BLASTX nr result
ID: Astragalus24_contig00026827
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00026827
(588 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 107 2e-44
gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 107 2e-44
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 123 6e-43
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 120 1e-41
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN... 124 6e-41
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 102 1e-39
gb|OIT39959.1| histone deacetylase 14 [Nicotiana attenuata] 88 3e-36
gb|KYP77525.1| Retrovirus-related Pol polyprotein LINE-1, partia... 108 1e-35
gb|PKA52309.1| integrator complex subunit 11 [Apostasia shenzhen... 92 6e-35
gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 88 8e-35
gb|PKA50244.1| hypothetical protein AXF42_Ash017838 [Apostasia s... 91 1e-34
gb|PKA50536.1| ataxia telangiectasia mutated family protein [Apo... 95 1e-34
gb|AQK52011.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 88 1e-34
gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 91 1e-34
gb|ONL97201.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 87 2e-34
gb|AQK86945.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 90 2e-34
gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 89 3e-34
gb|AQK68857.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 87 4e-34
gb|PKU60047.1| ataxia telangiectasia mutated family protein [Den... 90 4e-34
gb|PKU64612.1| integrator complex subunit 11 [Dendrobium catenatum] 91 5e-34
>gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 925
Score = 107 bits (268), Expect(3) = 2e-44
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
EVK+G++ I +V RFKYLGSIVQ D E+E DV+H+IQAGW+KWRRAS VL D KVPL LK
Sbjct: 809 EVKIGEQAITKVPRFKYLGSIVQQDAELEGDVHHRIQAGWMKWRRASGVLCDKKVPLKLK 868
Query: 490 GKFYRTAVR 516
GKFYRTAVR
Sbjct: 869 GKFYRTAVR 877
Score = 67.8 bits (164), Expect(3) = 2e-44
Identities = 32/52 (61%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
HIQE RCMLFAD VL G+SR+E+NE++E WR+ALE++G +SRS T YM
Sbjct: 744 HIQEPVPRCMLFADDIVLTGDSREEINEKIERWRQALEEHGLRISRSKTEYM 795
Score = 52.8 bits (125), Expect(3) = 2e-44
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRTQ G ++DF IT+GLH G TLSPY+FTLV+D
Sbjct: 706 SVRTQSGVSEDFPITIGLHQGSTLSPYLFTLVMD 739
>gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 819
Score = 107 bits (268), Expect(3) = 2e-44
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
EVK+G++ I +V RFKYLGSIVQ D E+E DV+H+IQAGW+KWRRAS VL D KVPL LK
Sbjct: 617 EVKIGEQAITKVPRFKYLGSIVQQDAELEGDVHHRIQAGWMKWRRASGVLCDKKVPLKLK 676
Query: 490 GKFYRTAVR 516
GKFYRTAVR
Sbjct: 677 GKFYRTAVR 685
Score = 67.4 bits (163), Expect(3) = 2e-44
Identities = 31/52 (59%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
H+QE RCMLFAD VL G+SR+E+NE++E WR+ALE++G +SRS T YM
Sbjct: 552 HVQEPVPRCMLFADDIVLTGDSREEINEKIERWRQALEEHGLRISRSKTEYM 603
Score = 52.8 bits (125), Expect(3) = 2e-44
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRTQ G ++DF IT+GLH G TLSPY+FTLV+D
Sbjct: 514 SVRTQSGVSEDFPITIGLHQGSTLSPYLFTLVMD 547
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 123 bits (308), Expect(2) = 6e-43
Identities = 60/70 (85%), Positives = 62/70 (88%)
Frame = +1
Query: 307 LEVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNL 486
LEVKVGD IIPQVTRFKYLGS VQNDGEIE DV+H+IQAGWLKWRRAS VL D KVPL L
Sbjct: 428 LEVKVGDHIIPQVTRFKYLGSFVQNDGEIEADVSHRIQAGWLKWRRASSVLCDKKVPLKL 487
Query: 487 KGKFYRTAVR 516
GKFYRTAVR
Sbjct: 488 TGKFYRTAVR 497
Score = 79.3 bits (194), Expect(2) = 6e-43
Identities = 40/52 (76%), Positives = 44/52 (84%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
HIQELA RCMLFAD VL+GESR+E+N RLETWR+ALE YGF LSRS T YM
Sbjct: 364 HIQELAPRCMLFADDVVLVGESREEVNGRLETWRQALEAYGFRLSRSKTKYM 415
Score = 58.2 bits (139), Expect = 2e-06
Identities = 59/201 (29%), Positives = 81/201 (40%), Gaps = 9/201 (4%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLDVFNTFKS*HRDVCFLQMS*LESQG-- 176
SV+TQ G T+DF IT+GLH G TL+PY+FTLVLDV C L + G
Sbjct: 326 SVKTQDGTTEDFPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGES 385
Query: 177 ----TN*MRGWRLGDEP*KTTAST*AEAVHSI*IMGCNFSKRQSISSFRGESRRSYHTTS 344
+ WR E S M CNFS R+S S+ E + H
Sbjct: 386 REEVNGRLETWRQALEAYGFRLSR-----SKTKYMECNFSGRRSRSTL--EVKVGDHIIP 438
Query: 345 YTI*ISWVHXXXXXXXXXXXXPSN---SSWMVEMEEGLMCFMGYKSTTQFEGKILSDSGK 515
++ S+ + W+ + K + GK +
Sbjct: 439 QVTRFKYLGSFVQNDGEIEADVSHRIQAGWL-KWRRASSVLCDKKVPLKLTGKFYRTA-- 495
Query: 516 TRLPMLYGT*GWAVRNQHENK 578
R +LYGT WAV++QHEN+
Sbjct: 496 VRPALLYGTECWAVKSQHENQ 516
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 120 bits (302), Expect(2) = 1e-41
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
EVK+GD IIPQVTRFKYLGS++Q+DGEIE DVNH+IQAGW+KWR+AS VL D KVP+ LK
Sbjct: 175 EVKIGDHIIPQVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRKASGVLCDAKVPIKLK 234
Query: 490 GKFYRTAVR 516
GKFYRTAVR
Sbjct: 235 GKFYRTAVR 243
Score = 77.4 bits (189), Expect(2) = 1e-41
Identities = 39/51 (76%), Positives = 44/51 (86%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
IQE+A RCMLFAD VL+GESR+ELNERLETWRRALE +GF LSRS + YM
Sbjct: 112 IQEIAPRCMLFADDIVLLGESREELNERLETWRRALETHGFRLSRSKSEYM 162
Score = 66.6 bits (161), Expect = 2e-09
Identities = 63/205 (30%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLDVFNTFKS*HRDVCFLQMS*LESQG-- 176
SVRTQGG++DDF IT+GLH G TLSPY+FTL+LDV C L + G
Sbjct: 73 SVRTQGGESDDFPITIGLHQGSTLSPYLFTLILDVLTEQIQEIAPRCMLFADDIVLLGES 132
Query: 177 ----TN*MRGWRLGDEP*KTTAST*AEAVHSI*IMGCNFSKRQSISSFRGESRRSYHTTS 344
+ WR E S M C F+KR+ +S E + H
Sbjct: 133 REELNERLETWRRALETHGFRLSRSKSE-----YMECQFNKRRVSNS---EVKIGDHIIP 184
Query: 345 YTI*ISWVHXXXXXXXXXXXXPSN---SSWMV-EMEEGLMCFMGYKSTTQFEGKILSDSG 512
++ ++ + WM G++C K + +GK +
Sbjct: 185 QVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRKASGVLC--DAKVPIKLKGKFYRTA- 241
Query: 513 KTRLPMLYGT*GWAVRNQHENKLSV 587
R +LYGT WAV++QHENK+ V
Sbjct: 242 -VRPTILYGTECWAVKSQHENKVGV 265
>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
putative [Medicago truncatula]
Length = 195
Score = 124 bits (311), Expect(3) = 6e-41
Identities = 60/70 (85%), Positives = 63/70 (90%)
Frame = +1
Query: 307 LEVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNL 486
LEVKVGD IIPQVTRFKYLGS VQNDGEIE DV+H+IQAGWLKWRRAS VL D KVPL L
Sbjct: 66 LEVKVGDHIIPQVTRFKYLGSFVQNDGEIEADVSHRIQAGWLKWRRASGVLCDKKVPLKL 125
Query: 487 KGKFYRTAVR 516
KGKFYRTA+R
Sbjct: 126 KGKFYRTAIR 135
Score = 58.9 bits (141), Expect(3) = 6e-41
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 155 VLIGESRDELNERLETWRRALEDYGFHLSRSST*YMNY 268
VL+GESR+E+N RLETWR+ALE YGF LSRS T YM +
Sbjct: 18 VLVGESREEVNGRLETWRQALEAYGFRLSRSKTEYMEW 55
Score = 33.1 bits (74), Expect(3) = 6e-41
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 519 RLPMLYGT*GWAVRNQHENKLSV 587
R +LYGT WAV++QHEN++SV
Sbjct: 135 RPALLYGTECWAVKSQHENQVSV 157
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 102 bits (254), Expect(3) = 1e-39
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 9/97 (9%)
Frame = +1
Query: 307 LEVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNL 486
+EV++G+ I+ +V FKYLG I+Q++GEIE+DVNH+IQAGW KWR AS + D KVPL L
Sbjct: 340 IEVEIGENILRKVKSFKYLGCIIQDNGEIEQDVNHRIQAGWSKWRSASGFICDKKVPLKL 399
Query: 487 KGKFYRTAVR----QDCPCCMG-----HRVGLSETNM 570
KGKFYRTA+R CC H++ ++E M
Sbjct: 400 KGKFYRTAIRPAMLYGTECCAAKGEHEHKLSVAEVKM 436
Score = 60.1 bits (144), Expect(3) = 1e-39
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
HIQE C+LFAD VL+GE R++LN++LE W+ ALE YG +SRS T YM
Sbjct: 276 HIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEVYGLRISRSKTEYM 327
Score = 49.7 bits (117), Expect(3) = 1e-39
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLDV 107
SV+TQGG T++F I +GLH G +LSPY+FT+VL+V
Sbjct: 238 SVKTQGGVTEEFPIGIGLHQGSSLSPYLFTIVLEV 272
>gb|OIT39959.1| histone deacetylase 14 [Nicotiana attenuata]
Length = 763
Score = 87.8 bits (216), Expect(4) = 3e-36
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V++G ++IP+ FKYLGS++Q D EI DV H+I AGW+KWR AS VL D KVP LK
Sbjct: 232 DVRLGSQVIPKRDSFKYLGSMIQGDREINEDVTHRIGAGWMKWRLASGVLCDKKVPPILK 291
Query: 490 GKFYRTAVR 516
GKFYR VR
Sbjct: 292 GKFYRAVVR 300
Score = 60.5 bits (145), Expect(4) = 3e-36
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YMNY 268
HI+ CMLFAD VLI E+RD +NERLE WR+ LE GF LSRS T Y+ Y
Sbjct: 167 HIRGDVPWCMLFADDIVLIDETRDGVNERLEVWRQTLESKGFKLSRSKTEYLEY 220
Score = 45.4 bits (106), Expect(4) = 3e-36
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 6 VRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
VRT GGD++ F + MGLH G LSP++F LV+D
Sbjct: 130 VRTVGGDSEHFPVVMGLHQGSALSPFLFALVMD 162
Score = 26.9 bits (58), Expect(4) = 3e-36
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 519 RLPMLYGT*GWAVRNQHENKLSV 587
RL MLYG W V+N H ++ V
Sbjct: 300 RLAMLYGAECWPVKNSHIQRMKV 322
>gb|KYP77525.1| Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 366
Score = 108 bits (270), Expect(2) = 1e-35
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
EVK+GD + +VT FKYLG+I+QN+GEIE DVNH+IQAGW+KWR+AS V+ D KVPL LK
Sbjct: 164 EVKLGDHPMREVTSFKYLGTIIQNNGEIEEDVNHRIQAGWMKWRKASGVICDKKVPLKLK 223
Query: 490 GKFYRTAVR 516
GKFYRTA+R
Sbjct: 224 GKFYRTAIR 232
Score = 69.7 bits (169), Expect(2) = 1e-35
Identities = 32/52 (61%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
HIQE RCMLFAD VL+G+S++++NE+LE WR+ALE YGF +SRS T Y+
Sbjct: 99 HIQEAVPRCMLFADDIVLVGDSKEQVNEKLERWRQALETYGFRISRSKTEYI 150
>gb|PKA52309.1| integrator complex subunit 11 [Apostasia shenzhenica]
Length = 513
Score = 91.7 bits (226), Expect(3) = 6e-35
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V +GD+I+ + RF+YLGSI+QNDGEI+ DV +IQAGW+KWR AS VL D K+ +K
Sbjct: 311 DVTIGDQIVKKSERFRYLGSIIQNDGEIDNDVISRIQAGWVKWRNASGVLCDRKISSKIK 370
Query: 490 GKFYRTAVRQ 519
GKFY+ VRQ
Sbjct: 371 GKFYKNIVRQ 380
Score = 53.1 bits (126), Expect(3) = 6e-35
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
HIQ+ CMLFAD VLI ++++ +LE WR ALE G HLSRS T YM
Sbjct: 246 HIQDEVPWCMLFADDIVLIEKTKEGAKAKLELWRNALESKGLHLSRSKTEYM 297
Score = 51.2 bits (121), Expect(3) = 6e-35
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLDV 107
SVRTQGG T DF IT+GLH G +LSPY+F L+++V
Sbjct: 208 SVRTQGGLTKDFPITVGLHQGSSLSPYLFALIMEV 242
>gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 88.2 bits (217), Expect(4) = 8e-35
Identities = 37/69 (53%), Positives = 56/69 (81%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 815 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPHKLK 874
Query: 490 GKFYRTAVR 516
GKFYRTA+R
Sbjct: 875 GKFYRTAIR 883
Score = 52.4 bits (124), Expect(4) = 8e-35
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
IQ + CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 752 IQGVLPWCMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 802
Score = 51.2 bits (121), Expect(4) = 8e-35
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRT GDTDDF I +GLH G LSPY+F LV+D
Sbjct: 713 SVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 746
Score = 23.9 bits (50), Expect(4) = 8e-35
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 519 RLPMLYGT*GWAVRNQHENKLSV 587
R MLYG W+ + +H +LSV
Sbjct: 883 RPAMLYGAECWSTKRRHVQQLSV 905
>gb|PKA50244.1| hypothetical protein AXF42_Ash017838 [Apostasia shenzhenica]
Length = 609
Score = 91.3 bits (225), Expect(3) = 1e-34
Identities = 40/68 (58%), Positives = 54/68 (79%)
Frame = +1
Query: 313 VKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLKG 492
+++GD+I+ + RF+YLGSI+QNDGEI +V +IQAGW+KWR AS VL D K+P +KG
Sbjct: 284 IEIGDQIVKKSERFRYLGSIIQNDGEIVNNVISRIQAGWVKWRNASGVLCDRKIPSKIKG 343
Query: 493 KFYRTAVR 516
KFY+T VR
Sbjct: 344 KFYKTVVR 351
Score = 54.7 bits (130), Expect(3) = 1e-34
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 80 LYFYISFGCL*HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST 253
L+ I G HIQ+ CMLFAD VLI ++++ +LE WR ALE G HLSRS T
Sbjct: 210 LFALIMEGMTGHIQDEVPWCMLFADDIVLIEKTKEGAKAKLELWRNALESKGLHLSRSKT 269
Query: 254 *YM 262
YM
Sbjct: 270 EYM 272
Score = 49.3 bits (116), Expect(3) = 1e-34
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRTQGG T DF IT+GLH G LSPY+F L+++
Sbjct: 183 SVRTQGGLTKDFPITVGLHQGSALSPYLFALIME 216
>gb|PKA50536.1| ataxia telangiectasia mutated family protein [Apostasia
shenzhenica]
Length = 313
Score = 95.1 bits (235), Expect(3) = 1e-34
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V +GD+I+ + RF+YLGSI+QNDGEI+ DV +IQAGW+KWR AS VL D K+P +K
Sbjct: 111 DVTIGDQIVKKSERFRYLGSIIQNDGEIDNDVISRIQAGWVKWRNASGVLCDRKIPSKIK 170
Query: 490 GKFYRTAVR 516
GKFY+T VR
Sbjct: 171 GKFYKTVVR 179
Score = 53.1 bits (126), Expect(3) = 1e-34
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
HIQ+ CMLFAD VLI ++++ +LE WR ALE G HLSRS T YM
Sbjct: 46 HIQDEVPWCMLFADDIVLIEKTKEGAKAKLELWRNALESKGLHLSRSKTEYM 97
Score = 47.0 bits (110), Expect(3) = 1e-34
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLDV 107
SV TQGG T DF IT GLH G LSPY+F L+++V
Sbjct: 8 SVWTQGGLTKDFPITAGLHQGSALSPYLFALIMEV 42
>gb|AQK52011.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 557
Score = 88.2 bits (217), Expect(4) = 1e-34
Identities = 37/69 (53%), Positives = 56/69 (81%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 356 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPHKLK 415
Query: 490 GKFYRTAVR 516
GKFYRTA+R
Sbjct: 416 GKFYRTAIR 424
Score = 52.4 bits (124), Expect(4) = 1e-34
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
IQ + CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 293 IQGVLPWCMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 343
Score = 51.2 bits (121), Expect(4) = 1e-34
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRT GDTDDF I +GLH G LSPY+F LV+D
Sbjct: 254 SVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 287
Score = 23.1 bits (48), Expect(4) = 1e-34
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 519 RLPMLYGT*GWAVRNQHENKLSV 587
R MLYG W + +H +LSV
Sbjct: 424 RPAMLYGAECWPTKRRHVQQLSV 446
>gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 91.3 bits (225), Expect(3) = 1e-34
Identities = 38/69 (55%), Positives = 57/69 (82%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+AGWLKWR+A+ VL DT+VP LK
Sbjct: 815 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDTRVPRKLK 874
Query: 490 GKFYRTAVR 516
GKFYRTA+R
Sbjct: 875 GKFYRTAIR 883
Score = 52.4 bits (124), Expect(3) = 1e-34
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
IQ + CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 752 IQGVLPWCMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 802
Score = 51.2 bits (121), Expect(3) = 1e-34
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRT GDTDDF I +GLH G LSPY+F LV+D
Sbjct: 713 SVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 746
>gb|ONL97201.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 557
Score = 87.4 bits (215), Expect(4) = 2e-34
Identities = 36/69 (52%), Positives = 55/69 (79%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+ GWLKWR+A+ VL D +VP LK
Sbjct: 356 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKVGWLKWRQAAGVLCDPRVPRKLK 415
Query: 490 GKFYRTAVR 516
GKFYRTA+R
Sbjct: 416 GKFYRTAIR 424
Score = 52.4 bits (124), Expect(4) = 2e-34
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
IQ + CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 293 IQGVLPWCMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 343
Score = 51.2 bits (121), Expect(4) = 2e-34
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRT GDTDDF I +GLH G LSPY+F LV+D
Sbjct: 254 SVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 287
Score = 23.1 bits (48), Expect(4) = 2e-34
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 519 RLPMLYGT*GWAVRNQHENKLSV 587
R MLYG W + +H +LSV
Sbjct: 424 RPAMLYGAECWPTKRRHVQQLSV 446
>gb|AQK86945.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 90.1 bits (222), Expect(3) = 2e-34
Identities = 38/69 (55%), Positives = 56/69 (81%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 815 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 874
Query: 490 GKFYRTAVR 516
GKFYRTA+R
Sbjct: 875 GKFYRTAIR 883
Score = 52.8 bits (125), Expect(3) = 2e-34
Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +2
Query: 137 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
CMLFAD VLI ESR +++++LE WR+ LE GF LSRS T YM
Sbjct: 759 CMLFADDVVLIEESRSDVSQKLELWRQTLEAKGFRLSRSKTEYM 802
Score = 51.2 bits (121), Expect(3) = 2e-34
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRT GDTDDF I +GLH G LSPY+F LV+D
Sbjct: 713 SVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 746
>gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1038
Score = 89.0 bits (219), Expect(3) = 3e-34
Identities = 37/69 (53%), Positives = 56/69 (81%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 837 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 896
Query: 490 GKFYRTAVR 516
GKFY+TA+R
Sbjct: 897 GKFYKTAIR 905
Score = 53.1 bits (126), Expect(3) = 3e-34
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRT GDTDDF I +GLH G LSPY+FTLV+D
Sbjct: 735 SVRTSDGDTDDFPINIGLHQGSALSPYLFTLVID 768
Score = 51.6 bits (122), Expect(3) = 3e-34
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 137 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 781 CMLFADDVVLIEESRSGVSQKLELWRKTLEAKGFRLSRSKTEYM 824
>gb|AQK68857.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 557
Score = 87.0 bits (214), Expect(4) = 4e-34
Identities = 36/69 (52%), Positives = 56/69 (81%)
Frame = +1
Query: 310 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 489
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+AGWLKW++A+ VL D +VP LK
Sbjct: 356 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWQQAAGVLCDPRVPHKLK 415
Query: 490 GKFYRTAVR 516
GKFYRTA+R
Sbjct: 416 GKFYRTAIR 424
Score = 51.2 bits (121), Expect(4) = 4e-34
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3
Query: 3 SVRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLD 104
SVRT GDTDDF I +GLH G LSPY+F LV+D
Sbjct: 254 SVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 287
Score = 51.2 bits (121), Expect(4) = 4e-34
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 137 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 300 CMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 343
Score = 23.9 bits (50), Expect(4) = 4e-34
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 519 RLPMLYGT*GWAVRNQHENKLSV 587
R MLYG W+ + +H +LSV
Sbjct: 424 RPAMLYGAECWSTKRRHVQQLSV 446
>gb|PKU60047.1| ataxia telangiectasia mutated family protein [Dendrobium catenatum]
Length = 377
Score = 90.1 bits (222), Expect(4) = 4e-34
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = +1
Query: 313 VKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLKG 492
V +GD++I + TRF+YLGSIVQ+DGEI+ D+ +IQ GWLKWR AS +L D VPL LKG
Sbjct: 176 VTLGDQVINKSTRFRYLGSIVQSDGEIDGDIISRIQIGWLKWRNASGLLCDRNVPLKLKG 235
Query: 493 KFYRTAVR 516
KFY+ VR
Sbjct: 236 KFYKMVVR 243
Score = 50.8 bits (120), Expect(4) = 4e-34
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
H+QE CMLFAD +L+ ++R+ + +LE WR LE GF LSRS T YM
Sbjct: 111 HLQEDVPWCMLFADDILLVDKTREGVEGKLELWRSTLESKGFRLSRSKTEYM 162
Score = 46.6 bits (109), Expect(4) = 4e-34
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 6 VRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLDV 107
V+TQGG T F I++GLH G LSPY+FTLV+DV
Sbjct: 74 VQTQGGLTKYFPISVGLHQGSALSPYLFTLVMDV 107
Score = 25.8 bits (55), Expect(4) = 4e-34
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 519 RLPMLYGT*GWAVRNQHENKLSV 587
R MLYG W ++ +H KLSV
Sbjct: 243 RPAMLYGAECWPLKEKHNTKLSV 265
>gb|PKU64612.1| integrator complex subunit 11 [Dendrobium catenatum]
Length = 477
Score = 90.5 bits (223), Expect(4) = 5e-34
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = +1
Query: 313 VKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLKG 492
V +GD++I + TRF+YLGSIVQ+DGEI+ D+ +IQ GWLKWR AS +L D VPL LKG
Sbjct: 276 VTLGDQVINKSTRFRYLGSIVQSDGEIDGDIISRIQVGWLKWRNASGLLCDRNVPLKLKG 335
Query: 493 KFYRTAVR 516
KFY+ VR
Sbjct: 336 KFYKMVVR 343
Score = 49.7 bits (117), Expect(4) = 5e-34
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 262
H+Q+ CMLFAD +L+ ++R+ + +LE WR LE GF LSRS T YM
Sbjct: 211 HLQDDVPWCMLFADDILLVDKTREGVEGKLELWRSTLESKGFRLSRSKTEYM 262
Score = 44.7 bits (104), Expect(4) = 5e-34
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 6 VRTQGGDTDDFLITMGLHPGLTLSPYIFTLVLDV 107
V+TQGG T F I++GLH G LSPY+F LV+DV
Sbjct: 174 VQTQGGLTKYFPISVGLHQGSALSPYLFALVMDV 207
Score = 28.1 bits (61), Expect(4) = 5e-34
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 519 RLPMLYGT*GWAVRNQHENKLSV 587
R MLYG W ++ +H NKLSV
Sbjct: 343 RPAMLYGAECWPLKEKHNNKLSV 365