BLASTX nr result

ID: Astragalus24_contig00027708 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00027708
         (520 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHG04362.1| DEAD-box ATP-dependent RNA helicase 56 [Gossypium...    66   1e-09
gb|PPD71809.1| hypothetical protein GOBAR_DD31290 [Gossypium bar...    64   7e-09

>gb|KHG04362.1| DEAD-box ATP-dependent RNA helicase 56 [Gossypium arboreum]
          Length = 301

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 34/52 (65%), Positives = 38/52 (73%)
 Frame = -1

Query: 157 LQGDNTDGQELRFNGSSASGIHFILDSISLRKDPNIIYCQICSFQPMEIYVD 2
           LQG  +DG E +     AS IHF+LDSI LRK  N+IYC ICSFQPMEIYVD
Sbjct: 3   LQGGKSDGPESQIK-RCASIIHFVLDSIFLRKLANMIYCHICSFQPMEIYVD 53


>gb|PPD71809.1| hypothetical protein GOBAR_DD31290 [Gossypium barbadense]
          Length = 391

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 36/55 (65%), Positives = 40/55 (72%)
 Frame = -1

Query: 166 KKFLQGDNTDGQELRFNGSSASGIHFILDSISLRKDPNIIYCQICSFQPMEIYVD 2
           KKF+Q  N  G E +F   SAS IHF LDSI L+K PN+IYC I SFQPMEIYVD
Sbjct: 158 KKFMQDAN--GLESQFK-RSASKIHFALDSICLKKLPNMIYCDISSFQPMEIYVD 209


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