BLASTX nr result

ID: Astragalus24_contig00027742 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00027742
         (354 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU13874.1| hypothetical protein TSUD_262010 [Trifolium subt...    52   9e-07
ref|XP_013455051.1| LCR [Medicago truncatula] >gi|657386890|gb|K...    50   1e-05

>dbj|GAU13874.1| hypothetical protein TSUD_262010 [Trifolium subterraneum]
          Length = 60

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = -3

Query: 247 TSMMLPPDSKCLGPCNRDCSLACINIGFKSGGCTAYIRRTACCCWN 110
           TS+++PP  KC  PC   C   C   GFK GGC + + +T CCC++
Sbjct: 15  TSLVVPPGGKCAVPCIATCDKDCRAKGFKYGGCYSRLEKTTCCCFH 60


>ref|XP_013455051.1| LCR [Medicago truncatula]
 gb|KEH29099.1| LCR [Medicago truncatula]
          Length = 73

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = -3

Query: 322 MAFHFHQSFXXXXXXXXXXXXXXXVTSMMLPPDSKCLGPCNRDCSLACINIGFKSGGCT- 146
           MA + +QS+                TS++ PP + C  PC+++C+  C + GFK G C  
Sbjct: 1   MASYTNQSYLFGIFCIFFIISSGLATSVVNPPSTVCTIPCDKNCTKDCRDKGFKRGRCVD 60

Query: 145 AYIRRTACCCW 113
            Y++R  CCC+
Sbjct: 61  TYVKRGICCCF 71


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