BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00029140
         (468 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX85315.1| retrovirus-related Pol polyprotein from transposo...    55   3e-07
gb|PNX81829.1| retrovirus-related Pol polyprotein from transposo...    52   3e-06
gb|PNX64264.1| retrovirus-related Pol polyprotein from transposo...    53   3e-06
gb|PNX59026.1| hypothetical protein L195_g051210 [Trifolium prat...    55   5e-06
gb|KHN26788.1| Retrovirus-related Pol polyprotein from transposo...    55   9e-06

>gb|PNX85315.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
          [Trifolium pratense]
          Length = 63

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = -2

Query: 89 ERETSFLQPSVPKLDGYYEHWSMLMENLL 3
          E  ++FLQPSVPK +GYYEHWSMLMENL+
Sbjct: 2  EESSNFLQPSVPKFEGYYEHWSMLMENLI 30


>gb|PNX81829.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
          [Trifolium pratense]
          Length = 65

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -2

Query: 86 RETSFLQPSVPKLDGYYEHWSMLMENLL 3
          + ++F QPS+PK DGYYEHW+MLMENLL
Sbjct: 3  KSSNFAQPSIPKFDGYYEHWAMLMENLL 30


>gb|PNX64264.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
          partial [Trifolium pratense]
          Length = 87

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 20/27 (74%), Positives = 26/27 (96%)
 Frame = -2

Query: 83 ETSFLQPSVPKLDGYYEHWSMLMENLL 3
          E+SF+QP++PK DG+Y+HWSMLMENLL
Sbjct: 3  ESSFMQPAIPKFDGHYDHWSMLMENLL 29


>gb|PNX59026.1| hypothetical protein L195_g051210 [Trifolium pratense]
          Length = 206

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = -2

Query: 89 ERETSFLQPSVPKLDGYYEHWSMLMENLL 3
          E  ++FLQPSVPK DGY+EHWSMLMENL+
Sbjct: 2  EESSNFLQPSVPKFDGYFEHWSMLMENLI 30


>gb|KHN26788.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
          partial [Glycine soja]
          Length = 341

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -2

Query: 83 ETSFLQPSVPKLDGYYEHWSMLMENLL 3
          E+SFLQPS+PK DG+Y+HWSMLMENLL
Sbjct: 4  ESSFLQPSIPKFDGHYDHWSMLMENLL 30