BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00027958
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX84261.1| ribonuclease H, partial [Trifolium pratense]           211   1e-62
dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subt...   213   5e-61
gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]           210   5e-60
gb|PNY07262.1| ribonuclease H [Trifolium pratense]                    201   2e-59
dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subte...   204   5e-59
dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subt...   201   7e-57
dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subt...   194   2e-54
gb|PNX93586.1| ribonuclease H, partial [Trifolium pratense]           187   8e-52
gb|PNX59423.1| ribonuclease H, partial [Trifolium pratense]           162   2e-46
gb|PNX92520.1| ribonuclease H, partial [Trifolium pratense]           171   3e-46
gb|PNX92765.1| ribonuclease H [Trifolium pratense]                    164   7e-44
gb|PNX92714.1| ribonuclease H [Trifolium pratense]                    163   2e-43
dbj|GAU37589.1| hypothetical protein TSUD_365100 [Trifolium subt...   161   2e-43
dbj|GAU50504.1| hypothetical protein TSUD_409790 [Trifolium subt...   159   3e-42
dbj|GAU35137.1| hypothetical protein TSUD_394630 [Trifolium subt...   156   7e-42
dbj|GAU41508.1| hypothetical protein TSUD_302460 [Trifolium subt...   158   1e-41
gb|PNY14401.1| ribonuclease H [Trifolium pratense]                    157   2e-41
gb|PNX93226.1| ribonuclease H, partial [Trifolium pratense]           155   7e-41
gb|PNX71724.1| ribonuclease H, partial [Trifolium pratense]           152   4e-40
gb|PNY05589.1| ribonuclease H [Trifolium pratense]                    153   5e-40

>gb|PNX84261.1| ribonuclease H, partial [Trifolium pratense]
          Length = 574

 Score =  211 bits (537), Expect = 1e-62
 Identities = 107/165 (64%), Positives = 129/165 (78%)
 Frame = -2

Query: 495 LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
           ++ V++G+WKPVRLSRNGPPLSH+FFADDVLLF+KA  SQ   IA +LTRF++ SGLK+N
Sbjct: 334 IREVEEGHWKPVRLSRNGPPLSHLFFADDVLLFAKATKSQALNIASTLTRFANYSGLKVN 393

Query: 315 VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
           V+             K+  IV++TGI RT SLEKYLGF M+H RL R+DYEFLEEKV+QR
Sbjct: 394 VSKSKVFFSSTTKRGKITSIVNSTGINRTYSLEKYLGFPMLHERLHRRDYEFLEEKVSQR 453

Query: 135 LLGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            L SWK+ LLNKAGR+TLVK VLNSIP YYMQ+  LPQSTC+ ID
Sbjct: 454 -LASWKHNLLNKAGRMTLVKSVLNSIPNYYMQVAWLPQSTCDSID 497


>dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subterraneum]
          Length = 1375

 Score =  213 bits (543), Expect = 5e-61
 Identities = 108/165 (65%), Positives = 130/165 (78%)
 Frame = -2

Query: 495  LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
            +K+VDDGYWKPVRLSRNGPPLSH+FF DDVLLF+KA  SQ   IA  LTRF+S SGLK+N
Sbjct: 795  IKAVDDGYWKPVRLSRNGPPLSHLFFVDDVLLFAKATNSQALNIATILTRFASCSGLKVN 854

Query: 315  VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
            V+             K++ IV++TGI RT SLEKYLGF M+HGRL R+D+EFLEEK++QR
Sbjct: 855  VSKSKVFFSPSTPRGKINSIVTHTGINRTHSLEKYLGFPMMHGRLRRRDFEFLEEKISQR 914

Query: 135  LLGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
             L SW++ LLNKAGR+TLVK VLNSIP YYMQ+  LPQ+TC+ ID
Sbjct: 915  -LASWQHNLLNKAGRMTLVKSVLNSIPNYYMQVAWLPQTTCDSID 958


>gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1142

 Score =  210 bits (535), Expect = 5e-60
 Identities = 107/165 (64%), Positives = 126/165 (76%)
 Frame = -2

Query: 495  LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
            +K+V+DG WKPVRLSRNGPPLSH+FFADDVLLF+KA  SQ   +A +LT F+S SGLK+N
Sbjct: 607  IKAVNDGLWKPVRLSRNGPPLSHLFFADDVLLFAKATKSQALNVATTLTHFASFSGLKVN 666

Query: 315  VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
                           KM  IV++TGI RT SLEKYLGF M+HGRL+RKDYEFLEEK++ R
Sbjct: 667  ATKSKVFFSSSTKRGKMTSIVTSTGISRTHSLEKYLGFPMMHGRLQRKDYEFLEEKISHR 726

Query: 135  LLGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
             L SW++ LLNKAGR+TLVK VLNSIP YYMQ+  LPQSTC  ID
Sbjct: 727  -LASWQHNLLNKAGRMTLVKSVLNSIPNYYMQVAWLPQSTCETID 770


>gb|PNY07262.1| ribonuclease H [Trifolium pratense]
          Length = 502

 Score =  201 bits (512), Expect = 2e-59
 Identities = 102/165 (61%), Positives = 126/165 (76%)
 Frame = -2

Query: 495 LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
           ++++DDG WK VRLSRNGPPLSH+FFADDVLLF+KA  SQ   IA  L  F+  SGL++N
Sbjct: 115 VRNIDDGLWKSVRLSRNGPPLSHLFFADDVLLFAKATKSQALNIASRLKSFADYSGLQVN 174

Query: 315 VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
           V+             K+  IV++TGI RTLSLEKYLGF M+HGRL+R+D+EFLEEK++ +
Sbjct: 175 VSKSKVFFSSNIRRGKISSIVTSTGINRTLSLEKYLGFPMMHGRLQRRDFEFLEEKIS-K 233

Query: 135 LLGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            L SW++ LLNKAGR+T VK VLNSIP YYMQI  LPQSTC+FID
Sbjct: 234 SLASWQHNLLNKAGRMTSVKSVLNSIPKYYMQIAWLPQSTCDFID 278


>dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score =  204 bits (520), Expect = 5e-59
 Identities = 102/165 (61%), Positives = 129/165 (78%)
 Frame = -2

Query: 495 LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
           LK++DDG W PVRLSRNGPPLSH+FFADDVLLF+KA  SQ  +IA +L RF+  SGLK+N
Sbjct: 50  LKNIDDGLWNPVRLSRNGPPLSHLFFADDVLLFAKATKSQARIIASTLKRFADYSGLKVN 109

Query: 315 VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
           ++             K+  IV++TGI RTLSLEKYLGF M+HGRL+R+D+ FLEEK++++
Sbjct: 110 ISKSKVFFSSTTRRGKISSIVASTGINRTLSLEKYLGFPMMHGRLQRRDFAFLEEKISKK 169

Query: 135 LLGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            L SW+++LLNKAGR+TLVK VLNSIP YYMQI  LPQ+T + ID
Sbjct: 170 -LASWQHRLLNKAGRLTLVKSVLNSIPNYYMQITWLPQTTSDSID 213


>dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subterraneum]
          Length = 1200

 Score =  201 bits (512), Expect = 7e-57
 Identities = 102/165 (61%), Positives = 127/165 (76%)
 Frame = -2

Query: 495  LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
            L +++DG+WKP+RLSRNGPPLSH+FFADDVLLF+KA  SQ   IA +L RF+  SGLK+N
Sbjct: 580  LNNMEDGHWKPMRLSRNGPPLSHLFFADDVLLFAKATRSQTLNIASTLKRFADYSGLKVN 639

Query: 315  VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
                           K+  IV++TGI RTLSLEKYLG  M+HGRL+R+D+EFLEEK+++R
Sbjct: 640  TNKSKVFFSSTTRNGKISSIVASTGINRTLSLEKYLGIPMMHGRLKRRDFEFLEEKISKR 699

Query: 135  LLGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
             L SW++ LLNKAGR+TLVK VLNSI  YYMQI  LPQ+TC+FID
Sbjct: 700  -LDSWQHNLLNKAGRMTLVKSVLNSILNYYMQIAWLPQTTCDFID 743


>dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subterraneum]
          Length = 1049

 Score =  194 bits (493), Expect = 2e-54
 Identities = 100/155 (64%), Positives = 120/155 (77%)
 Frame = -2

Query: 465 PVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINVAXXXXXXXX 286
           PVRLSRNGPPLSH+FFADDVLLF+KA  SQ   IA +L  F+  SGL++NV+        
Sbjct: 522 PVRLSRNGPPLSHLFFADDVLLFAKATKSQALNIASTLKSFADYSGLQVNVSKSKVFFSS 581

Query: 285 XXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRLLGSWKNKLL 106
                K+  IV++TGI RTLSLEKYLGF M+HGRL+R+D+EFLEEK++ + L SWK+ LL
Sbjct: 582 NIRRGKISSIVTSTGINRTLSLEKYLGFPMMHGRLQRRDFEFLEEKIS-KSLASWKHNLL 640

Query: 105 NKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
           NKAGR+TLVK VLNSIP YYMQI  LPQSTC+FID
Sbjct: 641 NKAGRMTLVKSVLNSIPNYYMQIAWLPQSTCDFID 675


>gb|PNX93586.1| ribonuclease H, partial [Trifolium pratense]
          Length = 953

 Score =  187 bits (474), Expect = 8e-52
 Identities = 95/165 (57%), Positives = 121/165 (73%)
 Frame = -2

Query: 495  LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
            L++VD+  WKPV +SRNGP LSH+FFADDVLLFSKA  SQ  +I   LT+F++LSGL++N
Sbjct: 687  LQAVDNNAWKPVSISRNGPGLSHLFFADDVLLFSKATVSQATVIEGILTKFANLSGLRVN 746

Query: 315  VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
            +              K+D IVS TGI+ T SLEKYLGF +IHGRL ++DY+F  +K+  R
Sbjct: 747  IQKSRAFFSATTRQNKIDSIVSITGIQNTNSLEKYLGFPIIHGRLCKRDYDFFIDKIQHR 806

Query: 135  LLGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
             L SWKNKLLNKAGR+ LV+ VL SIPTYYMQ+  LP S C+++D
Sbjct: 807  -LASWKNKLLNKAGRLALVQSVLTSIPTYYMQLNWLPSSICDYMD 850


>gb|PNX59423.1| ribonuclease H, partial [Trifolium pratense]
          Length = 277

 Score =  162 bits (409), Expect = 2e-46
 Identities = 85/163 (52%), Positives = 108/163 (66%)
 Frame = -2

Query: 489 SVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINVA 310
           +V  G W P+ +S NGP LSH+FFADDVLLF+KA  SQ+  I D   RFS  SGLKIN++
Sbjct: 98  AVQHGAWTPINISDNGPRLSHLFFADDVLLFTKAKNSQLRFINDLFARFSQASGLKINLS 157

Query: 309 XXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRLL 130
                        K++ + S +GIR T SL+KYLGF ++ GR +R D+ F+ +K+  R L
Sbjct: 158 KSRAFYSGGIPQAKINKLTSISGIRSTSSLDKYLGFPILKGRAKRSDFHFIIDKMQSR-L 216

Query: 129 GSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            SWKN+LLNK GR+ L   VL SIPTYYMQI  LPQS C+ ID
Sbjct: 217 ASWKNRLLNKPGRLALASSVLTSIPTYYMQIAWLPQSICDSID 259


>gb|PNX92520.1| ribonuclease H, partial [Trifolium pratense]
          Length = 865

 Score =  171 bits (432), Expect = 3e-46
 Identities = 90/164 (54%), Positives = 110/164 (67%)
 Frame = -2

Query: 492  KSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINV 313
            ++V +  WKP+++S+NGP  SH+FFADDVLLFSKA  SQ  ++A+    FS  SGLKIN 
Sbjct: 596  EAVQNNSWKPIQISKNGPRFSHLFFADDVLLFSKATCSQGRIMANLFNNFSKASGLKINC 655

Query: 312  AXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRL 133
            A             KMD + S +GIR T +L KYLGF MI GR+ + DY F+ +K+  R 
Sbjct: 656  AKSRALFSKGVPRRKMDKLTSLSGIRSTNALGKYLGFPMITGRVRKDDYHFILDKLNSR- 714

Query: 132  LGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            L SWKNK LNK GRVTL K VLNSIPTYYMQI  LP S C+ ID
Sbjct: 715  LASWKNKFLNKPGRVTLAKSVLNSIPTYYMQISWLPSSICSQID 758


>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
          Length = 1310

 Score =  164 bits (416), Expect = 7e-44
 Identities = 88/165 (53%), Positives = 107/165 (64%)
 Frame = -2

Query: 495  LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
            +++V D  WKP+R+S+NGP  SH+FFADDVLLFSKA  SQ  L+A+    FS  SGLKIN
Sbjct: 617  VEAVQDNCWKPIRVSKNGPCFSHLFFADDVLLFSKATCSQGRLMANLFNNFSKASGLKIN 676

Query: 315  VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
                           K + + S + IR T S   YLGF MI GR+ ++D+ F+ +K+  R
Sbjct: 677  CTKSRAFFSAGVTRRKREKLTSLSSIRSTNSFGNYLGFPMISGRVRKEDFNFILDKLNSR 736

Query: 135  LLGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
             L SWKNKLLNK GRVTL K VLNSIPTYYMQI  LP S C  ID
Sbjct: 737  -LASWKNKLLNKPGRVTLAKSVLNSIPTYYMQISWLPSSICYQID 780


>gb|PNX92714.1| ribonuclease H [Trifolium pratense]
          Length = 1359

 Score =  163 bits (413), Expect = 2e-43
 Identities = 87/164 (53%), Positives = 110/164 (67%)
 Frame = -2

Query: 492  KSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINV 313
            ++VD G WKP+ +SRNGP LSH+ FADDVLLFSKA  SQ+  I +    FS  SGLKIN+
Sbjct: 666  EAVDIGSWKPICISRNGPRLSHLLFADDVLLFSKAKKSQLRFITNLFDVFSRASGLKINI 725

Query: 312  AXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRL 133
            +             K+  + S TGIR T SL KYLGF +++GR ++ D++F+ EK+  R 
Sbjct: 726  SKSRALFSSGIPRAKIQQLTSITGIRSTPSLGKYLGFPILNGRAKKSDFDFIIEKMQTR- 784

Query: 132  LGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            L SWK+KLLNK GR+ L   VL SIP+YYMQI  LPQS CN ID
Sbjct: 785  LASWKSKLLNKPGRLALASSVLTSIPSYYMQIAWLPQSICNIID 828


>dbj|GAU37589.1| hypothetical protein TSUD_365100 [Trifolium subterraneum]
          Length = 648

 Score =  161 bits (408), Expect = 2e-43
 Identities = 84/163 (51%), Positives = 109/163 (66%)
 Frame = -2

Query: 489 SVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINVA 310
           +V +  WKP+++S+NGP  SH+FFADDVLLFSKA  +Q  ++A+    FS  SGL+IN A
Sbjct: 218 AVQNNSWKPLQISKNGPRFSHLFFADDVLLFSKATCAQGRVMANLFNNFSKASGLRINCA 277

Query: 309 XXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRLL 130
                        K+D + + + IR T SL KYLGF MI GR +++D+ F+ +K+  R L
Sbjct: 278 KSRALFSKGVTRRKVDKMTTLSNIRSTTSLGKYLGFPMISGRAKKEDFNFILDKINSR-L 336

Query: 129 GSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            SWKNK LNK GRVTL K VLNSIPTYYMQI  LP + C+ ID
Sbjct: 337 ASWKNKFLNKLGRVTLAKSVLNSIPTYYMQIHWLPSAICSKID 379


>dbj|GAU50504.1| hypothetical protein TSUD_409790 [Trifolium subterraneum]
          Length = 902

 Score =  159 bits (403), Expect = 3e-42
 Identities = 83/163 (50%), Positives = 108/163 (66%)
 Frame = -2

Query: 489 SVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINVA 310
           +V  G W P+ +S NGP LSH+ FADDVLLFSKA  SQ+  I D    FS  SGLKIN++
Sbjct: 386 AVQQGNWAPIHISDNGPRLSHLLFADDVLLFSKAKNSQLRFITDLFDHFSRASGLKINLS 445

Query: 309 XXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRLL 130
                        K++ + S +GIR T+SL+KYLGF ++ GR +R D+ F+ +K+  R L
Sbjct: 446 KSRAFYSAGIPHTKINKLTSISGIRSTVSLDKYLGFPILKGRAKRSDFHFIIDKMQSR-L 504

Query: 129 GSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            SWKNKLLNK GR+ L   V++SIP+YYMQI  LPQS C+ ID
Sbjct: 505 ASWKNKLLNKLGRLALASSVISSIPSYYMQISWLPQSICDSID 547


>dbj|GAU35137.1| hypothetical protein TSUD_394630 [Trifolium subterraneum]
          Length = 547

 Score =  156 bits (394), Expect = 7e-42
 Identities = 77/134 (57%), Positives = 99/134 (73%)
 Frame = -2

Query: 495 LKSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKIN 316
           +K++DDG WKPVRLSRNGPPL H+FFADDVLLF+KA  SQ  +I  +L RF+   GLK+N
Sbjct: 39  IKNIDDGLWKPVRLSRNGPPLFHLFFADDVLLFAKATKSQALIIGSTLKRFADYLGLKVN 98

Query: 315 VAXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQR 136
           +              K+  IV++T I RTLSLEKY GF M+HGRL+R+D+EFLEEK++ +
Sbjct: 99  ITKSKVFFSSTIRRGKISSIVASTNINRTLSLEKYPGFPMMHGRLQRRDFEFLEEKIS-K 157

Query: 135 LLGSWKNKLLNKAG 94
           LL SW++ LLNKAG
Sbjct: 158 LLASWQHNLLNKAG 171


>dbj|GAU41508.1| hypothetical protein TSUD_302460 [Trifolium subterraneum]
          Length = 1075

 Score =  158 bits (399), Expect = 1e-41
 Identities = 82/162 (50%), Positives = 107/162 (66%)
 Frame = -2

Query: 486 VDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINVAX 307
           V  G W P+R+S  GP LSH+ FADDVLLF+KA  SQ+  I +   RF   SGLKIN++ 
Sbjct: 460 VHQGAWDPIRISNTGPHLSHLLFADDVLLFTKAKNSQIRFITNLFDRFGLASGLKINLSK 519

Query: 306 XXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRLLG 127
                       K++ + S +GIR T+SL+KYLGF ++ GR +R D+ F+ +K+  R L 
Sbjct: 520 SRAFYSSGIPQAKINKLTSLSGIRSTVSLDKYLGFPILKGRAKRNDFNFIIDKMQSR-LA 578

Query: 126 SWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
           SWKN+LLNK GR+ L   VL+SIPTYYMQI  LPQS C+ ID
Sbjct: 579 SWKNRLLNKPGRLALASSVLSSIPTYYMQIAWLPQSICDSID 620


>gb|PNY14401.1| ribonuclease H [Trifolium pratense]
          Length = 1359

 Score =  157 bits (397), Expect = 2e-41
 Identities = 82/157 (52%), Positives = 108/157 (68%)
 Frame = -2

Query: 471  WKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINVAXXXXXX 292
            W+P+ ++ +GP LSH+ FADDVLLF+KA  SQ+  I +   RFS  SGLKIN++      
Sbjct: 673  WEPIAITTHGPQLSHLLFADDVLLFTKAKNSQINFITELFERFSHASGLKINLSKSRAYY 732

Query: 291  XXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRLLGSWKNK 112
                   K+  + S +GIR TLSLEKYLGF ++ GR ++ D+ F+ EK+ QR L SWKNK
Sbjct: 733  SSGTPQDKIHRLTSLSGIRNTLSLEKYLGFPILQGRAKKTDFLFIFEKM-QRRLASWKNK 791

Query: 111  LLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            +LNK+GR+ L   VL+SIPTYYMQI  LPQS C+ ID
Sbjct: 792  ILNKSGRLALASSVLSSIPTYYMQITWLPQSICDGID 828


>gb|PNX93226.1| ribonuclease H, partial [Trifolium pratense]
          Length = 851

 Score =  155 bits (393), Expect = 7e-41
 Identities = 84/164 (51%), Positives = 105/164 (64%)
 Frame = -2

Query: 492  KSVDDGYWKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINV 313
            ++V    W PV++S+NGP  SH+FFADDVLLFSKA  +Q   IA+    FS  SGLKIN 
Sbjct: 617  EAVQKNSWSPVQISKNGPRFSHLFFADDVLLFSKATCAQGRTIANLFNSFSIASGLKINC 676

Query: 312  AXXXXXXXXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRL 133
                          K D I + + IR T SL  YLGF M+ GR+++ D+ F+ +K+  R 
Sbjct: 677  VKSRVLFSKGVPRSKRDKITNLSSIRSTNSLGNYLGFPMVTGRVKKADFAFIIDKLNSR- 735

Query: 132  LGSWKNKLLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            L SWKNKLL+K GRVTL K V+NSIPTYYMQI  LP S C+ ID
Sbjct: 736  LASWKNKLLSKPGRVTLAKSVMNSIPTYYMQISWLPSSICSQID 779


>gb|PNX71724.1| ribonuclease H, partial [Trifolium pratense]
          Length = 585

 Score =  152 bits (383), Expect = 4e-40
 Identities = 79/157 (50%), Positives = 104/157 (66%)
 Frame = -2

Query: 471 WKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINVAXXXXXX 292
           W PV +S +GP LSH+ FADDVLLF+KA  SQ+  I +   RFS  SGLKIN+       
Sbjct: 204 WDPVHISNDGPHLSHLLFADDVLLFTKAKNSQIRFITELFDRFSHASGLKINLTKSRAFY 263

Query: 291 XXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRLLGSWKNK 112
                  K++ + S +GIR T SL+KYLGF ++ GR ++ D+ F+ +K+  R L SW+N+
Sbjct: 264 STGTPQDKVNRLTSLSGIRSTTSLDKYLGFPILKGRPKKSDFLFIIDKMQSR-LASWRNR 322

Query: 111 LLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
           LLNK GR+ L   VL+SIPTYYMQI  LPQS C+ ID
Sbjct: 323 LLNKPGRIALASSVLSSIPTYYMQIAWLPQSICDSID 359


>gb|PNY05589.1| ribonuclease H [Trifolium pratense]
          Length = 1360

 Score =  153 bits (387), Expect = 5e-40
 Identities = 81/157 (51%), Positives = 104/157 (66%)
 Frame = -2

Query: 471  WKPVRLSRNGPPLSHVFFADDVLLFSKAIASQVALIADSLTRFSSLSGLKINVAXXXXXX 292
            W PV +S+ GP LSH+ FADDVLLF+KA  SQ+  + +   RFS  SGLKIN++      
Sbjct: 673  WDPVHISKFGPKLSHLLFADDVLLFTKAKNSQIKFMTELFERFSHASGLKINLSKSRAFY 732

Query: 291  XXXXXXXKMDLIVSNTGIRRTLSLEKYLGFSMIHGRLERKDYEFLEEKVTQRLLGSWKNK 112
                   K++ + S +GIR T SLEKYLGF ++ GR ++ D+ F+ EK+  R L SWKNK
Sbjct: 733  SSGTPRDKINRLTSLSGIRNTTSLEKYLGFPILKGRAKKSDFLFIIEKMQSR-LASWKNK 791

Query: 111  LLNKAGRVTLVKPVLNSIPTYYMQIGCLPQSTCNFID 1
            LLNK GR+ L   VL+SIP YYMQI  LPQS C+ ID
Sbjct: 792  LLNKPGRLALASSVLSSIPNYYMQIAWLPQSICDGID 828