BLASTX nr result
ID: Astragalus24_contig00026003
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00026003
(432 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU27608.1| hypothetical protein TSUD_271490 [Trifolium subt... 120 5e-33
dbj|GAU18648.1| hypothetical protein TSUD_124810 [Trifolium subt... 112 7e-32
gb|PNY02556.1| ribonuclease H, partial [Trifolium pratense] 112 1e-31
dbj|GAU50750.1| hypothetical protein TSUD_410580 [Trifolium subt... 116 3e-31
gb|PNX92150.1| ribonuclease H [Trifolium pratense] 114 5e-31
dbj|GAU43361.1| hypothetical protein TSUD_82070 [Trifolium subte... 111 7e-31
dbj|GAU28660.1| hypothetical protein TSUD_159420 [Trifolium subt... 120 7e-31
dbj|GAU30290.1| hypothetical protein TSUD_385110 [Trifolium subt... 116 2e-30
dbj|GAU11804.1| hypothetical protein TSUD_75550 [Trifolium subte... 115 2e-30
gb|PNX80358.1| ribonuclease H, partial [Trifolium pratense] 110 3e-30
gb|PNY14675.1| ribonuclease H [Trifolium pratense] 112 1e-29
dbj|GAU34840.1| hypothetical protein TSUD_259200 [Trifolium subt... 108 1e-29
gb|PNX96237.1| ribonuclease H [Trifolium pratense] 111 2e-29
dbj|GAU30935.1| hypothetical protein TSUD_143830 [Trifolium subt... 109 2e-29
gb|PNX71244.1| ribonuclease H, partial [Trifolium pratense] 108 2e-29
gb|PNX95399.1| ribonuclease H, partial [Trifolium pratense] 112 2e-29
dbj|GAU25702.1| hypothetical protein TSUD_216310 [Trifolium subt... 107 3e-29
dbj|GAU45920.1| hypothetical protein TSUD_280610 [Trifolium subt... 111 3e-29
dbj|GAU21746.1| hypothetical protein TSUD_328710 [Trifolium subt... 121 4e-29
dbj|GAU46451.1| hypothetical protein TSUD_402180 [Trifolium subt... 121 4e-29
>dbj|GAU27608.1| hypothetical protein TSUD_271490 [Trifolium subterraneum]
Length = 1515
Score = 120 bits (302), Expect(2) = 5e-33
Identities = 58/88 (65%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 Y*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMSLFL 349
Y GLPSMIG SK A+F +IKDRIW+K+NS GR LSKAGKEVMI SVLQ+IP Y MS+F+
Sbjct: 1116 YLGLPSMIGRSKKAIFSYIKDRIWKKMNSWRGRALSKAGKEVMIKSVLQAIPSYVMSMFI 1175
Query: 350 IPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+PS+LI+DI++ +N FWWGG + +KGI
Sbjct: 1176 LPSSLIDDIEKMLNAFWWGGGSNNNKGI 1203
Score = 48.1 bits (113), Expect(2) = 5e-33
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSLGS*C------LFGHKKLLGS 180
F RA+ L +IL TYE ASGQ+INF KSE+FFSR+L + G + +LG+
Sbjct: 1054 FCRASVVEVNHLMNILHTYEIASGQEINFAKSEVFFSRNLSHAAKEDLASILGVRHVLGT 1113
Query: 181 SFY 189
Y
Sbjct: 1114 GIY 1116
>dbj|GAU18648.1| hypothetical protein TSUD_124810 [Trifolium subterraneum]
Length = 1742
Score = 112 bits (281), Expect(2) = 7e-32
Identities = 56/91 (61%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T NY GLPSMIG K +F FIKDR+W++INS GR LS+AGKE+MI SVLQ+IP Y MS
Sbjct: 1200 TGNYLGLPSMIGRKKKDVFAFIKDRVWKRINSWRGRALSRAGKEIMIKSVLQAIPTYIMS 1259
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
++L+P T+I DI+R +N FWWGG +KGI
Sbjct: 1260 VYLLPDTIIRDIERMMNSFWWGG-GANNKGI 1289
Score = 52.4 bits (124), Expect(2) = 7e-32
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
F RAT A QL IL TYE+ASGQ+IN KSE+FFSR+L
Sbjct: 1141 FCRATIAEANQLMQILKTYEEASGQEINLSKSEVFFSRNL 1180
>gb|PNY02556.1| ribonuclease H, partial [Trifolium pratense]
Length = 1024
Score = 112 bits (281), Expect(2) = 1e-31
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T Y GLPSM+G SK A F ++KDRIW++INS GR LSKAGKEVMI SVLQ+IP Y MS
Sbjct: 701 TGTYLGLPSMVGRSKKATFAYVKDRIWKRINSWRGRPLSKAGKEVMIKSVLQAIPSYVMS 760
Query: 341 LFLIPSTLIEDIQRI-NGFWWGGSNGTHKGI 430
++L+P T+I DI+R+ N FWWGG +KGI
Sbjct: 761 IYLLPETMIRDIERMFNSFWWGG-GAENKGI 790
Score = 51.2 bits (121), Expect(2) = 1e-31
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSLGS*CLFGHKKLLG 177
F R+ ATQL SIL TY++ASGQ+IN KSE+FFSR+L K++G
Sbjct: 642 FCRSNLQEATQLMSILKTYQEASGQEINMTKSEVFFSRNLSRAAQEDLSKIMG 694
>dbj|GAU50750.1| hypothetical protein TSUD_410580 [Trifolium subterraneum]
Length = 1499
Score = 116 bits (291), Expect(2) = 3e-31
Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T NY GLPSM+G SK A+F FIKDR+W+K+NS GR LSKAGKEVMI SVLQ+IP Y MS
Sbjct: 939 TGNYLGLPSMVGRSKKAIFSFIKDRMWKKMNSWRGRCLSKAGKEVMIKSVLQAIPSYIMS 998
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
++LIPST + +I+R +N FWWGG +KGI
Sbjct: 999 IYLIPSTTVGEIERLLNSFWWGGGT-NNKGI 1028
Score = 46.2 bits (108), Expect(2) = 3e-31
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSLGS*CLFGHKKLLG 177
F RA+ A L SIL TYE+ASGQ+IN KSE++ SR+L K+LG
Sbjct: 880 FCRASIAKANHLLSILRTYEEASGQQINLSKSEVYMSRNLSHAAQEDIAKVLG 932
>gb|PNX92150.1| ribonuclease H [Trifolium pratense]
Length = 682
Score = 114 bits (285), Expect(2) = 5e-31
Identities = 54/88 (61%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 Y*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMSLFL 349
Y GLPSM+G SK A+F +IKDRIW++INS GR LSKAGKEVMI SVLQ+IP Y MS+++
Sbjct: 311 YLGLPSMVGRSKKAVFSYIKDRIWKRINSWRGRALSKAGKEVMIKSVLQAIPAYVMSMYI 370
Query: 350 IPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+PS+ ++DI++ IN FWWGG N + I
Sbjct: 371 LPSSFVDDIEKMINAFWWGGGNSHGRSI 398
Score = 47.8 bits (112), Expect(2) = 5e-31
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSLGS*C------LFGHKKLLGS 180
F RA QL SIL TYE+ASGQ+IN KSE+F SR++ + G + LG+
Sbjct: 249 FCRANAAEVNQLLSILHTYEQASGQEINLSKSEVFISRNMSQAAQSDLAGILGVRHALGT 308
Query: 181 SFY 189
Y
Sbjct: 309 GVY 311
>dbj|GAU43361.1| hypothetical protein TSUD_82070 [Trifolium subterraneum]
Length = 985
Score = 111 bits (277), Expect(3) = 7e-31
Identities = 55/91 (60%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T Y GLPS+IG SK + F FIKDRIW+KINS + LSKAG+EV+I SVLQSIP YFMS
Sbjct: 491 TGKYLGLPSLIGRSKKSTFNFIKDRIWKKINSWSSKCLSKAGREVLIKSVLQSIPTYFMS 550
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+F +PS+L ++I++ +N FWWG S +KGI
Sbjct: 551 IFTLPSSLCDEIEKMLNAFWWGQSGTHNKGI 581
Score = 49.3 bits (116), Expect(3) = 7e-31
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
FFRA A +++IL TYE ASGQ INFQKSEIF SR++
Sbjct: 432 FFRANINEAMAMKNILATYEAASGQAINFQKSEIFCSRNV 471
Score = 21.6 bits (44), Expect(3) = 7e-31
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3
Query: 3 DDCFLFFQ 26
DDCFLFF+
Sbjct: 427 DDCFLFFR 434
>dbj|GAU28660.1| hypothetical protein TSUD_159420 [Trifolium subterraneum]
Length = 1424
Score = 120 bits (301), Expect(2) = 7e-31
Identities = 59/88 (67%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 Y*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMSLFL 349
Y GLPSMIG SK A+F +IKDRIW K+NS GR LSKAGKEVMI SVLQ+IP Y MSLF+
Sbjct: 946 YLGLPSMIGRSKKAIFSYIKDRIWNKMNSWRGRALSKAGKEVMIKSVLQAIPSYVMSLFI 1005
Query: 350 IPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+PS+LI+DI++ +N FWWGG + +KGI
Sbjct: 1006 LPSSLIDDIEKMLNSFWWGGGSHNNKGI 1033
Score = 41.2 bits (95), Expect(2) = 7e-31
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
F RA+ L IL TYE ASGQ+I KSE+FFSR+L
Sbjct: 884 FCRASVVEVNHLMKILHTYELASGQEIYLGKSEVFFSRNL 923
Score = 107 bits (268), Expect = 2e-24
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = +2
Query: 194 G*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMSLFLIPSTLIED 373
G SK A+F +IKDRIW K+NS GR LSKAGKEVMI SVLQ+IP Y MSLF++PS+LI+D
Sbjct: 1073 GRSKKAIFSYIKDRIWNKMNSWRGRALSKAGKEVMIKSVLQAIPSYVMSLFILPSSLIDD 1132
Query: 374 IQR-INGFWWGGSNGTHKGI 430
I++ +N FWWGG + +KGI
Sbjct: 1133 IEKMLNSFWWGGGSHNNKGI 1152
>dbj|GAU30290.1| hypothetical protein TSUD_385110 [Trifolium subterraneum]
Length = 1831
Score = 116 bits (291), Expect(2) = 2e-30
Identities = 60/91 (65%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T NY GLPSMIG SK +F FIKDRIW+KINS G +LSKAGKEVMI VLQ+IP Y MS
Sbjct: 1653 TGNYLGLPSMIGRSKKTIFSFIKDRIWKKINSWRGCSLSKAGKEVMIKFVLQAIPSYIMS 1712
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+++IPS++I DI+R +NGFWWGG + +KGI
Sbjct: 1713 IYIIPSSIITDIERMLNGFWWGGGD-QNKGI 1742
Score = 43.9 bits (102), Expect(2) = 2e-30
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
F RA+ + L SIL TYE ASGQ+IN KSE+F SR++
Sbjct: 1594 FCRASISETSHLLSILRTYEAASGQQINLTKSEVFISRNI 1633
>dbj|GAU11804.1| hypothetical protein TSUD_75550 [Trifolium subterraneum]
Length = 1178
Score = 115 bits (288), Expect(3) = 2e-30
Identities = 57/91 (62%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T Y GLPSMIG SK + FKFIKDRIW KINS R LS+AG+EVMI SVLQ+IP Y MS
Sbjct: 444 TGKYLGLPSMIGRSKKSTFKFIKDRIWRKINSWSSRHLSQAGREVMIKSVLQTIPAYVMS 503
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
FL+P+TLI+DI++ +N FWWG ++G+ +G+
Sbjct: 504 TFLLPNTLIDDIEKMLNSFWWGHTSGSARGL 534
Score = 43.5 bits (101), Expect(3) = 2e-30
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSLGS 144
FFRA A L++IL YE ASGQ IN QKSE + SR++ S
Sbjct: 385 FFRANVTEAAALKNILSIYEVASGQAINLQKSEFYCSRNVPS 426
Score = 21.6 bits (44), Expect(3) = 2e-30
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3
Query: 3 DDCFLFFQ 26
DDCFLFF+
Sbjct: 380 DDCFLFFR 387
>gb|PNX80358.1| ribonuclease H, partial [Trifolium pratense]
Length = 700
Score = 110 bits (275), Expect(2) = 3e-30
Identities = 55/91 (60%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T NY GLPSMIG K +F ++KDRIW++INS GR LSKAGKEVMI SVLQ+IP Y MS
Sbjct: 596 TGNYLGLPSMIGRKKKEVFAYLKDRIWKRINSWRGRALSKAGKEVMIKSVLQAIPSYVMS 655
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
++L+P + ++DI+R +N FWWGG +KGI
Sbjct: 656 VYLLPESTVKDIERMLNSFWWGG-GANNKGI 685
Score = 49.3 bits (116), Expect(2) = 3e-30
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
F RAT L IL+TYE+ASGQ+IN KSE+FFSR+L
Sbjct: 537 FCRATLDETNHLMKILNTYEEASGQEINLTKSEVFFSRNL 576
>gb|PNY14675.1| ribonuclease H [Trifolium pratense]
Length = 1293
Score = 112 bits (279), Expect(2) = 1e-29
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T NY GLPSMIG K +F FIKDRIW++INS GR LS+AGKEVMI SVLQ+IP Y MS
Sbjct: 704 TGNYLGLPSMIGRKKKHIFAFIKDRIWKRINSWRGRALSRAGKEVMIKSVLQAIPAYVMS 763
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
++L+P +I+DI+R +N FWWGG +KGI
Sbjct: 764 VYLLPDAIIKDIERMMNSFWWGGGT-NNKGI 793
Score = 45.8 bits (107), Expect(2) = 1e-29
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
F R+T QL IL TY +ASGQ+IN KSE+FFSR+L
Sbjct: 645 FCRSTVAETEQLMRILKTYGEASGQEINLTKSEVFFSRNL 684
>dbj|GAU34840.1| hypothetical protein TSUD_259200 [Trifolium subterraneum]
Length = 1122
Score = 108 bits (269), Expect(2) = 1e-29
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T Y GLPSM+G K F ++KDRIW+KINS GR LSKAGKEVMI SVLQ+IP Y MS
Sbjct: 621 TGKYLGLPSMVGRKKKETFGYVKDRIWKKINSWRGRALSKAGKEVMIKSVLQAIPSYVMS 680
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTH 421
++LIP T I++I+R +N FWWGG G+H
Sbjct: 681 VYLIPETTIKEIERMMNSFWWGG--GSH 706
Score = 49.7 bits (117), Expect(2) = 1e-29
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
F RA QL++IL TYE+ASGQ+IN KSE+FFSR+L
Sbjct: 562 FCRANAEEVNQLKTILKTYEEASGQEINMSKSEVFFSRNL 601
>gb|PNX96237.1| ribonuclease H [Trifolium pratense]
Length = 1283
Score = 111 bits (277), Expect(2) = 2e-29
Identities = 55/91 (60%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T NY GLPSMIG K +F +IKDR+W++INS GR+LS+AGKEVMI SVLQ+IP Y MS
Sbjct: 1060 TGNYLGLPSMIGRKKKDVFAYIKDRVWKRINSWKGRSLSRAGKEVMIKSVLQAIPSYVMS 1119
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
++L+P ++I+DI+R +N FWWGG +KGI
Sbjct: 1120 IYLLPDSIIKDIERMMNSFWWGG-GANNKGI 1149
Score = 45.8 bits (107), Expect(2) = 2e-29
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
F R+T L SIL TY +ASGQ+IN KSE+FFSR+L
Sbjct: 1001 FCRSTIEETNHLMSILKTYGEASGQEINLSKSEVFFSRNL 1040
>dbj|GAU30935.1| hypothetical protein TSUD_143830 [Trifolium subterraneum]
Length = 671
Score = 109 bits (272), Expect(2) = 2e-29
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 Y*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMSLFL 349
Y GLPSMIG SK A+F +IK RIW+K+NS GR LSKA KEVMI VLQ+IP Y MS+F+
Sbjct: 144 YLGLPSMIGRSKKAIFSYIKYRIWKKMNSWRGRALSKAEKEVMIKYVLQAIPSYVMSMFI 203
Query: 350 IPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+PS+LI+DI++ +N FWWG + +KGI
Sbjct: 204 LPSSLIDDIEKMLNAFWWGDGSNNNKGI 231
Score = 47.8 bits (112), Expect(2) = 2e-29
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSLGS------*CLFGHKKLLGS 180
F RA+ G L +IL TYE ASGQ+IN SE+FFSR+L + G + +LG+
Sbjct: 82 FCRASAGEVNHLMNILHTYELASGQEINLAMSEVFFSRNLSHATKENLVSILGVRHVLGT 141
Query: 181 SFY 189
Y
Sbjct: 142 GIY 144
>gb|PNX71244.1| ribonuclease H, partial [Trifolium pratense]
Length = 917
Score = 108 bits (271), Expect(2) = 2e-29
Identities = 54/91 (59%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T NY GLPSM+G K +F F+KDRIW++IN+ GR+LS+AGKEVMI SVLQ+IP Y MS
Sbjct: 306 TGNYLGLPSMVGRKKKHIFAFLKDRIWKRINAWRGRSLSRAGKEVMIKSVLQAIPSYVMS 365
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
++L+P +I+DI+R +N FWWGG +KGI
Sbjct: 366 VYLLPDGVIKDIERMMNSFWWGG-GANNKGI 395
Score = 47.8 bits (112), Expect(2) = 2e-29
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSLGS 144
F RAT L IL TYE+ASGQ+IN KSE+FFSR+L +
Sbjct: 247 FCRATVAETELLMKILKTYEEASGQEINLAKSEVFFSRNLSA 288
>gb|PNX95399.1| ribonuclease H, partial [Trifolium pratense]
Length = 365
Score = 112 bits (281), Expect(2) = 2e-29
Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T Y GLPSMIG SK F +IKDRIW++INS GR LSKAGKEVMI SVLQ+IP Y MS
Sbjct: 147 TGTYLGLPSMIGRSKKNTFSYIKDRIWKRINSWRGRALSKAGKEVMIKSVLQAIPSYVMS 206
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+F++PS+ I DI++ +N FWWGG +GI
Sbjct: 207 MFILPSSFIGDIEKMLNAFWWGGGGNNGRGI 237
Score = 43.9 bits (102), Expect(2) = 2e-29
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
F RA QL IL TYE+ASGQ+IN KSE+F SR++
Sbjct: 88 FCRANVTEVNQLLRILHTYEQASGQEINLSKSEVFISRNI 127
>dbj|GAU25702.1| hypothetical protein TSUD_216310 [Trifolium subterraneum]
Length = 1869
Score = 107 bits (268), Expect(3) = 3e-29
Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T Y LPSMIG SK + FKFIKDRIW K+NS R LS+AG+EVMI S+LQSIP Y MS
Sbjct: 1442 TGKYLSLPSMIGMSKKSTFKFIKDRIWRKVNSWSSRHLSQAGREVMIKSILQSIPTYVMS 1501
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+FL+PSTL ++I++ IN WWG + ++G+
Sbjct: 1502 VFLLPSTLNDEIEKMINSLWWGHNGNNNRGL 1532
Score = 47.4 bits (111), Expect(3) = 3e-29
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSL 138
FF+AT AT L++ILD YE ASGQ IN QKSE + +R++
Sbjct: 1383 FFKATINEATVLKNILDVYEVASGQAINLQKSEFYCNRNV 1422
Score = 21.6 bits (44), Expect(3) = 3e-29
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3
Query: 3 DDCFLFFQ 26
DDCFLFF+
Sbjct: 1378 DDCFLFFK 1385
>dbj|GAU45920.1| hypothetical protein TSUD_280610 [Trifolium subterraneum]
Length = 1487
Score = 111 bits (278), Expect(3) = 3e-29
Identities = 55/90 (61%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
Frame = +2
Query: 170 Y*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMSLFL 349
Y GLPSM+G SK A+F +IKD IW++INS GR LSKAGKE+MI SVLQ+IP Y MS+F+
Sbjct: 992 YLGLPSMVGISKKAIFSYIKDHIWKRINSWRGRALSKAGKEIMIKSVLQAIPSYVMSMFI 1051
Query: 350 IPSTLIEDIQR-INGFWW--GGSNGTHKGI 430
+P++LI+DI++ IN FWW G +N KGI
Sbjct: 1052 LPASLIDDIEKMINAFWWRGGSTNNNTKGI 1081
Score = 44.3 bits (103), Expect(3) = 3e-29
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 19 FFRATRGGATQLQSILDTYEKASGQKINFQKSEIFFSRSLGS*CLFGHKKLLG 177
F+RA +L IL TYE ASGQ++N KS++F SR++ ++LG
Sbjct: 930 FYRANVAEVNELMRILHTYETASGQEVNLVKSKVFISRNMSQAAKEDRSRILG 982
Score = 20.4 bits (41), Expect(3) = 3e-29
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +3
Query: 3 DDCFLFFQ 26
DDCFLF++
Sbjct: 925 DDCFLFYR 932
>dbj|GAU21746.1| hypothetical protein TSUD_328710 [Trifolium subterraneum]
Length = 618
Score = 121 bits (303), Expect = 4e-29
Identities = 60/91 (65%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T Y GLPSMIG SK A+F +IKDRIW+K+NS GR LSKAGKEVMI SVLQ+IP Y MS
Sbjct: 28 TMIYLGLPSMIGRSKKAIFSYIKDRIWKKMNSWRGRALSKAGKEVMIKSVLQAIPSYVMS 87
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
LF++PS+LI+DI++ +N FWWGG + +KGI
Sbjct: 88 LFILPSSLIDDIEKMLNAFWWGGGSHNNKGI 118
>dbj|GAU46451.1| hypothetical protein TSUD_402180 [Trifolium subterraneum]
Length = 665
Score = 121 bits (303), Expect = 4e-29
Identities = 59/91 (64%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Frame = +2
Query: 161 TRNY*GLPSMIG*SKAALFKFIKDRIWEKINS*GGRTLSKAGKEVMIISVLQSIPMYFMS 340
T Y GLPSMIG SK A+F +IKDRIW+K+NS GR LSKAGKEVMI SVLQ+IP Y MS
Sbjct: 226 TSIYLGLPSMIGRSKKAIFSYIKDRIWKKMNSWRGRALSKAGKEVMIKSVLQAIPSYVMS 285
Query: 341 LFLIPSTLIEDIQR-INGFWWGGSNGTHKGI 430
+F++PS+LI+DI++ +N FWWGG + +KGI
Sbjct: 286 MFILPSSLIDDIEKMLNAFWWGGGSNNNKGI 316