BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00025509
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX55968.1| retrovirus-related Pol polyprotein from transposo...   133   2e-37
gb|PNX70614.1| retrovirus-related Pol polyprotein from transposo...   135   2e-37
gb|PNX69182.1| retrovirus-related Pol polyprotein from transposo...   131   1e-36
gb|PNX91298.1| retrovirus-related Pol polyprotein from transposo...   131   5e-36
gb|PNX91605.1| retrovirus-related Pol polyprotein from transposo...   129   8e-36
gb|PNX58201.1| retrovirus-related Pol polyprotein from transposo...   129   9e-36
gb|PNX68473.1| retrovirus-related Pol polyprotein from transposo...   132   2e-35
gb|PNX61578.1| retrovirus-related Pol polyprotein from transposo...   127   5e-35
gb|KHN26788.1| Retrovirus-related Pol polyprotein from transposo...   133   8e-35
gb|PNX78905.1| retrovirus-related Pol polyprotein from transposo...   127   9e-35
gb|PNX63508.1| retrovirus-related Pol polyprotein from transposo...   131   1e-34
gb|PNX72744.1| retrovirus-related Pol polyprotein from transposo...   129   2e-34
dbj|GAU38995.1| hypothetical protein TSUD_378710 [Trifolium subt...   130   3e-34
gb|PNX61962.1| retrovirus-related Pol polyprotein from transposo...   125   4e-34
gb|PNY00931.1| retrovirus-related Pol polyprotein from transposo...   130   4e-34
gb|PNX56895.1| retrovirus-related Pol polyprotein from transposo...   125   5e-34
gb|PNX58256.1| retrovirus-related Pol polyprotein from transposo...   125   6e-34
dbj|GAU35792.1| hypothetical protein TSUD_56690 [Trifolium subte...   132   9e-33
gb|PNX83385.1| retrovirus-related Pol polyprotein from transposo...   125   1e-32
dbj|GAU18821.1| hypothetical protein TSUD_228110 [Trifolium subt...   132   1e-32

>gb|PNX55968.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 110

 Score =  133 bits (335), Expect = 2e-37
 Identities = 58/93 (62%), Positives = 75/93 (80%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIPKFDGH++HW++LME LLRSKEYW+ +  G+   PA AT DQ++   ++K KDL
Sbjct: 7   YLQPSIPKFDGHYDHWSMLMENLLRSKEYWSXIEDGVIVAPAGATQDQIQAANESKLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ I+R I+ETI+   TTKEIWD+M+Q
Sbjct: 67  KAKNYLFQEIDRSILETILNRGTTKEIWDSMRQ 99


>gb|PNX70614.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 161

 Score =  135 bits (339), Expect = 2e-37
 Identities = 63/95 (66%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATP--DQLKIIEDAKHK 308
           F+QP+IP+FDGH++HW++LME LLRSKEYWT+V SGIPT  A   P   QLK IE+AK K
Sbjct: 8   FVQPAIPRFDGHYDHWSMLMENLLRSKEYWTLVESGIPTVEAGVQPTEQQLKGIEEAKLK 67

Query: 309 DLKAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           DLKAKNYLFQ+I+R I+ETI+  +T+K+IWD+MKQ
Sbjct: 68  DLKAKNYLFQAIDRNIMETILNRDTSKDIWDSMKQ 102


>gb|PNX69182.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 118

 Score =  131 bits (330), Expect = 1e-36
 Identities = 57/93 (61%), Positives = 78/93 (83%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           ++QPSIP+FDG ++HWA+LME LLRSKE+W ++ +G+   PANAT +QLK  ED++ KDL
Sbjct: 7   YMQPSIPRFDGFYDHWAMLMENLLRSKEFWDLIENGVTIAPANATQEQLKAAEDSRLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+I+R I+ETI+  +T KEIWD+M+Q
Sbjct: 67  KAKNYLFQAIDRTILETILSKDTPKEIWDSMRQ 99


>gb|PNX91298.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 165

 Score =  131 bits (330), Expect = 5e-36
 Identities = 57/93 (61%), Positives = 76/93 (81%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIPKFDGH++HW++LME LLRSKEYW+++  G+   PA A+ DQ++   ++K KDL
Sbjct: 7   YLQPSIPKFDGHYDHWSMLMENLLRSKEYWSLIEDGVIVAPAGASQDQIQAANESKLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+IER I+ETI+   T KEIWD+M+Q
Sbjct: 67  KAKNYLFQAIERSILETILTRGTXKEIWDSMRQ 99


>gb|PNX91605.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 110

 Score =  129 bits (324), Expect = 8e-36
 Identities = 55/93 (59%), Positives = 74/93 (79%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIPKFD H++HW++LME +LRSKEYW+++  G+   P  AT DQ++   ++K KDL
Sbjct: 7   YLQPSIPKFDSHYDHWSMLMENMLRSKEYWSLIEDGVIVAPEGATQDQIQAANESKLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ I+R I+ETI+   TTKEIWD+M+Q
Sbjct: 67  KAKNYLFQEIDRSILETILNRGTTKEIWDSMRQ 99


>gb|PNX58201.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 124

 Score =  129 bits (325), Expect = 9e-36
 Identities = 54/93 (58%), Positives = 77/93 (82%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIP+FDGH++HW++LME LLRSKEYW ++  G+   PA A+ +Q+++  ++K KDL
Sbjct: 7   YLQPSIPRFDGHYDHWSMLMENLLRSKEYWNLIEDGVMVAPAGASQEQIQLAHESKLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+I+R I+ETI+   T+KEIWD+M+Q
Sbjct: 67  KAKNYLFQAIDRSILETILARGTSKEIWDSMRQ 99


>gb|PNX68473.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 233

 Score =  132 bits (331), Expect = 2e-35
 Identities = 57/93 (61%), Positives = 76/93 (81%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIPKFDGH++HW++LME LLRSKEYW+++  G+   PA A+ DQ++   ++K KDL
Sbjct: 7   YLQPSIPKFDGHYDHWSMLMENLLRSKEYWSLIEDGVIVAPAGASQDQIQAANESKLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+IER I+ETI+   T KEIWD+M+Q
Sbjct: 67  KAKNYLFQAIERSILETILTRGTAKEIWDSMRQ 99


>gb|PNX61578.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 98

 Score =  127 bits (318), Expect = 5e-35
 Identities = 54/93 (58%), Positives = 77/93 (82%)
 Frame = +3

Query: 132 EFLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKD 311
           +FL+PSIPKFDG+++HWA+LME LLRSKEYW+++ +G+   PANAT +Q +I  ++K  D
Sbjct: 6   DFLKPSIPKFDGYYDHWAMLMENLLRSKEYWSLIENGVTVAPANATVEQQRIANESKLTD 65

Query: 312 LKAKNYLFQSIERGIIETIMETNTTKEIWDAMK 410
           LK KNYLFQSI+R I+ETI+  +T ++IW+AM+
Sbjct: 66  LKVKNYLFQSIDRSILETILNRDTARDIWNAMR 98


>gb|KHN26788.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 341

 Score =  133 bits (335), Expect = 8e-35
 Identities = 58/98 (59%), Positives = 78/98 (79%)
 Frame = +3

Query: 120 MVKREFLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDA 299
           M +  FLQPSIPKFDGH++HW++LME LLRSKEYW+++  GI   PAN+T +Q K  +D+
Sbjct: 2   MAESSFLQPSIPKFDGHYDHWSMLMENLLRSKEYWSIIEDGIVVAPANSTAEQSKAADDS 61

Query: 300 KHKDLKAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           K KDLKAKNYLFQ+I+R I+ETI+   T ++IW +M+Q
Sbjct: 62  KLKDLKAKNYLFQAIDRTILETILNKETARDIWTSMRQ 99


>gb|PNX78905.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 119

 Score =  127 bits (318), Expect = 9e-35
 Identities = 54/93 (58%), Positives = 76/93 (81%)
 Frame = +3

Query: 132 EFLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKD 311
           +FL+PSIPKFDG ++HWA+LME LLRSKEYW+++ +G+   PANATPDQ++    +K  D
Sbjct: 6   DFLKPSIPKFDGFYDHWAMLMENLLRSKEYWSLIENGVTIAPANATPDQVQAANASKIMD 65

Query: 312 LKAKNYLFQSIERGIIETIMETNTTKEIWDAMK 410
           +K KNYLFQSI+R I+ETI+  +T K+IW++M+
Sbjct: 66  MKVKNYLFQSIDRAILETILAKDTAKDIWESMR 98


>gb|PNX63508.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 285

 Score =  131 bits (330), Expect = 1e-34
 Identities = 57/93 (61%), Positives = 76/93 (81%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIPKFDGH++HW++LME LLRSKEYW+++  G+   PA A+ DQ++   ++K KDL
Sbjct: 7   YLQPSIPKFDGHYDHWSMLMENLLRSKEYWSLIEDGVIVAPAGASQDQIQAANESKLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+IER I+ETI+   T KEIWD+M+Q
Sbjct: 67  KAKNYLFQAIERSILETILTRGTXKEIWDSMRQ 99


>gb|PNX72744.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 224

 Score =  129 bits (325), Expect = 2e-34
 Identities = 56/92 (60%), Positives = 75/92 (81%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           F+QPSIPKFDG ++HWA LME L+RSKEYW+++  G+   PANATP Q++   ++K K L
Sbjct: 7   FMQPSIPKFDGFYDHWAELMENLIRSKEYWSLIEDGVVVAPANATPPQIQAANESKLKGL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMK 410
           K KNYLFQSI+R I+ETI+E NT+K+IWD+M+
Sbjct: 67  KVKNYLFQSIDRSILETILERNTSKQIWDSMR 98


>dbj|GAU38995.1| hypothetical protein TSUD_378710 [Trifolium subterraneum]
          Length = 281

 Score =  130 bits (327), Expect = 3e-34
 Identities = 62/93 (66%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = +3

Query: 138 LQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPA-NATPDQLKIIEDAKHKDL 314
           +QPSI KFDGH+ HWA+LMEKLLRSKEYW  +  GI T PA  AT +Q K+ E++K KDL
Sbjct: 8   MQPSISKFDGHYEHWAMLMEKLLRSKEYWNQIEVGIITAPAVGATQEQQKLAEESKLKDL 67

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+I+R I+ETI+  NTTKEIWD+M+Q
Sbjct: 68  KAKNYLFQAIDRTILETILTRNTTKEIWDSMRQ 100


>gb|PNX61962.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 108

 Score =  125 bits (313), Expect = 4e-34
 Identities = 55/89 (61%), Positives = 74/89 (83%)
 Frame = +3

Query: 147 SIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDLKAKN 326
           SIP+FDG ++HWA+LME LLRSKE+W ++ +G+   PANAT +QLK  ED++ KDLKAKN
Sbjct: 1   SIPRFDGFYDHWAMLMENLLRSKEFWDLIENGVTIAPANATQEQLKAAEDSRLKDLKAKN 60

Query: 327 YLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           YLFQ+I+R I+ETI+  +T KEIWD+M+Q
Sbjct: 61  YLFQAIDRTILETILSKDTPKEIWDSMRQ 89


>gb|PNY00931.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 295

 Score =  130 bits (327), Expect = 4e-34
 Identities = 56/93 (60%), Positives = 77/93 (82%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           ++QPSIP+FDG ++HW +LME LLRSKE+W ++ +G+   PANAT +QLK  ED++ KDL
Sbjct: 7   YMQPSIPRFDGFYDHWVMLMENLLRSKEFWDLIENGVTVAPANATHEQLKAAEDSRLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+I+R I+ETI+  +T KEIWD+M+Q
Sbjct: 67  KAKNYLFQAIDRTILETILSKDTAKEIWDSMRQ 99


>gb|PNX56895.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 131

 Score =  125 bits (314), Expect = 5e-34
 Identities = 53/93 (56%), Positives = 75/93 (80%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIP+FDGH++HW++LME LLRSKEYW ++  G+   PA A+ +Q+++  ++K K L
Sbjct: 7   YLQPSIPRFDGHYDHWSMLMENLLRSKEYWNLIEDGVVVAPAGASQEQIQLAHESKLKYL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+I+R I+E I+   TTKEIWD+M+Q
Sbjct: 67  KAKNYLFQAIDRSILEMILARGTTKEIWDSMRQ 99


>gb|PNX58256.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
 gb|PNX88118.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 139

 Score =  125 bits (314), Expect = 6e-34
 Identities = 53/93 (56%), Positives = 75/93 (80%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIP+FDGH++HW++LME LLRSKEYW ++  G+   PA A+ +Q+++  ++K K L
Sbjct: 7   YLQPSIPRFDGHYDHWSMLMENLLRSKEYWNLIEDGVVVAPAGASQEQIQLAHESKLKYL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+I+R I+E I+   TTKEIWD+M+Q
Sbjct: 67  KAKNYLFQAIDRSILEMILARGTTKEIWDSMRQ 99


>dbj|GAU35792.1| hypothetical protein TSUD_56690 [Trifolium subterraneum]
          Length = 617

 Score =  132 bits (331), Expect = 9e-33
 Identities = 63/133 (47%), Positives = 90/133 (67%), Gaps = 3/133 (2%)
 Frame = +3

Query: 24  REKLSKERSKC*GRT*RSQSIRIHNKCMQ---SKIMVKREFLQPSIPKFDGHFNHWALLM 194
           R  LS  RSK            +H  C+    + +     F+QPSIP+FDGH++HWA+LM
Sbjct: 297 RSSLSNNRSK------------LHKVCVFFACASMAESSNFMQPSIPRFDGHYDHWAMLM 344

Query: 195 EKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDLKAKNYLFQSIERGIIETIME 374
           E LLRSKEYW+++  GI T PA A  +QLK+ ++++ KDLK KN+LFQ+++R I+E I+ 
Sbjct: 345 ENLLRSKEYWSLIEEGIVTAPAGAMLEQLKVADESRLKDLKVKNFLFQAVDRTILEIILT 404

Query: 375 TNTTKEIWDAMKQ 413
            NTTK+IWD+M+Q
Sbjct: 405 RNTTKQIWDSMRQ 417


>gb|PNX83385.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 237

 Score =  125 bits (314), Expect = 1e-32
 Identities = 53/93 (56%), Positives = 75/93 (80%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           +LQPSIP+FDGH++HW++LME LLRSKEYW ++  G+   PA A+ +Q+++  ++K K L
Sbjct: 7   YLQPSIPRFDGHYDHWSMLMENLLRSKEYWNLIEDGVVVAPAGASQEQIQLAHESKLKYL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+I+R I+E I+   TTKEIWD+M+Q
Sbjct: 67  KAKNYLFQAIDRSILEMILARGTTKEIWDSMRQ 99


>dbj|GAU18821.1| hypothetical protein TSUD_228110 [Trifolium subterraneum]
          Length = 1013

 Score =  132 bits (332), Expect = 1e-32
 Identities = 59/93 (63%), Positives = 76/93 (81%)
 Frame = +3

Query: 135 FLQPSIPKFDGHFNHWALLMEKLLRSKEYWTVVVSGIPTPPANATPDQLKIIEDAKHKDL 314
           F  PSIPKFDG+++HWA+LME LLRSKEYW+++  GI   P  AT +QLK +E++K KDL
Sbjct: 7   FAPPSIPKFDGYYDHWAMLMENLLRSKEYWSLIEHGIVIAPEGATQEQLKAMEESKLKDL 66

Query: 315 KAKNYLFQSIERGIIETIMETNTTKEIWDAMKQ 413
           KAKNYLFQ+I+R I+ETI+  NT KEIWD+M+Q
Sbjct: 67  KAKNYLFQAIDRSILETILSRNTAKEIWDSMRQ 99