BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00027074
         (570 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subte...   204   3e-61
gb|PNX63257.1| retrovirus-related Pol polyprotein from transposo...   197   2e-60
gb|PNX63176.1| retrovirus-related Pol polyprotein from transposo...   194   6e-59
gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]      199   1e-56
gb|PNY10806.1| histone deacetylase [Trifolium pratense]               199   1e-55
gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]        177   6e-52
gb|PNX90864.1| retrovirus-related Pol polyprotein from transposo...   178   5e-51
gb|KYP36193.1| hypothetical protein KK1_042704 [Cajanus cajan]        172   1e-50
gb|PNY05793.1| histone deacetylase [Trifolium pratense]               185   1e-50
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   184   2e-50
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   184   2e-50
gb|PNY18109.1| retrovirus-related Pol polyprotein from transposo...   184   3e-50
gb|PNX79340.1| retrovirus-related Pol polyprotein from transposo...   180   3e-50
gb|PNX89792.1| retrovirus-related Pol polyprotein from transposo...   175   6e-50
gb|PNY02599.1| retrovirus-related Pol polyprotein from transposo...   182   6e-50
gb|PNX90878.1| retrovirus-related Pol polyprotein from transposo...   173   7e-50
gb|PNX99033.1| retrovirus-related Pol polyprotein from transposo...   182   8e-50
gb|PNX89801.1| retrovirus-related Pol polyprotein from transposo...   175   8e-50
gb|KYP36194.1| Retrovirus-related Pol polyprotein from transposo...   174   8e-48
gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]      177   8e-48

>dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subterraneum]
          Length = 392

 Score =  204 bits (519), Expect = 3e-61
 Identities = 98/154 (63%), Positives = 124/154 (80%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           LVQDQMLFTWLLSTL+ESVLPR + CRH+ Q WD+IHKH+ +HLKAKVRQLRSELKN KK
Sbjct: 84  LVQDQMLFTWLLSTLAESVLPRTIGCRHAFQVWDQIHKHFEAHLKAKVRQLRSELKNVKK 143

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
           GT++I ++  R+  +AD+L +IG++I +Q         LPEEYN FVMMIYG+SDSPS+ 
Sbjct: 144 GTKSITEFVLRVRVIADTLISIGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLY 203

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTG 107
           DIE L+LVQE+QL+KFRQEL+  + SAN+ H+ G
Sbjct: 204 DIEGLLLVQESQLEKFRQELSTPSASANLAHSRG 237


>gb|PNX63257.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 247

 Score =  197 bits (501), Expect = 2e-60
 Identities = 94/154 (61%), Positives = 122/154 (79%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           +VQDQMLFTWLLSTL+ESVLPR + C H+ Q W++IHK++ +HLKAKVRQLRSELK  KK
Sbjct: 83  IVQDQMLFTWLLSTLAESVLPRTIGCCHAFQVWEQIHKYFNAHLKAKVRQLRSELKTIKK 142

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
           GT+TI ++  R+ ++AD+L ++G+++ +Q         LPEEYN FVMMIYG+SDSPS+ 
Sbjct: 143 GTKTITEFVLRVRAIADTLLSVGDSVTEQDQIDSILDGLPEEYNPFVMMIYGRSDSPSLY 202

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTG 107
           DIE L+LVQE+QL+KFRQEL    VSAN+ HT G
Sbjct: 203 DIEGLLLVQESQLEKFRQELMVPNVSANIAHTGG 236


>gb|PNX63176.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 273

 Score =  194 bits (494), Expect = 6e-59
 Identities = 94/166 (56%), Positives = 125/166 (75%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           LVQDQMLFTWLLSTL+ESVLPR +SCRH+ Q W++IH ++ +  KAK+RQLRSELK  KK
Sbjct: 107 LVQDQMLFTWLLSTLAESVLPRTISCRHAFQVWEEIHNYFNAQTKAKIRQLRSELKTVKK 166

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
           GT+TI ++  R+ ++A++L +IG+++ +Q         LPEEYN FVMM+YG+SDSPS+ 
Sbjct: 167 GTKTITEFILRVRAVANTLISIGDSVSEQDQIDSILDGLPEEYNPFVMMMYGRSDSPSLF 226

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           DIE L+LVQE+QL+KFRQEL     SANV HT G   + GS  + +
Sbjct: 227 DIEGLLLVQESQLEKFRQELAVPNASANVAHTKGGRNSSGSRGRGR 272


>gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]
          Length = 720

 Score =  199 bits (506), Expect = 1e-56
 Identities = 97/154 (62%), Positives = 122/154 (79%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           LVQDQMLFTWLLSTL+ESVLPR + CRH+ Q WD+IHK++ +HLKAKVRQLRSELK  KK
Sbjct: 85  LVQDQMLFTWLLSTLAESVLPRTVGCRHAFQVWDQIHKYFDAHLKAKVRQLRSELKTVKK 144

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
           GT++I ++  R+ ++AD+L +IG++I +Q         LPEEYN FVMMIYG+SDSPS+ 
Sbjct: 145 GTKSISEFVLRVRAIADTLISIGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLF 204

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTG 107
           DIE L+LVQE+QL KFRQEL+    SANV H+ G
Sbjct: 205 DIEGLLLVQESQLAKFRQELSLPAASANVAHSNG 238


>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
          Length = 1441

 Score =  199 bits (506), Expect = 1e-55
 Identities = 97/154 (62%), Positives = 122/154 (79%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           LVQDQMLFTWLLSTL+ESVLPR + CRH+ Q WD+IHK++ +HLKAKVRQLRSELK  KK
Sbjct: 85  LVQDQMLFTWLLSTLAESVLPRTVGCRHAFQVWDQIHKYFDAHLKAKVRQLRSELKTVKK 144

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
           GT++I ++  R+ ++AD+L +IG++I +Q         LPEEYN FVMMIYG+SDSPS+ 
Sbjct: 145 GTKSISEFVLRVRAIADTLISIGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLF 204

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTG 107
           DIE L+LVQE+QL KFRQEL+    SANV H+ G
Sbjct: 205 DIEGLLLVQESQLAKFRQELSLPAASANVAHSNG 238


>gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]
          Length = 280

 Score =  177 bits (448), Expect = 6e-52
 Identities = 86/145 (59%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
 Frame = -3

Query: 553 MLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKKG-TRT 377
           MLF+WLLS+LSESVLPR+L C+HS + WDKIHKHYYSHL AK RQLRSELK++KKG ++ 
Sbjct: 1   MLFSWLLSSLSESVLPRVLGCKHSYEIWDKIHKHYYSHLHAKKRQLRSELKSSKKGPSQP 60

Query: 376 IFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSISDIES 197
           I +Y  RI  + +SL  +G+ + DQ         LPE+YN+F+MMIYG+SDS S++D+ES
Sbjct: 61  ISEYILRIREIINSLIVVGDLVTDQDQIDTILDGLPEDYNSFIMMIYGRSDSISVTDVES 120

Query: 196 LMLVQETQLDKFRQELNATTVSANV 122
           L+LVQE QL+K+RQ+L + +VS NV
Sbjct: 121 LLLVQEAQLEKYRQDLTSPSVSVNV 145


>gb|PNX90864.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 401

 Score =  178 bits (451), Expect = 5e-51
 Identities = 85/166 (51%), Positives = 120/166 (72%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L +DQ LFTWLLST+S++VLPR+LSC+H+ + WD IHK++ S LKA+ RQLRSELKNTKK
Sbjct: 93  LFKDQSLFTWLLSTISDNVLPRVLSCKHAYEVWDTIHKYFNSVLKARARQLRSELKNTKK 152

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
            TR++ +Y  RI S+ +SL A+G+ +  Q         LPEEYN+FVM++Y + ++P++ 
Sbjct: 153 LTRSVNEYLLRIKSIVNSLIAVGDVVSVQEQVDAVLEGLPEEYNSFVMLVYSRFETPTVE 212

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           D+E+L+L+QE Q +KFRQEL   +VSANV H   K  +     +SQ
Sbjct: 213 DVEALLLLQEVQFEKFRQELTNPSVSANVAHMNSKSNSPNQEGESQ 258


>gb|KYP36193.1| hypothetical protein KK1_042704 [Cajanus cajan]
          Length = 221

 Score =  172 bits (435), Expect = 1e-50
 Identities = 85/144 (59%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
 Frame = -3

Query: 553 MLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKKG-TRT 377
           MLF+WLLS+LSE VLPR+L C+HS + WDKIHKHYYSHL AK RQLRSELK++K G ++ 
Sbjct: 1   MLFSWLLSSLSEPVLPRVLGCKHSYEIWDKIHKHYYSHLHAKKRQLRSELKSSKIGPSQP 60

Query: 376 IFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSISDIES 197
           I +Y  RI ++ +SL A+GE + +Q         LPE+YN+FVMMIYG+SDS S++D+ES
Sbjct: 61  ISEYILRIRAIINSLIAVGELVTNQDQIDTILDGLPEDYNSFVMMIYGRSDSISVTDVES 120

Query: 196 LMLVQETQLDKFRQELNATTVSAN 125
           L+LVQE QL+K+RQ+L + +VS N
Sbjct: 121 LLLVQEAQLEKYRQDLTSPSVSVN 144


>gb|PNY05793.1| histone deacetylase [Trifolium pratense]
          Length = 1485

 Score =  185 bits (469), Expect = 1e-50
 Identities = 90/165 (54%), Positives = 122/165 (73%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L+QDQ LFTWLLSTLS+ VLPR+L C+H+ Q WDKIHK++ S LKA+ RQLRSELKNTKK
Sbjct: 106 LMQDQTLFTWLLSTLSDGVLPRVLGCKHAYQVWDKIHKYFNSLLKARARQLRSELKNTKK 165

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
             R+I +Y  RI ++ DSLTAIG+ + DQ         LPEE+N+FVMMIY + D+P++ 
Sbjct: 166 LARSIGEYLLRIKTIIDSLTAIGDTVSDQEHIDAILEGLPEEFNSFVMMIYSRLDTPTVE 225

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQS 74
           D+E+L++VQE Q +KFRQEL +  VSAN+  +  K  A+  + ++
Sbjct: 226 DVEALLMVQEAQFEKFRQELASPNVSANLAQSEAKTSAESVNHEN 270


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score =  184 bits (467), Expect = 2e-50
 Identities = 87/166 (52%), Positives = 123/166 (74%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L++DQ LFTWLLSTLS+ VLPR+LSCRH+ + WDKIHK++ S LK++ RQLRSELKNTKK
Sbjct: 58  LIKDQTLFTWLLSTLSDGVLPRVLSCRHAHEVWDKIHKYFNSVLKSRARQLRSELKNTKK 117

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
            +R++ +Y  RI S+ +SL A+G+ + +Q         LPEE+N+FVMM+Y + D+P++ 
Sbjct: 118 LSRSVNEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVE 177

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           D+E+L+L+QE Q +KF+QEL + +VSANV HT        S  +SQ
Sbjct: 178 DVEALLLLQEAQFEKFKQELTSPSVSANVAHTETNASDSNSEHESQ 223


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score =  184 bits (467), Expect = 2e-50
 Identities = 87/166 (52%), Positives = 123/166 (74%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L++DQ LFTWLLSTLS+ VLPR+LSCRH+ + WDKIHK++ S LK++ RQLRSELKNTKK
Sbjct: 58  LIKDQTLFTWLLSTLSDGVLPRVLSCRHAHEVWDKIHKYFNSVLKSRARQLRSELKNTKK 117

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
            +R++ +Y  RI S+ +SL A+G+ + +Q         LPEE+N+FVMM+Y + D+P++ 
Sbjct: 118 LSRSVNEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVE 177

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           D+E+L+L+QE Q +KF+QEL + +VSANV HT        S  +SQ
Sbjct: 178 DVEALLLLQEAQFEKFKQELTSPSVSANVAHTETNASDSNSEHESQ 223


>gb|PNY18109.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1239

 Score =  184 bits (466), Expect = 3e-50
 Identities = 86/166 (51%), Positives = 123/166 (74%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           LV+DQ LFTWLLST+S+ VLPR+LSCRH+ + WDKIHK++ S LK++ RQLRSELKNTKK
Sbjct: 91  LVKDQTLFTWLLSTISDGVLPRVLSCRHAYEVWDKIHKYFNSVLKSRARQLRSELKNTKK 150

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
            +R++ +Y  RI S+ +SL A+G+ + +Q         LPEE+N+FVMM+Y + D+P++ 
Sbjct: 151 NSRSVNEYLLRIKSIVNSLVAVGDIVTEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVE 210

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           D+E+L+L+QE Q +KF+QEL   +VSAN+ HT        S ++SQ
Sbjct: 211 DVEALLLLQEVQFEKFKQELTNPSVSANIAHTAAHTSDSTSETESQ 256


>gb|PNX79340.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 589

 Score =  180 bits (456), Expect = 3e-50
 Identities = 84/152 (55%), Positives = 117/152 (76%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L +DQ LFTWLLST+S+ VLPR+LSC+HS + W+KIHK++ S LK++ RQLRSELKNTKK
Sbjct: 91  LFKDQTLFTWLLSTISDGVLPRVLSCKHSYEVWEKIHKYFNSVLKSRARQLRSELKNTKK 150

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
             R++ +Y  R+ S+ +SL A+G+N+ +Q         LPEEYN+FVMMIY + ++P++ 
Sbjct: 151 HARSVNEYLLRVKSIVNSLIAVGDNVSEQEQVDAILEGLPEEYNSFVMMIYSRFETPTVE 210

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHT 113
           D+E+L+L+QE Q +KFRQEL   +VSANV HT
Sbjct: 211 DVEALLLLQEVQFEKFRQELANPSVSANVAHT 242


>gb|PNX89792.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 403

 Score =  175 bits (444), Expect = 6e-50
 Identities = 83/166 (50%), Positives = 117/166 (70%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L +DQ LFTWLLST+S++VLPR+L C+HS   WDKIHK++ S LK++ RQLRSELKNTKK
Sbjct: 94  LFKDQSLFTWLLSTISDAVLPRVLHCKHSHXVWDKIHKYFNSVLKSRTRQLRSELKNTKK 153

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
             R++ +Y  RI S+ +SL A+G+ + +Q         LPEE+N+FVMM+Y + +SP++ 
Sbjct: 154 LARSVNEYLLRIKSIVNSLIAVGDTVSEQEQVDAILEGLPEEFNSFVMMVYSRFESPTVE 213

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           D+E+L+L+QE Q +KFRQEL   +VSAN+ H   K       +  Q
Sbjct: 214 DVEALLLLQEVQFEKFRQELTNPSVSANIAHKESKNSNSSDDADEQ 259


>gb|PNY02599.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 956

 Score =  182 bits (463), Expect = 6e-50
 Identities = 87/155 (56%), Positives = 120/155 (77%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           LV+DQ LFTWLLSTLSESVLPR+L+C+H+ + WDKIH+++ S LK++ RQLRSELKNTKK
Sbjct: 100 LVKDQTLFTWLLSTLSESVLPRVLNCKHAHEVWDKIHRYFNSVLKSRARQLRSELKNTKK 159

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
             R+I +Y  RI ++ +SL A+G+ + +Q         LPEE+N+FVMMIY + DSP++ 
Sbjct: 160 HARSINEYLLRIKTIVNSLIAVGDVVSEQEQVDAILEGLPEEFNSFVMMIYSRFDSPTVE 219

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGK 104
           D+E+L+L+QE Q +KF+QEL+  TVSA+V HT  K
Sbjct: 220 DVEALLLLQEAQFEKFKQELSTPTVSAHVAHTEAK 254


>gb|PNX90878.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 324

 Score =  173 bits (438), Expect = 7e-50
 Identities = 85/166 (51%), Positives = 118/166 (71%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L +DQ LFTWLLST+S+ VLPR+LSC+HS + W+KIH ++ S LK++ RQLRSELKNTKK
Sbjct: 92  LFKDQSLFTWLLSTISDGVLPRVLSCKHSYEVWEKIHTYFNSVLKSRARQLRSELKNTKK 151

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
            +RT+ +Y  RI S+ +SL AIG+ + ++         L EE+N FVMM+Y +SD+P + 
Sbjct: 152 HSRTVNEYLLRIKSIVNSLIAIGDVVSEREQVDAILEGLSEEFNPFVMMVYSRSDTPKVE 211

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           D+E+L+L+QE+Q +KFRQEL   +VSANV     K     S S+ Q
Sbjct: 212 DVEALLLLQESQFEKFRQELANPSVSANVAQIESKDSNHNSDSEGQ 257


>gb|PNX99033.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1101

 Score =  182 bits (463), Expect = 8e-50
 Identities = 87/151 (57%), Positives = 119/151 (78%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           LV+DQ LFTWLLSTLSESVLPR+LSCRH+ + WDKIHK++ S LK++ RQLRSELKNTKK
Sbjct: 94  LVKDQTLFTWLLSTLSESVLPRVLSCRHAHEVWDKIHKYFNSVLKSRTRQLRSELKNTKK 153

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
             R+I +Y  RI ++ +SL A+G+++ +Q         LPEE+N+FVMM+Y + DSP++ 
Sbjct: 154 LARSINEYLLRIKTIVNSLIAVGDSVSEQEQVDAILEGLPEEFNSFVMMVYSRFDSPTVE 213

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEH 116
           D+E+L+L+QE Q +KF+QEL+  +VSANV H
Sbjct: 214 DVEALLLLQEAQFEKFKQELSNPSVSANVAH 244


>gb|PNX89801.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 403

 Score =  175 bits (443), Expect = 8e-50
 Identities = 82/166 (49%), Positives = 117/166 (70%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L +DQ LFTWLLST+S++VLPR+L C+HS + WDKIHK++ S LK++ RQLRSELKNTKK
Sbjct: 94  LFKDQSLFTWLLSTISDAVLPRVLHCKHSHEVWDKIHKYFNSVLKSRTRQLRSELKNTKK 153

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
             R++ +Y  RI S+ +SL  +G+ + +Q         LPEE+N+FVMM+Y + +SP++ 
Sbjct: 154 LARSVNEYLLRIKSIVNSLIVVGDTVSEQEQVDAILEGLPEEFNSFVMMVYSRFESPTVE 213

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           D+E+L+L+QE Q +KFRQEL   +VSAN+ H   K       +  Q
Sbjct: 214 DVEALLLLQEVQFEKFRQELTNPSVSANIAHKESKNSNSSDDADEQ 259


>gb|KYP36194.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 603

 Score =  174 bits (440), Expect = 8e-48
 Identities = 86/144 (59%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
 Frame = -3

Query: 553 MLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKKG-TRT 377
           MLF+WLLS+LSESVLPR+L C+HS + WDKIHKHYYSHL AK RQLRSELK++K G ++ 
Sbjct: 1   MLFSWLLSSLSESVLPRVLGCKHSYEIWDKIHKHYYSHLHAKKRQLRSELKSSKIGPSQP 60

Query: 376 IFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSISDIES 197
           I +Y  RI ++ +SL A+GE + +Q         LPE+YN+FVMMIYG+SDS S++D+ES
Sbjct: 61  ISEYILRIRAIINSLIAVGELVTNQDQIDTILDGLPEDYNSFVMMIYGRSDSISVTDVES 120

Query: 196 LMLVQETQLDKFRQELNATTVSAN 125
           L+LVQE QL+K+RQ+L + +VS N
Sbjct: 121 LLLVQEAQLEKYRQDLTSPSVSVN 144


>gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1418

 Score =  177 bits (448), Expect = 8e-48
 Identities = 84/166 (50%), Positives = 120/166 (72%)
 Frame = -3

Query: 568 LVQDQMLFTWLLSTLSESVLPRMLSCRHSAQAWDKIHKHYYSHLKAKVRQLRSELKNTKK 389
           L +DQ LFTWLLST+S+SVLPR+LSC+H+ + WDKIH+++ S LK++ RQLRSELKNTKK
Sbjct: 92  LFKDQTLFTWLLSTMSDSVLPRVLSCKHAHEVWDKIHRYFNSVLKSRARQLRSELKNTKK 151

Query: 388 GTRTIFKYATRIHSLADSLTAIGENIHDQXXXXXXXXXLPEEYNAFVMMIYGKSDSPSIS 209
            +R++ +Y  RI S+ +SL A+G+ + +Q         LPEE+N FVMM+Y + ++P++ 
Sbjct: 152 LSRSVNEYLLRIKSIVNSLVAVGDTVSEQEQVDAILEGLPEEFNPFVMMVYSRFETPTVE 211

Query: 208 DIESLMLVQETQLDKFRQELNATTVSANVEHTTGKFKAKGSSSQSQ 71
           D+E+L+L+QE Q DKFRQEL   +VSANV H   K       ++ Q
Sbjct: 212 DVEALLLLQEVQFDKFRQELANPSVSANVAHKETKVNNSEMDAEDQ 257