BLASTX nr result

ID: Astragalus24_contig00029116 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00029116
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFH64614.1| expressed protein [Arabidopsis lyrata subsp. lyrata]    68   4e-12

>gb|EFH64614.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
          Length = 90

 Score = 67.8 bits (164), Expect = 4e-12
 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
 Frame = +3

Query: 123 MKARCFLFPYNWSS*ALSLY*FNPTEFICS-EPT-------IQTKIWAGSNTNEKFLEFA 278
           M+AR F F +N  +     + F P+ +I S +P        I+ +++      +   EF+
Sbjct: 1   MEARFFFFSWNQEN-----WVFYPSIYIYSLDPNWNSFFFDIKIRLYRSGKQKKMLSEFS 55

Query: 279 IDTTCCFFHSFLSGSVVVLQTLPMVWMNQLVH 374
           +DTTC FFHSFLSGSVVVLQTLP +W N  +H
Sbjct: 56  LDTTCYFFHSFLSGSVVVLQTLPRIWTNPFLH 87


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