUD_81050 [Trifolium subterraneum]
          Length = 1380

 Score =  130 bits (328), Expect(2) = 8e-53
 Identities = 61/121 (50%), Positives = 85/121 (70%)
 Frame = +3

Query: 99  ICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVK 278
           + AEG+G + I+R+DG +  ++DVLYVP +KSNL SLGQLL+KGY M M    M++ D K
Sbjct: 364 VIAEGIGKVAIRREDGTKVTVSDVLYVPQMKSNLLSLGQLLEKGYSMNMNGNYMEVFDSK 423

Query: 279 SRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMVK 458
            ++V K ++S+NRT +  +  +D+KC+I   DD  W WH+R  HLNF SL ML +KNMV 
Sbjct: 424 RKVVSKVSMSRNRTFKVGVNSIDQKCLIAQEDDIMWKWHKRMGHLNFNSLKMLQKKNMVV 483

Query: 459 G 461
           G
Sbjct: 484 G 484



 Score =  105 bits (261), Expect(2) = 8e-53
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           + +K    GLP I+ PKE+CG+CC+ KQ R S+K  +  R T+KL +++ DVC P EV +
Sbjct: 476 LQKKNMVVGLPQIEEPKEICGKCCEGKQPRKSYKSAIPTRGTKKLAIIHSDVCGPFEVKS 535

Query: 614 VGGNSYFVSFIDEYTKKMW 670
           +GGNSYFVSFID+YTKKMW
Sbjct: 536 IGGNSYFVSFIDDYTKKMW 554


>dbj|GAU44851.1| hypothetical protein TSUD_112250 [Trifolium subterraneum]
          Length = 1133

 Score =  141 bits (355), Expect(2) = 3e-51
 Identities = 64/119 (53%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
 Frame = +3

Query: 108 EGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSRL 287
           EG+G I++K +DG+E  + DVLYVP +KSNL S+GQLL+K Y + M D E+K+ D K RL
Sbjct: 320 EGIGSILVKSEDGQEAVMTDVLYVPSMKSNLISIGQLLEKNYSVEMHDKELKLFDAKDRL 379

Query: 288 VLKAALSKNRTLETAIEIVDEKCMITTVDDD-NWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           +LKA LS N+T + +I ++D++C++TTV++D NW+WH R+ HLNFRSL++L  K MV G
Sbjct: 380 ILKAPLSNNKTFQISINMIDQQCLVTTVNEDQNWIWHHRYGHLNFRSLNLLNLKKMVHG 438



 Score = 89.4 bits (220), Expect(2) = 3e-51
 Identities = 38/76 (50%), Positives = 57/76 (75%)
 Frame = +2

Query: 443 KEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVITVGG 622
           K+   GLP IK PK+LC ECC +K AR +FK  +  +S++KL +++ DVC P+EV ++GG
Sbjct: 433 KKMVHGLPHIKTPKQLCKECCVAKPARKAFKHDLPMKSSQKLQLIHSDVCGPLEVQSMGG 492

Query: 623 NSYFVSFIDEYTKKMW 670
           N YF++FIDE+T+ +W
Sbjct: 493 NYYFLTFIDEFTRHVW 508


>gb|PNY05002.1| putative copia-type polyprotein [Trifolium pratense]
          Length = 762

 Score =  138 bits (348), Expect(2) = 6e-51
 Identities = 62/122 (50%), Positives = 90/122 (73%)
 Frame = +3

Query: 96  SICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDV 275
           S+ AEG+G I I+ KDGK+  I+DVLYVP +KSNL S+GQLL+K Y + MED  +++ D 
Sbjct: 354 SVRAEGIGKIKIRSKDGKDALISDVLYVPTMKSNLISIGQLLEKNYVVKMEDKVLRVFDS 413

Query: 276 KSRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMV 455
           K RL+LKA ++K RT +  + ++D  C++ T  +++W+WHQR+ HLNF+ LS+L  KNMV
Sbjct: 414 KRRLILKAPMTKQRTFKIGLNVIDGNCLLATASNEDWIWHQRYGHLNFKDLSILQRKNMV 473

Query: 456 KG 461
            G
Sbjct: 474 NG 475



 Score = 91.3 bits (225), Expect(2) = 6e-51
 Identities = 39/79 (49%), Positives = 54/79 (68%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           + RK    GLP IK   ++C +CC SKQ+RNS+   +  R+T +L  ++ DVC P E  +
Sbjct: 467 LQRKNMVNGLPQIKVSDQVCDKCCISKQSRNSYNTEIPSRATRRLEAIHSDVCGPFEEKS 526

Query: 614 VGGNSYFVSFIDEYTKKMW 670
            GGNSYFVSFIDE+T+K+W
Sbjct: 527 TGGNSYFVSFIDEFTRKLW 545


>dbj|GAU22886.1| hypothetical protein TSUD_376970 [Trifolium subterraneum]
          Length = 1121

 Score =  142 bits (357), Expect(2) = 3e-49
 Identities = 65/118 (55%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
 Frame = +3

Query: 111 GMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSRLV 290
           G+G I++KRKDG+E  I DVLYVP +KSNL S+ QLL+K Y + M D E+K+ D K RL+
Sbjct: 340 GIGSILVKRKDGQEVVITDVLYVPSMKSNLISICQLLEKNYSVEMHDKELKLFDAKDRLI 399

Query: 291 LKAALSKNRTLETAIEIVDEKCMITTVDDD-NWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           LKA LS N+T + +I ++D++C++TTV++D NW+WH R+ HLNF+SL++L  KNMV G
Sbjct: 400 LKAPLSNNKTFQVSINMIDQQCLVTTVNEDQNWIWHHRYGHLNFKSLNLLNLKNMVHG 457



 Score = 82.0 bits (201), Expect(2) = 3e-49
 Identities = 35/73 (47%), Positives = 54/73 (73%)
 Frame = +2

Query: 443 KEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVITVGG 622
           K    GLP IK PK+LC ECC +K AR +FK  +  +S++KL +++ DVC P+E+ ++GG
Sbjct: 452 KNMVHGLPHIKPPKQLCKECCIAKSARKAFKHDLPMKSSQKLQLIHSDVCGPLEMQSMGG 511

Query: 623 NSYFVSFIDEYTK 661
           N YF++F+DE+T+
Sbjct: 512 NYYFLTFMDEFTR 524


>dbj|GAU31479.1| hypothetical protein TSUD_386430 [Trifolium subterraneum]
          Length = 1019

 Score =  133 bits (334), Expect(2) = 4e-48
 Identities = 56/119 (47%), Positives = 88/119 (73%)
 Frame = +3

Query: 105 AEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSR 284
           AEG+G + I+ K+G + +INDVLY+P +K NL S+GQL++K YK+++ED  MK++D   +
Sbjct: 345 AEGVGVVCIRSKNGDQAFINDVLYIPSIKCNLLSVGQLIEKDYKIVIEDRMMKLMDSNRK 404

Query: 285 LVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           L+LKA +S+NRT +  + +++  C+ T ++ D+W WH RF HLNFR L+M+  K+MV G
Sbjct: 405 LILKAPMSRNRTFKIELNVMNHMCLATAIERDDWTWHYRFGHLNFRDLNMMSNKSMVSG 463



 Score = 87.0 bits (214), Expect(2) = 4e-48
 Identities = 37/79 (46%), Positives = 54/79 (68%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           +  K    GLP I+ P E+C +C +SK+ R+SF K V+ R+   L V+Y DVC PM+V +
Sbjct: 455 MSNKSMVSGLPKIQVPNEVCEDCVQSKKHRDSFNKDVKSRTKNVLEVIYSDVCGPMQVDS 514

Query: 614 VGGNSYFVSFIDEYTKKMW 670
            GGN YFVSF+D++ +K+W
Sbjct: 515 TGGNRYFVSFVDDHNRKLW 533


>dbj|GAU26253.1| hypothetical protein TSUD_224440 [Trifolium subterraneum]
          Length = 1312

 Score =  131 bits (329), Expect(2) = 1e-47
 Identities = 55/119 (46%), Positives = 88/119 (73%)
 Frame = +3

Query: 105 AEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSR 284
           AEG+G + I+ K+G + +INDVLY+P +K NL S+GQL++K YK+++ED  MK++D   +
Sbjct: 393 AEGVGVVCIRSKNGDQAFINDVLYIPGIKCNLLSVGQLIEKDYKIVIEDRMMKLMDSNRK 452

Query: 285 LVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           L+LKA +S+NRT +  + +++  C+ T ++ D+W WH RF HLNFR L+M+  K++V G
Sbjct: 453 LILKAPMSRNRTFKIELNVMNHMCLATAIERDDWTWHYRFGHLNFRDLNMMSNKSVVSG 511



 Score = 87.4 bits (215), Expect(2) = 1e-47
 Identities = 38/79 (48%), Positives = 55/79 (69%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           +  K    GLP I+ P E+C +C +SKQ R+SF K V+ R+   L V+Y DVC PM+V +
Sbjct: 503 MSNKSVVSGLPKIQIPNEVCEDCVQSKQHRDSFNKDVKSRTKSVLEVIYSDVCGPMQVDS 562

Query: 614 VGGNSYFVSFIDEYTKKMW 670
            GGN YFVSF+D++++K+W
Sbjct: 563 NGGNRYFVSFVDDHSRKLW 581


>dbj|GAU46598.1| hypothetical protein TSUD_99480 [Trifolium subterraneum]
          Length = 1244

 Score =  128 bits (321), Expect(2) = 2e-47
 Identities = 57/122 (46%), Positives = 84/122 (68%)
 Frame = +3

Query: 96  SICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDV 275
           ++ A+GMG + IKRKDGK   I++VLY+P +K NL S+GQLL+  YK++ME   + + D 
Sbjct: 283 TMAAKGMGDVSIKRKDGKYSMISNVLYIPGIKCNLLSIGQLLENDYKIVMEHKLLNVFDT 342

Query: 276 KSRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMV 455
              L+LKA +SKNRT +  + ++D KC++T    D WLWH R  HLNF+ L+++ +KN V
Sbjct: 343 NGNLLLKAPISKNRTFQIELNVMDHKCLMTAYSRDEWLWHYRMGHLNFKDLTLMQKKNYV 402

Query: 456 KG 461
            G
Sbjct: 403 TG 404



 Score = 90.1 bits (222), Expect(2) = 2e-47
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           + +K Y  GLP + AP E+C EC  SK  R SF K    ++   L +VY DVC PM+V +
Sbjct: 396 MQKKNYVTGLPAMNAPDEICEECVHSKHPRGSFSKYAMSKTKSTLEIVYSDVCGPMQVDS 455

Query: 614 VGGNSYFVSFIDEYTKKMW 670
           +GGN YFVSF+D++++K+W
Sbjct: 456 IGGNKYFVSFVDDFSRKIW 474


>dbj|GAU50018.1| hypothetical protein TSUD_331710 [Trifolium subterraneum]
          Length = 1150

 Score =  129 bits (325), Expect(2) = 3e-47
 Identities = 55/118 (46%), Positives = 87/118 (73%)
 Frame = +3

Query: 108 EGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSRL 287
           EG+G + I+ K+G + +INDVLY+P +K NL S+GQL++K YK+++ED  MK++D   +L
Sbjct: 352 EGVGVVCIRSKNGDQAFINDVLYIPGIKCNLLSVGQLIEKDYKIVIEDRMMKLMDSNRKL 411

Query: 288 VLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           VLKA +S+NRT +  + +++  C+ T ++ ++W WH RF HLNFR L+M+  K+MV G
Sbjct: 412 VLKAPMSRNRTFKIELNVMNHMCLATAIERNDWTWHYRFGHLNFRDLNMMSNKSMVSG 469



 Score = 87.8 bits (216), Expect(2) = 3e-47
 Identities = 38/79 (48%), Positives = 55/79 (69%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           +  K    GLP I+ P E+C +C +SKQ R+SF K V+ R+   L V+Y DVC PM+V +
Sbjct: 461 MSNKSMVSGLPKIQVPNEVCEDCVQSKQHRDSFNKDVKSRTKSVLEVIYSDVCGPMQVDS 520

Query: 614 VGGNSYFVSFIDEYTKKMW 670
            GGN YFVSF+D++++K+W
Sbjct: 521 NGGNRYFVSFVDDHSRKLW 539


>dbj|GAU45882.1| hypothetical protein TSUD_401080, partial [Trifolium subterraneum]
          Length = 627

 Score =  127 bits (319), Expect(2) = 8e-47
 Identities = 57/122 (46%), Positives = 85/122 (69%)
 Frame = +3

Query: 96  SICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDV 275
           ++ A+GMG + IKRKDGK   I++VLY+P +K NL S+GQLL+K YK++ME   + + D 
Sbjct: 341 TMAAKGMGDVSIKRKDGKYSMISNVLYIPGIKCNLLSIGQLLEKDYKIVMEHKLLNVFDT 400

Query: 276 KSRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMV 455
              L+LKA +SKNRT +  + ++D KC++T    D WLW+ R  HLNF+ L+++ +KN V
Sbjct: 401 NGNLLLKAPMSKNRTFQIELNVMDHKCLMTAYSRDEWLWNYRMGHLNFKDLTLMQKKNYV 460

Query: 456 KG 461
            G
Sbjct: 461 TG 462



 Score = 88.6 bits (218), Expect(2) = 8e-47
 Identities = 36/79 (45%), Positives = 53/79 (67%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           + +K Y  GLP + AP E+C  C  SKQ R +F K    ++   L +VY DVC PM+V +
Sbjct: 454 MQKKNYVTGLPAMNAPDEICEVCAHSKQPRGNFSKYAMSKTKSTLEIVYSDVCGPMQVDS 513

Query: 614 VGGNSYFVSFIDEYTKKMW 670
           +GGN YFVSF+D++++K+W
Sbjct: 514 IGGNKYFVSFVDDFSRKIW 532


>gb|KYP32045.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1205

 Score =  136 bits (342), Expect(2) = 2e-46
 Identities = 64/122 (52%), Positives = 89/122 (72%)
 Frame = +3

Query: 96  SICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDV 275
           SI AEG+G I I+RKDGK  YI++VLYVP +KSNL SLGQLL+KGY M ++D  +K+ D 
Sbjct: 303 SIDAEGIGKISIQRKDGKHSYISNVLYVPKMKSNLLSLGQLLEKGYTMTLKDKVLKVFDC 362

Query: 276 KSRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMV 455
            ++L+LKA LS NRT +  I++   +C+++ V  + W WHQR+ HLNF+SL ML +  +V
Sbjct: 363 NNKLILKAPLSSNRTFKVGIQVDGNQCLVSRVAHEGWTWHQRYGHLNFKSLDMLSKTGIV 422

Query: 456 KG 461
            G
Sbjct: 423 TG 424



 Score = 78.2 bits (191), Expect(2) = 2e-46
 Identities = 38/71 (53%), Positives = 46/71 (64%)
 Frame = +2

Query: 458 GLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVITVGGNSYFV 637
           GLP IK P ELC EC  SKQ RNSF   V  +S + L +VY DVC P EV ++GGN YF 
Sbjct: 424 GLPTIKTPNELCNECLTSKQTRNSFVAHVPTKSVKALEMVYSDVCGPFEVNSLGGNRYF- 482

Query: 638 SFIDEYTKKMW 670
            F  ++T+K W
Sbjct: 483 -FHHDFTRKTW 492


>dbj|GAU47720.1| hypothetical protein TSUD_285070 [Trifolium subterraneum]
          Length = 1194

 Score =  125 bits (313), Expect(2) = 3e-46
 Identities = 56/122 (45%), Positives = 82/122 (67%)
 Frame = +3

Query: 96  SICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDV 275
           ++ A+GM  + IKRKDGK   I++VLY+P +K N  S+GQLL+K YK++ME   + + D 
Sbjct: 384 TMAAKGMSDVSIKRKDGKYSMISNVLYIPGIKCNFLSIGQLLEKDYKIVMEHKLLNVFDT 443

Query: 276 KSRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMV 455
              L+LKA +SKNRT +  + ++D KC++T    D WLWH R  HLNF+ L+++  KN V
Sbjct: 444 NGNLLLKAPMSKNRTFQIELNVMDHKCLMTAYSRDEWLWHYRMGHLNFKDLTLMQMKNYV 503

Query: 456 KG 461
            G
Sbjct: 504 TG 505



 Score = 89.0 bits (219), Expect(2) = 3e-46
 Identities = 38/76 (50%), Positives = 53/76 (69%)
 Frame = +2

Query: 443 KEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVITVGG 622
           K Y  GLP + AP E+  EC  SKQ R SF+K V  ++   L +VY DVC PM+V ++GG
Sbjct: 500 KNYVTGLPAMNAPDEIFEECVHSKQPRGSFRKYVMSKTKSTLEIVYSDVCGPMQVDSIGG 559

Query: 623 NSYFVSFIDEYTKKMW 670
           N YFVSF+D++++K+W
Sbjct: 560 NKYFVSFVDDFSRKIW 575


>dbj|GAU30479.1| hypothetical protein TSUD_18590 [Trifolium subterraneum]
          Length = 1115

 Score =  126 bits (317), Expect(2) = 3e-46
 Identities = 56/122 (45%), Positives = 84/122 (68%)
 Frame = +3

Query: 96  SICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDV 275
           ++ A+GMG + IKRKDGK   I+++LY+P +K NL S+ QLL+K YK++ME   + + D 
Sbjct: 325 TMAAKGMGDVSIKRKDGKYSMISNMLYIPGIKCNLLSIAQLLEKDYKIVMEHKLLNVFDT 384

Query: 276 KSRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMV 455
              L+LKA +SKNRT +  + ++D KC++T    D WLWH R  HLNF+ L+++ +KN V
Sbjct: 385 NGNLLLKAPMSKNRTFQIELNVMDHKCLMTAYSRDEWLWHYRMGHLNFKDLTLMQKKNYV 444

Query: 456 KG 461
            G
Sbjct: 445 TG 446



 Score = 87.4 bits (215), Expect(2) = 3e-46
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           + +K Y  GLP + AP E+C EC  SKQ R SF+K    ++   L  VY DVC PM+V +
Sbjct: 438 MQKKNYVTGLPAMNAPDEICEECVHSKQPRGSFRKYAMSKTKSTLENVYSDVCGPMQVDS 497

Query: 614 VGGNSYFVSFIDEYTKKMW 670
           + GN YFVSF+D++++K+W
Sbjct: 498 IEGNKYFVSFVDDFSRKIW 516


>dbj|GAU26464.1| hypothetical protein TSUD_294300 [Trifolium subterraneum]
          Length = 1323

 Score =  127 bits (320), Expect(2) = 4e-46
 Identities = 54/119 (45%), Positives = 86/119 (72%)
 Frame = +3

Query: 105 AEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSR 284
           AEG+G + I+ K+G + +INDVLY+P +K NL S+GQL++K YK+++ED  M+++D   +
Sbjct: 393 AEGVGVVCIRSKNGDQAFINDVLYIPGIKCNLLSVGQLIEKHYKIVIEDRMMRLMDSNRK 452

Query: 285 LVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           L+LKA +S NRT +  + +++  C+ T ++  +W WH RF HLNFR L+M+  K+MV G
Sbjct: 453 LILKAPMSSNRTFKIELNVMNHMCLATAIERKDWTWHYRFGHLNFRDLNMMSNKSMVSG 511



 Score = 85.9 bits (211), Expect(2) = 4e-46
 Identities = 36/79 (45%), Positives = 55/79 (69%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           +  K    GLP I+ P ++C +C +SKQ R+SF K V+ R+   L V+Y DVC PM+V +
Sbjct: 503 MSNKSMVSGLPKIQVPNDVCEDCAQSKQHRDSFNKDVKSRTKSVLEVIYSDVCGPMQVDS 562

Query: 614 VGGNSYFVSFIDEYTKKMW 670
            GGN YFV+F+D++++K+W
Sbjct: 563 NGGNRYFVTFVDDHSRKLW 581


>dbj|GAU32405.1| hypothetical protein TSUD_220940 [Trifolium subterraneum]
          Length = 1151

 Score =  127 bits (319), Expect(2) = 8e-46
 Identities = 56/117 (47%), Positives = 84/117 (71%)
 Frame = +3

Query: 105 AEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSR 284
           AEG+G + I+ K G + +INDVLY+P +K NL S+GQL++K YK+ +ED  ++++D   +
Sbjct: 350 AEGVGVVCIRSKTGDQAFINDVLYIPGIKCNLLSVGQLIEKDYKIAIEDRMLRLMDSNIK 409

Query: 285 LVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMV 455
           L+LKA +SKNRT +  I +++  C+ T V+ D W WH RF HLNFR L+M+  K+MV
Sbjct: 410 LILKAPMSKNRTFKIEINVMNHMCLATAVERDEWTWHYRFGHLNFRDLNMMSNKSMV 466



 Score = 85.1 bits (209), Expect(2) = 8e-46
 Identities = 35/70 (50%), Positives = 52/70 (74%)
 Frame = +2

Query: 461 LPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVITVGGNSYFVS 640
           LP I+ P E+C +C +SKQ R++F K V+ R+   L V+Y DVC PM+V + GGN YFVS
Sbjct: 469 LPRIQVPNEVCEDCVQSKQHRDNFNKDVKSRTNNVLEVIYSDVCGPMQVDSTGGNKYFVS 528

Query: 641 FIDEYTKKMW 670
           F+D++++K+W
Sbjct: 529 FVDDHSRKLW 538


>gb|PNX93875.1| copia-type polyprotein [Trifolium pratense]
          Length = 1350

 Score =  122 bits (307), Expect(2) = 1e-45
 Identities = 54/118 (45%), Positives = 82/118 (69%)
 Frame = +3

Query: 108 EGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSRL 287
           +G+G + IKR+DGK   I+ VLY+P +K NL S+GQLL+K YK++ME   + +LD +  L
Sbjct: 379 KGIGDVSIKRRDGKHAVISSVLYIPGMKCNLLSVGQLLEKEYKIVMEHKLLNVLDTRGNL 438

Query: 288 VLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           +LKA +SKNRT +  + ++  KC++T    + WLWH R  HLNF+ L+++  +NMV G
Sbjct: 439 LLKAPMSKNRTFKVQLNVMKHKCLMTASSREEWLWHYRMGHLNFKDLTVMQRQNMVTG 496



 Score = 89.4 bits (220), Expect(2) = 1e-45
 Identities = 39/79 (49%), Positives = 56/79 (70%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           + R+    GLP I+ P+E+C +C +SKQ R+SF K    ++   L VVY DVC PM+V +
Sbjct: 488 MQRQNMVTGLPKIEMPEEMCEDCIQSKQHRHSFSKDALSKTKSVLEVVYSDVCGPMQVDS 547

Query: 614 VGGNSYFVSFIDEYTKKMW 670
           +GGN YFVSFID++++KMW
Sbjct: 548 IGGNKYFVSFIDDFSRKMW 566


>dbj|GAU47093.1| hypothetical protein TSUD_369260 [Trifolium subterraneum]
          Length = 1158

 Score =  127 bits (318), Expect(2) = 4e-45
 Identities = 53/119 (44%), Positives = 86/119 (72%)
 Frame = +3

Query: 105 AEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDVKSR 284
           AEG+G + I+ K G + +INDVLY+P +K NL S+GQL++K YK+++ED  M+++D   +
Sbjct: 256 AEGVGVVCIRSKGGDQAFINDVLYIPGIKCNLLSVGQLIEKDYKIVIEDRMMRLMDSNKK 315

Query: 285 LVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMVKG 461
           L+LKA +S+N T +  + +++  C+ T ++ D+W WH RF HLNFR L+++  K+MV G
Sbjct: 316 LILKAPMSRNTTFKIELNVMNHMCLATAIERDDWSWHYRFGHLNFRDLNIMSNKSMVSG 374



 Score = 83.2 bits (204), Expect(2) = 4e-45
 Identities = 36/79 (45%), Positives = 53/79 (67%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           +  K    GLP I+ P E+C +C + KQ  +SF K V+ R+   L V+Y DVC PM+V +
Sbjct: 366 MSNKSMVSGLPKIQVPNEVCEDCVQFKQHMDSFNKDVKSRTKSVLEVIYSDVCGPMQVDS 425

Query: 614 VGGNSYFVSFIDEYTKKMW 670
            GGN YFVSF+D++++K+W
Sbjct: 426 NGGNRYFVSFVDDHSRKLW 444


>dbj|GAU51300.1| hypothetical protein TSUD_412660 [Trifolium subterraneum]
          Length = 769

 Score =  124 bits (310), Expect(2) = 1e-44
 Identities = 55/122 (45%), Positives = 82/122 (67%)
 Frame = +3

Query: 96  SICAEGMG*IMIKRKDGKECYINDVLYVPDLKSNLNSLGQLLDKGYKMIMEDCEMKILDV 275
           ++ A+GMG + IKRKDGK   I++VLY+P +K N   +GQL +K YK++ME   + + D 
Sbjct: 243 TMAAKGMGDVSIKRKDGKYSMISNVLYIPGIKCNFLIIGQLFEKDYKIVMEHKLLNVFDT 302

Query: 276 KSRLVLKAALSKNRTLETAIEIVDEKCMITTVDDDNWLWHQRFVHLNFRSLSMLIEKNMV 455
              L+LKA +SKNRT +  + ++D KC++T    D WLWH R  HLNF+ L+++ +KN V
Sbjct: 303 NGNLLLKAPMSKNRTFQIELNVMDHKCLMTAYSRDEWLWHYRMGHLNFKDLTLMQKKNYV 362

Query: 456 KG 461
            G
Sbjct: 363 IG 364



 Score = 84.7 bits (208), Expect(2) = 1e-44
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +2

Query: 434 VDRKEYGEGLPVIKAPKELCGECCKSKQARNSFKKTVQGRSTEKLGVVYPDVCRPMEVIT 613
           + +K Y  GLP + AP E+C EC  SKQ R SF K    ++   L +VY DVC PM+V +
Sbjct: 356 MQKKNYVIGLPAMNAPDEICEECVHSKQPRGSFSKYTMSKTKSTLEIVYSDVCGPMQVDS 415

Query: 614 VGGNSYFVSFIDEYTKK 664
           +GGN +FVSF+D++++K
Sbjct: 416 IGGNKHFVSFVDDFSRK 432