BLASTX nr result

ID: Astragalus24_contig00027129 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00027129
         (317 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601745.1| Rho GDP-dissociation inhibitor-like protein ...    55   1e-06

>ref|XP_003601745.1| Rho GDP-dissociation inhibitor-like protein [Medicago truncatula]
 gb|AES71996.1| Rho GDP-dissociation inhibitor-like protein [Medicago truncatula]
          Length = 230

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 37/75 (49%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +3

Query: 96  MSAAVGGVSSTTKESVSYTLPHLEEDSDAPNN-SDDAIXXXXXXXXXXXXXXXXXXXXLG 272
           MS+ VG VSSTT + V Y     E++ DAPN+ SDDA                     LG
Sbjct: 1   MSSTVGAVSSTTND-VPYNSHLEEQEDDAPNSISDDA------EETEPEDDDDDKELDLG 53

Query: 273 PQFTLKEQLEKDKDD 317
           PQFTLKEQLEKDKDD
Sbjct: 54  PQFTLKEQLEKDKDD 68


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