BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00029472
         (228 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP78025.1| Retrovirus-related Pol polyprotein from transposo...    89   3e-19
gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposo...    86   7e-19
gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposo...    86   3e-18
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...    86   1e-17
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...    85   2e-17
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...    85   2e-17
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...    85   2e-17
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...    85   2e-17
dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subte...    85   2e-17
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...    84   5e-17
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...    84   5e-17
gb|PNY02744.1| retrovirus-related Pol polyprotein from transposo...    83   7e-17
dbj|GAU48593.1| hypothetical protein TSUD_179750 [Trifolium subt...    83   1e-16
gb|PNY08092.1| histone deacetylase [Trifolium pratense]                82   1e-16
gb|PNX92571.1| histone deacetylase [Trifolium pratense]                82   2e-16
gb|KYP52268.1| Retrovirus-related Pol polyprotein from transposo...    81   4e-16
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...    81   5e-16
dbj|GAU29466.1| hypothetical protein TSUD_65010 [Trifolium subte...    81   5e-16
gb|KYP78233.1| Retrovirus-related Pol polyprotein from transposo...    80   7e-16
gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposo...    80   7e-16

>gb|KYP78025.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 339

 Score = 89.0 bits (219), Expect = 3e-19
 Identities = 43/79 (54%), Positives = 57/79 (72%), Gaps = 5/79 (6%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSV--TSTTTAPSYF 175
           +R+ ECLFLGYS +HKGYKCL +TGR++ISKDV+FNE  FPY  +F     S++T P YF
Sbjct: 140 YRSQECLFLGYSHAHKGYKCLSATGRIYISKDVIFNEQRFPYAHLFPQCHVSSSTLPQYF 199

Query: 176 SLQPLQIP---IQPSAPTT 223
           +LQP   P   +  S+PT+
Sbjct: 200 TLQPNLSPSTSLISSSPTS 218


>gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 243

 Score = 86.3 bits (212), Expect = 7e-19
 Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTST-TTAPS-YF 175
           FR+ EC+FLGYS+SHKGYKCL ++G+++ISKDV+FNET FPY  +F  TST   +PS YF
Sbjct: 86  FRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLFQHTSTLVPSPSQYF 145

Query: 176 SLQPLQIPIQPSAPTTT 226
           +L P   P  P   TTT
Sbjct: 146 TLNPDLSP--PCYHTTT 160


>gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 297

 Score = 85.5 bits (210), Expect = 3e-18
 Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTST-TTAPS-YF 175
           FR+ EC+FLGYS+SHKGYKCL ++G+++ISKDV+FNET FPY  +F  TST   +PS YF
Sbjct: 133 FRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLFQHTSTPVPSPSQYF 192

Query: 176 SLQPLQIPIQPSAPTT 223
           +L P   P  P + TT
Sbjct: 193 TLNPDLSP--PCSHTT 206


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1268

 Score = 85.5 bits (210), Expect = 1e-17
 Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTST-TTAPS-YF 175
           FR+ EC+FLGYS+SHKGYKCL ++G+++ISKDV+FNET FPY  +F  TST   +PS YF
Sbjct: 662 FRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLFQHTSTPVPSPSQYF 721

Query: 176 SLQPLQIPIQPSAPTT 223
           +L P   P  P + TT
Sbjct: 722 TLNPDLSP--PCSHTT 735


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 39/72 (54%), Positives = 50/72 (69%)
 Frame = +2

Query: 5   RTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTTTAPSYFSLQ 184
           R+ EC+FLGYS+SHKGYKCL  TGR+FISKDV+F ET FPYP +F  ++T    S   + 
Sbjct: 284 RSQECVFLGYSTSHKGYKCLAPTGRIFISKDVIFCETRFPYPSLFPASATNPPTSSIPVP 343

Query: 185 PLQIPIQPSAPT 220
            +   +QP  PT
Sbjct: 344 LVITSLQPPMPT 355


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 41/75 (54%), Positives = 53/75 (70%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTTTAPSYFSL 181
           FR+ EC+FLGYS+SHKGYKCL  +GR+FISKDV+F E  FPYP +FS   +T +PS  S+
Sbjct: 394 FRSQECVFLGYSTSHKGYKCLAPSGRVFISKDVIFCENRFPYPTLFS--PSTPSPSSSSI 451

Query: 182 QPLQIPIQPSAPTTT 226
               +   P AP T+
Sbjct: 452 TVPLVVTNPQAPITS 466


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1279

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMF--SVTSTTTAPSYF 175
           FR+ EC+FLGYS+SHKGYKCL S+GR++ISKDV+FNE  FPY  +F  S+T   +   YF
Sbjct: 606 FRSQECVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDLFQPSLTQNVSPCQYF 665

Query: 176 SLQPLQIPIQPSAPTTT 226
           +L P    + P   T+T
Sbjct: 666 NLNP---DLSPPCTTST 679


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1358

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMF--SVTSTTTAPSYF 175
           FR+ EC+FLGYS+SHKGYKCL S+GR++ISKDV+FNE  FPY  +F  S+T   +   YF
Sbjct: 685 FRSQECVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDLFQPSLTQNVSPCQYF 744

Query: 176 SLQPLQIPIQPSAPTTT 226
           +L P    + P   T+T
Sbjct: 745 NLNP---DLSPPCTTST 758


>dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subterraneum]
          Length = 1496

 Score = 84.7 bits (208), Expect = 2e-17
 Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
 Frame = +2

Query: 2    FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTT----TAPS 169
            +R+ EC+FLGYS+ +KGYKCL   G +++SKDVLFNE  FPYP +FS TST+     +P+
Sbjct: 795  YRSKECIFLGYSAMYKGYKCLSPDGHVYVSKDVLFNEHKFPYPLLFSTTSTSKSPILSPT 854

Query: 170  YFSLQPLQIPIQPSAPT 220
              S  PL +P Q   PT
Sbjct: 855  PMSQVPLHLPNQVLNPT 871


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score = 83.6 bits (205), Expect = 5e-17
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMF--SVTSTTTAPSYF 175
           FR+ EC+FLGYS+SHKGYKCL  +GR+FISKDV+F E +FPYP MF  S  S++++P + 
Sbjct: 359 FRSQECVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPSMFPPSTPSSSSSPIFV 418

Query: 176 SLQPLQIPIQPSAPTTT 226
            L    +   P AP T+
Sbjct: 419 PL----VITNPQAPVTS 431


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 682

 Score = 83.6 bits (205), Expect = 5e-17
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMF--SVTSTTTAPSYF 175
           FR+ EC+FLGYS+SHKGYKCL  +GR+FISKDV+F E +FPYP MF  S  S++++P + 
Sbjct: 380 FRSQECVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPSMFPPSTPSSSSSPIFV 439

Query: 176 SLQPLQIPIQPSAPTTT 226
            L    +   P AP T+
Sbjct: 440 PL----VITNPQAPVTS 452


>gb|PNY02744.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 489

 Score = 83.2 bits (204), Expect = 7e-17
 Identities = 37/74 (50%), Positives = 51/74 (68%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTTTAPSYFSL 181
           FR+ EC+FLG S++HKGYKCL  +GR+FISKDVLFNE+ FPY  +FS+++   +P    +
Sbjct: 308 FRSHECIFLGNSTTHKGYKCLSPSGRIFISKDVLFNESRFPYESLFSISNKALSPPIQDV 367

Query: 182 QPLQIPIQPSAPTT 223
               +PI P    T
Sbjct: 368 PISTLPIGPQITNT 381


>dbj|GAU48593.1| hypothetical protein TSUD_179750 [Trifolium subterraneum]
          Length = 1364

 Score = 82.8 bits (203), Expect = 1e-16
 Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTTTAPSYFSL 181
           +R+ EC+FLGYSS +KGYKCL   GR++ISKDVLFNE  FPY ++F  +S   +PS  S 
Sbjct: 672 YRSQECVFLGYSSVYKGYKCLSPEGRIYISKDVLFNEQKFPYSQLFPSSSLGPSPSGTSS 731

Query: 182 Q----PLQIPIQPSAPTTT 226
           Q    PL IP QP  PT T
Sbjct: 732 QSSPIPLIIPSQP-IPTPT 749


>gb|PNY08092.1| histone deacetylase [Trifolium pratense]
          Length = 1339

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 37/58 (63%), Positives = 46/58 (79%), Gaps = 3/58 (5%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMF---SVTSTTTAP 166
           FR+ EC+FLGYS++HKGYKCL  TGR+F+SKDVLFNE  FPYP +F   +  S TT+P
Sbjct: 668 FRSHECIFLGYSNTHKGYKCLSPTGRIFVSKDVLFNEDRFPYPSLFPNSNNNSLTTSP 725


>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score = 82.0 bits (201), Expect = 2e-16
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 13/85 (15%)
 Frame = +2

Query: 2    FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVT--STTTAPS-Y 172
            FR+ ECLFLGYS SHKGY+CL  +GR+++SKDVLFNE+ FPY  +F ++  S+ + PS  
Sbjct: 809  FRSQECLFLGYSPSHKGYRCLSPSGRLYVSKDVLFNESRFPYKELFPISSGSSHSPPSKS 868

Query: 173  FSLQPLQI----------PIQPSAP 217
            F L PL            P+ P+AP
Sbjct: 869  FKLPPLPTFPSITTDITSPLPPTAP 893


>gb|KYP52268.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 828

 Score = 81.3 bits (199), Expect = 4e-16
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTTTAPSYFSL 181
           FR+ EC+FLGYS+SHKGYKCL S+GR FISKDV+F E+ FPYP +F  ++ ++ PS   +
Sbjct: 682 FRSQECVFLGYSTSHKGYKCLASSGRTFISKDVIFCESCFPYPSLFPPSTPSSPPSSIFV 741

Query: 182 QPLQIPIQPSAPTTT 226
            PL I    ++ T+T
Sbjct: 742 -PLVITNPQASVTST 755


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 785

 Score = 80.9 bits (198), Expect = 5e-16
 Identities = 39/72 (54%), Positives = 47/72 (65%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTTTAPSYFSL 181
           FR+ EC+FLGYS+SHKGYKCL  TGR+FISKDV+F ET FPYP +F   +T         
Sbjct: 647 FRSQECVFLGYSTSHKGYKCLAPTGRIFISKDVVFCETRFPYPSLFPAPATN-------- 698

Query: 182 QPLQIPIQPSAP 217
                P+ PS P
Sbjct: 699 -----PLTPSIP 705


>dbj|GAU29466.1| hypothetical protein TSUD_65010 [Trifolium subterraneum]
          Length = 1362

 Score = 80.9 bits (198), Expect = 5e-16
 Identities = 42/82 (51%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
 Frame = +2

Query: 2    FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTTTAPSY--- 172
            F + EC+FLGYS  HKGYKCLDSTGR+FISKDV+FNE+ FPY  +F    T +  S+   
Sbjct: 777  FHSKECIFLGYSPVHKGYKCLDSTGRVFISKDVVFNESRFPYNDLFPSAPTPSVISHDDP 836

Query: 173  ----FSLQPLQIPIQPSAPTTT 226
                F   P  I   PS   TT
Sbjct: 837  TLSIFLSLPTHIHDNPSPSPTT 858


>gb|KYP78233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 540

 Score = 80.5 bits (197), Expect = 7e-16
 Identities = 35/66 (53%), Positives = 50/66 (75%)
 Frame = +2

Query: 5   RTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMFSVTSTTTAPSYFSLQ 184
           R+ ECLFLGYS+SHKGYKCL + GR++ISKDV+FNE  FPY  +F     T++P++ S  
Sbjct: 134 RSQECLFLGYSTSHKGYKCLAADGRLYISKDVIFNEAKFPYKTLF-----TSSPTHSSQN 188

Query: 185 PLQIPI 202
            +++P+
Sbjct: 189 TIEVPL 194


>gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 623

 Score = 80.5 bits (197), Expect = 7e-16
 Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   FRTAECLFLGYSSSHKGYKCLDSTGRMFISKDVLFNETNFPYPRMF-SVTSTTTAPSYFS 178
           FR+ EC+FLGYSSSHKGYKCLD+ G +FISKDV+FNE  FPY  +  S TS + + + F 
Sbjct: 347 FRSTECVFLGYSSSHKGYKCLDTNGLLFISKDVIFNEQRFPYQHLIPSTTSVSNSSTNFP 406

Query: 179 L 181
           L
Sbjct: 407 L 407