BLASTX nr result
ID: Astragalus24_contig00027305
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00027305
(376 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX92765.1| ribonuclease H [Trifolium pratense] 87 2e-17
gb|PNX92714.1| ribonuclease H [Trifolium pratense] 86 4e-17
gb|PNY14401.1| ribonuclease H [Trifolium pratense] 84 4e-16
dbj|GAU50504.1| hypothetical protein TSUD_409790 [Trifolium subt... 83 7e-16
dbj|GAU14768.1| hypothetical protein TSUD_204170 [Trifolium subt... 82 9e-16
dbj|GAU35593.1| hypothetical protein TSUD_295290 [Trifolium subt... 81 2e-15
gb|PNX77884.1| ribonuclease H [Trifolium pratense] 80 8e-15
dbj|GAU25827.1| hypothetical protein TSUD_30910 [Trifolium subte... 79 1e-14
dbj|GAU18899.1| hypothetical protein TSUD_228890 [Trifolium subt... 79 1e-14
dbj|GAU20604.1| hypothetical protein TSUD_33400 [Trifolium subte... 79 2e-14
gb|PNY05589.1| ribonuclease H [Trifolium pratense] 78 4e-14
gb|PNX92211.1| ribonuclease H, partial [Trifolium pratense] 78 4e-14
dbj|GAU45929.1| hypothetical protein TSUD_100060 [Trifolium subt... 74 6e-14
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas... 77 7e-14
dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subt... 77 8e-14
gb|ABE80156.1| Ribonuclease H [Medicago truncatula] 76 2e-13
dbj|GAU48622.1| hypothetical protein TSUD_133530 [Trifolium subt... 75 2e-13
dbj|GAU11845.1| hypothetical protein TSUD_75960 [Trifolium subte... 75 4e-13
dbj|GAU23316.1| hypothetical protein TSUD_237700 [Trifolium subt... 75 4e-13
dbj|GAU51472.1| hypothetical protein TSUD_95870 [Trifolium subte... 75 5e-13
>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
Length = 1310
Score = 87.0 bits (214), Expect = 2e-17
Identities = 41/73 (56%), Positives = 47/73 (64%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+A +GY WLL KY SW WIW L A PEKIKFL+W ACH+SIPT +LH
Sbjct: 968 GIYNASSGYKWLLQQKY---NVPSIQSWNWIWKLQA-PEKIKFLIWCACHHSIPTMYMLH 1023
Query: 43 HRGMLDSGACQRC 5
HR M S C RC
Sbjct: 1024 HRNMTSSSICTRC 1036
>gb|PNX92714.1| ribonuclease H [Trifolium pratense]
Length = 1359
Score = 86.3 bits (212), Expect = 4e-17
Identities = 41/74 (55%), Positives = 47/74 (63%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G Y+ +GY W+L+ L SWKWIW+L PEKIKFL W ACHNS+PT LLH
Sbjct: 1016 GTYTTSSGYLWILS---LRSQLQSNQSWKWIWSLHL-PEKIKFLFWLACHNSVPTLALLH 1071
Query: 43 HRGMLDSGACQRCG 2
HR M S AC RCG
Sbjct: 1072 HRNMSSSSACPRCG 1085
>gb|PNY14401.1| ribonuclease H [Trifolium pratense]
Length = 1359
Score = 83.6 bits (205), Expect = 4e-16
Identities = 38/74 (51%), Positives = 48/74 (64%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G Y+ K+GYDWLL+ SW WIW + AGPEKIKFL W ACH+++PT +LH
Sbjct: 1017 GDYTTKSGYDWLLS--QSEQVIIPSHSWSWIWKI-AGPEKIKFLFWLACHDAVPTLSVLH 1073
Query: 43 HRGMLDSGACQRCG 2
HR ++ S C RCG
Sbjct: 1074 HRNIVSSPICSRCG 1087
>dbj|GAU50504.1| hypothetical protein TSUD_409790 [Trifolium subterraneum]
Length = 902
Score = 82.8 bits (203), Expect = 7e-16
Identities = 39/74 (52%), Positives = 46/74 (62%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G Y+ K+GY+WLL+ + L SW WIW L PEKIKF W ACHNS+PT LL+
Sbjct: 736 GSYTTKSGYNWLLSLQNLVTPHNPSLSWSWIWKLQL-PEKIKFFFWLACHNSVPTLSLLN 794
Query: 43 HRGMLDSGACQRCG 2
HR M S C RCG
Sbjct: 795 HRKMNLSATCARCG 808
>dbj|GAU14768.1| hypothetical protein TSUD_204170 [Trifolium subterraneum]
Length = 503
Score = 82.4 bits (202), Expect = 9e-16
Identities = 39/73 (53%), Positives = 45/73 (61%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+A +GY WLL K SWKWIW L A PEKIKFL+W CHNSIPT +LH
Sbjct: 253 GVYTASSGYSWLLKKKQ---HNPNNKSWKWIWNLRA-PEKIKFLIWCICHNSIPTLDMLH 308
Query: 43 HRGMLDSGACQRC 5
HR + C RC
Sbjct: 309 HRHLAQDNICSRC 321
>dbj|GAU35593.1| hypothetical protein TSUD_295290 [Trifolium subterraneum]
Length = 404
Score = 81.3 bits (199), Expect = 2e-15
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = -1
Query: 232 KEIGMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAV 53
K+ G Y+AK+GY+WLL+ + +W WIW L EKIKF W ACHNS+PT
Sbjct: 158 KKNGTYTAKSGYNWLLSLRDPGTIHNPLNAWSWIWKLQLF-EKIKFFFWLACHNSVPTLY 216
Query: 52 LLHHRGMLDSGACQRCG 2
LL+HR M S C RCG
Sbjct: 217 LLNHRKMSSSATCTRCG 233
>gb|PNX77884.1| ribonuclease H [Trifolium pratense]
Length = 488
Score = 79.7 bits (195), Expect = 8e-15
Identities = 39/74 (52%), Positives = 45/74 (60%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G Y+AK+GY WLL+ K SW WIW L EKIKFL W ACHNS+PT +L+H
Sbjct: 188 GSYTAKSGYSWLLSQKDSANTPSISFSWIWIWKLHL-LEKIKFLYWLACHNSVPTLLLIH 246
Query: 43 HRGMLDSGACQRCG 2
HR M C RCG
Sbjct: 247 HRKMNPIFTCPRCG 260
>dbj|GAU25827.1| hypothetical protein TSUD_30910 [Trifolium subterraneum]
Length = 592
Score = 79.3 bits (194), Expect = 1e-14
Identities = 36/72 (50%), Positives = 44/72 (61%)
Frame = -1
Query: 217 YSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLHHR 38
Y+ K+GY+WLL+ + L SW WIW + PEKIKF W ACHN +PT LL+HR
Sbjct: 273 YTTKSGYNWLLSLRDLVINHNPSHSWSWIWKIQL-PEKIKFFFWLACHNFVPTLSLLNHR 331
Query: 37 GMLDSGACQRCG 2
M S C RCG
Sbjct: 332 KMSHSATCTRCG 343
>dbj|GAU18899.1| hypothetical protein TSUD_228890 [Trifolium subterraneum]
Length = 1098
Score = 79.3 bits (194), Expect = 1e-14
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+AK+GYDWLL+ + SW WIW + GPEK+K L W ACH ++PT +LH
Sbjct: 756 GVYTAKSGYDWLLSRQ--EQVIGPFHSWSWIWKI-TGPEKLKILFWLACHEAVPTLAMLH 812
Query: 43 HRGMLDSGACQRC 5
HR + S C RC
Sbjct: 813 HRNIASSPICPRC 825
>dbj|GAU20604.1| hypothetical protein TSUD_33400 [Trifolium subterraneum]
Length = 1174
Score = 79.0 bits (193), Expect = 2e-14
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y K+GYDWLL SW WIW + AGPEK+KFL W +CH+++PT +LH
Sbjct: 831 GVYITKSGYDWLL--AQTDQVTIPLNSWSWIWQI-AGPEKLKFLFWLSCHDAVPTLSMLH 887
Query: 43 HRGMLDSGACQRCG 2
HR + C RCG
Sbjct: 888 HRNIASCPICTRCG 901
>gb|PNY05589.1| ribonuclease H [Trifolium pratense]
Length = 1360
Score = 77.8 bits (190), Expect = 4e-14
Identities = 35/74 (47%), Positives = 46/74 (62%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+ K+GYDWLL+ K +W W+W L A PEK+KFL W ACH+++PT LH
Sbjct: 1017 GVYTTKSGYDWLLSRK--EQVPSHPHTWAWLWKLQA-PEKLKFLFWLACHDAVPTLTTLH 1073
Query: 43 HRGMLDSGACQRCG 2
R + S C RCG
Sbjct: 1074 RRNIAPSPNCPRCG 1087
>gb|PNX92211.1| ribonuclease H, partial [Trifolium pratense]
Length = 1462
Score = 77.8 bits (190), Expect = 4e-14
Identities = 35/74 (47%), Positives = 46/74 (62%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+ K+GYDWLL+ K +W W+W L A PEK+KFL W ACH+++PT LH
Sbjct: 1232 GVYTTKSGYDWLLSRK--EQVPSHPHTWAWLWKLQA-PEKLKFLFWLACHDAVPTLTTLH 1288
Query: 43 HRGMLDSGACQRCG 2
R + S C RCG
Sbjct: 1289 RRNIAPSPNCPRCG 1302
>dbj|GAU45929.1| hypothetical protein TSUD_100060 [Trifolium subterraneum]
Length = 188
Score = 74.3 bits (181), Expect = 6e-14
Identities = 32/73 (43%), Positives = 42/73 (57%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+AK GY W N +W W+W +PA PEKIKF +WTA HN++PT +
Sbjct: 98 GLYTAKDGYSWH-NRSTFTDNATNAITWNWVWHIPA-PEKIKFFIWTALHNALPTKTMFS 155
Query: 43 HRGMLDSGACQRC 5
HRG+ C RC
Sbjct: 156 HRGLFQINLCPRC 168
>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 77.0 bits (188), Expect = 7e-14
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G YSAK+GY WLL+ L SW WI EK KFL+W ACH+S+PTA LLH
Sbjct: 527 GTYSAKSGYQWLLS---LSGNDNNTHSWSWILKKKIS-EKYKFLIWLACHDSLPTAALLH 582
Query: 43 HRGMLDSGACQRCG 2
HR ++ S C RCG
Sbjct: 583 HRQIIASATCARCG 596
>dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subterraneum]
Length = 1375
Score = 77.0 bits (188), Expect = 8e-14
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+AK GY WL N SW W+W +PA PEKIKF +W+A HN++PT +L
Sbjct: 1146 GLYTAKEGYYWL-NRFAFSDTDTDDISWNWVWHIPA-PEKIKFFIWSALHNALPTKSMLS 1203
Query: 43 HRGMLDSGACQRC 5
HRG+L + C RC
Sbjct: 1204 HRGLLQANLCPRC 1216
>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
Length = 438
Score = 75.9 bits (185), Expect = 2e-13
Identities = 35/74 (47%), Positives = 41/74 (55%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G YS K+G+ WLL + SW WIW L PEK KFL+W AC N +PT LLH
Sbjct: 93 GTYSTKSGFHWLLTFRVPATDIIPHPSWSWIWNLQV-PEKYKFLIWLACQNVVPTLSLLH 151
Query: 43 HRGMLDSGACQRCG 2
R + S C RCG
Sbjct: 152 RRNIAPSPTCARCG 165
>dbj|GAU48622.1| hypothetical protein TSUD_133530 [Trifolium subterraneum]
Length = 350
Score = 75.5 bits (184), Expect = 2e-13
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+A+ GY WL N SW W+W +PA PEKIKF +WTA H ++PT +L
Sbjct: 71 GLYTARDGYHWL-NRNDFSENPTNVVSWSWLWHIPA-PEKIKFFLWTALHKALPTKAMLS 128
Query: 43 HRGMLDSGACQRC 5
HRG+L +C RC
Sbjct: 129 HRGILHDSSCPRC 141
>dbj|GAU11845.1| hypothetical protein TSUD_75960 [Trifolium subterraneum]
Length = 386
Score = 74.7 bits (182), Expect = 4e-13
Identities = 35/73 (47%), Positives = 44/73 (60%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y+A+ GY WL N SW W+W LPA PEKIKF +WT HNS+PT +L
Sbjct: 98 GIYTARDGYHWL-NRYAFSANPTSVVSWSWLWHLPA-PEKIKFFIWTLLHNSLPTRDMLT 155
Query: 43 HRGMLDSGACQRC 5
HRG++ C RC
Sbjct: 156 HRGIIHGNMCPRC 168
>dbj|GAU23316.1| hypothetical protein TSUD_237700 [Trifolium subterraneum]
Length = 418
Score = 74.7 bits (182), Expect = 4e-13
Identities = 35/74 (47%), Positives = 42/74 (56%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G Y+ K+G++WL + + SW WIW L PEKIKF W CHNS+PT LL
Sbjct: 100 GSYTTKSGFNWLFSLQNPVTPHNPSFSWSWIWKLQL-PEKIKFFFWLVCHNSVPTLSLLD 158
Query: 43 HRGMLDSGACQRCG 2
HR M S C RCG
Sbjct: 159 HRKMNLSATCARCG 172
>dbj|GAU51472.1| hypothetical protein TSUD_95870 [Trifolium subterraneum]
Length = 1682
Score = 74.7 bits (182), Expect = 5e-13
Identities = 35/73 (47%), Positives = 42/73 (57%)
Frame = -1
Query: 223 GMYSAKAGYDWLLN*KYLXXXXXXXXSWKWIWTLPAGPEKIKFLVWTACHNSIPTAVLLH 44
G+Y++ +GY WLL K WKWIW L A PEKIKF +W HNSIPT +LH
Sbjct: 1560 GVYTSSSGYSWLLKKKQYNPNNKS---WKWIWNLRA-PEKIKFFIWCISHNSIPTLDMLH 1615
Query: 43 HRGMLDSGACQRC 5
HR + C RC
Sbjct: 1616 HRHLAQDNICFRC 1628