BLASTX nr result

ID: Astragalus24_contig00027799 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00027799
         (310 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004495017.1| PREDICTED: nuclear pore complex protein NUP2...    54   6e-06
ref|XP_004495016.1| PREDICTED: nuclear pore complex protein NUP2...    54   6e-06

>ref|XP_004495017.1| PREDICTED: nuclear pore complex protein NUP214 isoform X2 [Cicer
            arietinum]
          Length = 1444

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -1

Query: 271  NQQGSGGFTAFNNVGSNKPPELFTQMRK 188
            + QGSGGF+AF+NVG NKPPELFTQMRK
Sbjct: 1417 SSQGSGGFSAFSNVGGNKPPELFTQMRK 1444


>ref|XP_004495016.1| PREDICTED: nuclear pore complex protein NUP214 isoform X1 [Cicer
            arietinum]
          Length = 1764

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -1

Query: 271  NQQGSGGFTAFNNVGSNKPPELFTQMRK 188
            + QGSGGF+AF+NVG NKPPELFTQMRK
Sbjct: 1737 SSQGSGGFSAFSNVGGNKPPELFTQMRK 1764


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