BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00029113
         (442 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX96089.1| copia-type polyprotein, partial [Trifolium pratense]   178   5e-49
dbj|GAU39634.1| hypothetical protein TSUD_397220 [Trifolium subt...   166   6e-47
gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen...   172   9e-47
gb|PNX65055.1| retrotransposon-related protein, partial [Trifoli...   160   4e-46
gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinen...   168   6e-46
dbj|GAU36022.1| hypothetical protein TSUD_211600 [Trifolium subt...   169   8e-46
dbj|GAU31928.1| hypothetical protein TSUD_271130, partial [Trifo...   168   9e-46
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   168   2e-45
dbj|GAU29902.1| hypothetical protein TSUD_379930 [Trifolium subt...   167   3e-45
dbj|GAU38535.1| hypothetical protein TSUD_320070 [Trifolium subt...   164   7e-45
dbj|GAU44523.1| hypothetical protein TSUD_82300 [Trifolium subte...   166   7e-45
dbj|GAU40904.1| hypothetical protein TSUD_297090 [Trifolium subt...   162   1e-44
gb|PNX99782.1| copia-type polyprotein [Trifolium pratense]            165   2e-44
dbj|GAU17897.1| hypothetical protein TSUD_330230 [Trifolium subt...   165   2e-44
dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subt...   165   2e-44
dbj|GAU44758.1| hypothetical protein TSUD_246510 [Trifolium subt...   164   3e-44
gb|PNX95763.1| retrotransposon-related protein, partial [Trifoli...   164   3e-44
gb|PRQ33299.1| putative RNA-directed DNA polymerase [Rosa chinen...   164   3e-44
gb|KYP50277.1| Retrovirus-related Pol polyprotein from transposo...   159   6e-44
gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposo...   160   8e-44

>gb|PNX96089.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 1062

 Score =  178 bits (452), Expect = 5e-49
 Identities = 84/147 (57%), Positives = 105/147 (71%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IECYHC KLGH++ +CP W++KAN            MA++EK    D++ WFLDSGC NH
Sbjct: 271 IECYHCHKLGHFQSDCPAWDEKANYAEFDEGEEMLLMAHSEK-GSYDKKVWFLDSGCRNH 329

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           MCG K+WF  L+E  R+ V+LG+  R+   GKG+VKL   GIT +IT+VYYIP L +NLL
Sbjct: 330 MCGTKDWFFNLDEQFRISVKLGDNSRMMVVGKGNVKLRIGGITQVITNVYYIPELKNNLL 389

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQLQEK GL VVFK +MC+VYH ER
Sbjct: 390 SIGQLQEK-GLTVVFKEDMCRVYHQER 415


>dbj|GAU39634.1| hypothetical protein TSUD_397220 [Trifolium subterraneum]
          Length = 417

 Score =  166 bits (420), Expect = 6e-47
 Identities = 75/149 (50%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWE-DKANXXXXXXXXXXXXMAYTEKRD-KTDQEQWFLDSGCS 174
           +EC+ C KLGHY+ ECPNWE + AN            M  T+    K + E WFLDSGCS
Sbjct: 150 VECFKCHKLGHYQSECPNWEGNDANYAEFNQYEEVLLMTKTDSNQHKYENETWFLDSGCS 209

Query: 175 NHMCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSN 354
           NHM GHK+W  E +E+   YV+LG+  R+  +GKG++KL  +G+ H+I++VY++PGL +N
Sbjct: 210 NHMVGHKDWMFEFDETYSDYVKLGDDSRMAVKGKGNIKLCINGVVHVISNVYFVPGLKTN 269

Query: 355 LLSIGQLQEKVGLAVVFKGNMCKVYHDER 441
           LLSIGQLQ+K  + V+FK +MCKVYHD++
Sbjct: 270 LLSIGQLQQK-QITVIFKNDMCKVYHDDK 297


>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1302

 Score =  172 bits (435), Expect = 9e-47
 Identities = 75/147 (51%), Positives = 103/147 (70%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           +ECY C KLGH+++ECP WE  AN            MAY E  +   +E WFLDSGCSNH
Sbjct: 247 VECYKCHKLGHFQYECPEWEKGANYAELDEKEEMLLMAYVELNNSKMEEVWFLDSGCSNH 306

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G+K+WF++LNE  R  V+LGN  ++   GKG+V+L+++G+T + TDVYYIP L +NLL
Sbjct: 307 MSGNKKWFIDLNEQFRQSVKLGNNSKMAVMGKGNVRLQANGVTQVFTDVYYIPELKNNLL 366

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQLQEK G+A++ +  MC++YH  +
Sbjct: 367 SIGQLQEK-GVAILIQNGMCQIYHPRK 392


>gb|PNX65055.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 281

 Score =  160 bits (405), Expect = 4e-46
 Identities = 74/146 (50%), Positives = 98/146 (67%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C KLGHY+  CP+W D  N            MA T+K  +  +E W+LDSGC+NH
Sbjct: 22  IECFKCHKLGHYQSSCPDWGDNVNYTEFYEEKETLLMARTDKDHEIREEIWYLDSGCNNH 81

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G K+W  + + S +  V+LGN  ++   GKG+VKL  +G  H+IT+VYY+PGL++NLL
Sbjct: 82  MIGQKDWLYDFDSSFKDSVKLGNDTKMSVMGKGNVKLFINGKIHVITNVYYLPGLTTNLL 141

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDE 438
           S+GQLQEK  + VVFK NMCK YHDE
Sbjct: 142 SVGQLQEK-KVTVVFKDNMCKGYHDE 166


>gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 719

 Score =  168 bits (426), Expect = 6e-46
 Identities = 71/147 (48%), Positives = 104/147 (70%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           +EC+ C KLGH+++ECP+WE + N            MA+ E+ D   ++ WFLDSGCSNH
Sbjct: 259 VECFKCHKLGHFQYECPSWEKRVNYAELEEEDELLLMAHVERNDSKPEDVWFLDSGCSNH 318

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           MC +K+WF  ++E  R  V+LGN  R+   GKGS++L+ DG+T +I+DVY++P L +NLL
Sbjct: 319 MCCNKDWFTNIDEEFRHSVKLGNNARMSVMGKGSIRLKVDGLTQVISDVYFVPELRNNLL 378

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQLQEK GLA++ +  +CK+YH ++
Sbjct: 379 SIGQLQEK-GLAILIQHGVCKIYHSKK 404


>dbj|GAU36022.1| hypothetical protein TSUD_211600 [Trifolium subterraneum]
          Length = 1423

 Score =  169 bits (428), Expect = 8e-46
 Identities = 79/147 (53%), Positives = 102/147 (69%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C KLGHYR ECP+WE  AN            MA T   D++  E WFLDSGCSNH
Sbjct: 246 IECFKCHKLGHYRKECPDWEGNANYAEFLDEEETLLMARTNT-DESKHETWFLDSGCSNH 304

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G+K+W  EL+ES R  V+LG+  ++   GKG+VKL  DG  H+IT V+YIPGL SNLL
Sbjct: 305 MVGNKDWLYELDESYRDTVKLGDDSKMNVMGKGNVKLSIDGKIHVITGVFYIPGLKSNLL 364

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQ+Q+K  + +VFK ++CK+YHD++
Sbjct: 365 SIGQIQQK-NVTIVFKNDICKIYHDDK 390


>dbj|GAU31928.1| hypothetical protein TSUD_271130, partial [Trifolium subterraneum]
          Length = 747

 Score =  168 bits (425), Expect = 9e-46
 Identities = 78/147 (53%), Positives = 102/147 (69%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C KLGHYR+ECP+WE  AN            MA T   D++  E WFLDSGCSNH
Sbjct: 246 IECFKCHKLGHYRNECPDWEGNANYAEFLDEEETLLMARTNA-DESKHETWFLDSGCSNH 304

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G+K+W  EL+ES R   +LG+  ++   GKG+VKL  DG  H+IT V+YIPGL SNLL
Sbjct: 305 MVGNKDWLYELDESYRDTFKLGDDSKMNVMGKGNVKLSIDGRIHVITGVFYIPGLKSNLL 364

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQ+Q+K  + +VFK ++CK+YHD++
Sbjct: 365 SIGQIQQK-NVTIVFKNDICKIYHDDK 390


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  168 bits (425), Expect = 2e-45
 Identities = 74/147 (50%), Positives = 100/147 (68%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           +ECY C KLGH++HE P WE  AN            MAY E  +   +E WFLDSGCSNH
Sbjct: 249 VECYKCHKLGHFQHEFPEWEKGANYAEHDENEEMLLMAYVELNNSKMEEVWFLDSGCSNH 308

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G+K+WF +LNE  R  V+LGN  ++   GKG+V+L+++G+T + TDVYYIP L +NLL
Sbjct: 309 MSGNKQWFTDLNEQFRQSVKLGNNSKMAVMGKGNVRLQANGVTQVFTDVYYIPELKNNLL 368

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQLQEK G+ ++ +  MC++YH  +
Sbjct: 369 SIGQLQEK-GVTILIRNGMCQIYHPRK 394


>dbj|GAU29902.1| hypothetical protein TSUD_379930 [Trifolium subterraneum]
          Length = 1277

 Score =  167 bits (424), Expect = 3e-45
 Identities = 78/147 (53%), Positives = 101/147 (68%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C KLGHYR+ECP WE  AN            MA T   D++  E WFLDSGCSNH
Sbjct: 246 IECFKCHKLGHYRNECPEWEGNANYVEFLDEEETLLMARTNA-DESKHETWFLDSGCSNH 304

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G+K+W  EL+ES R  V+LG+  ++   GKG+VKL  DG  H+IT V+YIPGL SNLL
Sbjct: 305 MVGNKDWLYELDESYRDTVKLGDDSKMNVMGKGNVKLSIDGRIHVITGVFYIPGLKSNLL 364

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
            IGQ+Q+K  + +VFK ++CK+YHD++
Sbjct: 365 RIGQIQQK-NVTIVFKNDICKIYHDDK 390


>dbj|GAU38535.1| hypothetical protein TSUD_320070 [Trifolium subterraneum]
          Length = 575

 Score =  164 bits (414), Expect = 7e-45
 Identities = 75/148 (50%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWE-DKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSN 177
           +EC+ C KLGHY++ECPNWE + AN            MA T+       E WFLDSGCSN
Sbjct: 150 VECFKCHKLGHYQNECPNWEGNDANYVEFNQHKKVLLMAKTKHDPNNKHEIWFLDSGCSN 209

Query: 178 HMCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNL 357
           HM GHK+W     E+   +V+LG+G  +   GKG+VKL  +G+ H+I++VY++PGL +NL
Sbjct: 210 HMIGHKDWLFNFGETYSDFVKLGDGSSMAVRGKGNVKLCINGVVHVISNVYFVPGLKTNL 269

Query: 358 LSIGQLQEKVGLAVVFKGNMCKVYHDER 441
           LSIGQLQ+K  + VVFK +MC VYHD+R
Sbjct: 270 LSIGQLQQK-QITVVFKNDMCMVYHDDR 296


>dbj|GAU44523.1| hypothetical protein TSUD_82300 [Trifolium subterraneum]
          Length = 832

 Score =  166 bits (420), Expect = 7e-45
 Identities = 73/147 (49%), Positives = 100/147 (68%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IECY C KLGHYR+EC  WE   N            MAY++   +  +E W++DSGCSNH
Sbjct: 186 IECYKCHKLGHYRNECSEWEGNVNYAEYQHEEETLLMAYSDSNTEHKEEVWYIDSGCSNH 245

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G KEW  + +ES R  V+LGN  ++   GKG+VKL  +G  H+I+DVYY+PGL +NLL
Sbjct: 246 MVGTKEWLFDFDESFRESVKLGNDSKMAVMGKGNVKLSIEGKLHVISDVYYLPGLGNNLL 305

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           S+GQLQ+K GL V+F+ +MC+ +H+E+
Sbjct: 306 SVGQLQQK-GLTVIFRNDMCQWFHEEK 331


>dbj|GAU40904.1| hypothetical protein TSUD_297090 [Trifolium subterraneum]
          Length = 524

 Score =  162 bits (410), Expect = 1e-44
 Identities = 75/147 (51%), Positives = 99/147 (67%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C KLGHYR ECP WE+ AN            MA T   D++    WFLDSGCSNH
Sbjct: 246 IECFKCYKLGHYRSECPEWEENANFAEFLDEEETLLMASTNT-DESKNGTWFLDSGCSNH 304

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G+K+W  E +ES R  ++LG+  ++   GKG+VKL   G  H+IT V+YIPGL SNLL
Sbjct: 305 MVGNKDWLYEFDESYRDSIKLGDDSKMNVMGKGNVKLSISGKIHVITGVFYIPGLKSNLL 364

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQ+Q+K  + ++FK ++CK+YHDE+
Sbjct: 365 SIGQIQQK-NVTIMFKNDICKIYHDEK 390


>gb|PNX99782.1| copia-type polyprotein [Trifolium pratense]
          Length = 912

 Score =  165 bits (417), Expect = 2e-44
 Identities = 74/147 (50%), Positives = 103/147 (70%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C KLGHYR+ECP+WE  AN            MAY+  ++   +  W++DSGCSNH
Sbjct: 243 IECFKCHKLGHYRNECPDWE--ANYAEHREEEEMLLMAYSYTKEDFIKGMWYIDSGCSNH 300

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G KEWF + ++  R  V+LGN  ++   G+G+VKL  DG  H+IT+VYY+PGLS+NLL
Sbjct: 301 MTGTKEWFFDFDDKFRESVKLGNDSKMTVMGRGNVKLNMDGKIHVITNVYYLPGLSNNLL 360

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           S+GQLQ++ GL  VFK NMC+++H+E+
Sbjct: 361 SVGQLQQR-GLTTVFKNNMCQLFHEEK 386


>dbj|GAU17897.1| hypothetical protein TSUD_330230 [Trifolium subterraneum]
          Length = 1313

 Score =  165 bits (417), Expect = 2e-44
 Identities = 75/147 (51%), Positives = 98/147 (66%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IECY C +LGHY++ECP WE KAN            M+Y EK     +E WFLDSGCSNH
Sbjct: 249 IECYKCHQLGHYQNECPEWEKKANYAELEEEEELLLMSYLEKHQTDREEVWFLDSGCSNH 308

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G K+WF +L E     V+LGN  ++   GKGSVKL+ +G   +I +VYY+P L +NLL
Sbjct: 309 MTGCKDWFFDLEEGFNRSVKLGNDTKMSVVGKGSVKLQVNGAIQVIPEVYYVPELKNNLL 368

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           S+GQLQE+ GLA++ +G  CKVYH ++
Sbjct: 369 SLGQLQER-GLAILIRGGTCKVYHPKK 394


>dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subterraneum]
          Length = 1608

 Score =  165 bits (417), Expect = 2e-44
 Identities = 72/147 (48%), Positives = 103/147 (70%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C KLGH+++ECP+WE+KAN            MAY E R  + +E WFLDSGCSNH
Sbjct: 249 IECFKCHKLGHFQYECPDWENKANYAELEEEEELLLMAYEELRQPSQEEAWFLDSGCSNH 308

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G+K+WF E+ E     V+LGN   +    KGS++++ +G+T +I+DVY++P L +NLL
Sbjct: 309 MTGNKKWFSEMEEGFCRTVKLGNDTTMAVVAKGSIRVQINGVTQVISDVYFVPELKNNLL 368

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           S+GQLQEK GLA++ + N CKV+H ++
Sbjct: 369 SLGQLQEK-GLAILIQNNTCKVFHPDK 394


>dbj|GAU44758.1| hypothetical protein TSUD_246510 [Trifolium subterraneum]
          Length = 1301

 Score =  164 bits (416), Expect = 3e-44
 Identities = 76/149 (51%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWE-DKANXXXXXXXXXXXXMAYTEKRD-KTDQEQWFLDSGCS 174
           +EC+ C KLGHY+ ECPNWE + AN            MA T+    K + E WFLDSGCS
Sbjct: 244 VECFKCHKLGHYQSECPNWEGNDANYAEFNQYEEVLLMAKTDSNQHKYENETWFLDSGCS 303

Query: 175 NHMCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSN 354
           NHM GHK+W  E +E+    V+LG+  R+  +GKG+VKL  +G+ H+I++VY++PGL +N
Sbjct: 304 NHMVGHKDWMFEFDETYSDSVKLGDDSRMAVKGKGNVKLCINGVVHVISNVYFVPGLKTN 363

Query: 355 LLSIGQLQEKVGLAVVFKGNMCKVYHDER 441
           LLSIGQLQ+K  + V+FK +MCKVYHD++
Sbjct: 364 LLSIGQLQQK-QITVIFKNDMCKVYHDDK 391


>gb|PNX95763.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1327

 Score =  164 bits (416), Expect = 3e-44
 Identities = 78/147 (53%), Positives = 100/147 (68%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C K GH+++ECP+WE +AN            MAY E++ +T +E WFLDSGCSNH
Sbjct: 248 IECFKCHKKGHFQYECPDWEREANFAELEHEDELLLMAYVEEKKETREEIWFLDSGCSNH 307

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           M G+KEWF +LNE  +  V+LGN  R+   G GSV+L  +GI  +IT+VYYIP L +NLL
Sbjct: 308 MSGNKEWFTDLNEDFKQTVKLGNDSRIAVTGIGSVRLWVNGIVQVITNVYYIPELKNNLL 367

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQLQEK GL V+ +   CKV H  R
Sbjct: 368 SIGQLQEK-GLTVLIQNGTCKVLHPSR 393


>gb|PRQ33299.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1363

 Score =  164 bits (416), Expect = 3e-44
 Identities = 75/147 (51%), Positives = 101/147 (68%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           +ECY C KLGH+++ECP W+ +AN            MAY E    + +E WFLDSGCSNH
Sbjct: 305 VECYRCHKLGHFQYECPTWDKQANYAELDEQEEMLLMAYVENIGASREEIWFLDSGCSNH 364

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           MCG+K  F ELN+S +  VRLGN  R++  GKG+VKLE +G+  +I DV+Y+P L +NLL
Sbjct: 365 MCGNKVLFAELNKSFQHTVRLGNNTRMKVSGKGNVKLEVNGVNCVIGDVFYVPELKNNLL 424

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQLQE+ GLA++     CK+YH ++
Sbjct: 425 SIGQLQER-GLAILIHYGKCKIYHPQK 450


>gb|KYP50277.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 442

 Score =  159 bits (401), Expect = 6e-44
 Identities = 71/147 (48%), Positives = 99/147 (67%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           IEC+ C KL HY++ECP+W+ +A+            MA  +         WFLDSGCSNH
Sbjct: 241 IECFKCHKLEHYKNECPDWDKEAHYAAFNEEEELLLMADEDLHGVQTTNAWFLDSGCSNH 300

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           MCG++ WF E++++ + +V+LGN  R+   GKGSV+L   G+THIITDV+ +P L +NLL
Sbjct: 301 MCGNRAWFKEVDDTFKQHVKLGNNTRMEVTGKGSVRLNIKGVTHIITDVFLVPELKNNLL 360

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQLQEK GL V+F+   CK+YH ++
Sbjct: 361 SIGQLQEK-GLTVMFQSGTCKLYHPDK 386


>gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 560

 Score =  160 bits (406), Expect = 8e-44
 Identities = 69/147 (46%), Positives = 99/147 (67%)
 Frame = +1

Query: 1   IECYHCRKLGHYRHECPNWEDKANXXXXXXXXXXXXMAYTEKRDKTDQEQWFLDSGCSNH 180
           +ECY C +LGH+++ECP W  +AN            M+Y +  +   ++ WFLDSGCSNH
Sbjct: 218 VECYKCHQLGHFQNECPTWNKEANYAEHEEEEEMLLMSYMDVNETQREDAWFLDSGCSNH 277

Query: 181 MCGHKEWFLELNESVRVYVRLGNGMRLRTEGKGSVKLESDGITHIITDVYYIPGLSSNLL 360
           MCG K  F  LNE  R  V+LGN  ++   GKG+V+L+ +G TH++T+V+Y+P L +NLL
Sbjct: 278 MCGDKALFYNLNEDFRQIVKLGNNSKMSVLGKGNVRLKVNGFTHVVTEVFYVPELKNNLL 337

Query: 361 SIGQLQEKVGLAVVFKGNMCKVYHDER 441
           SIGQLQEK GL+++ +   CK+YH E+
Sbjct: 338 SIGQLQEK-GLSILIQNGSCKIYHPEK 363