BLASTX nr result

ID: Astragalus24_contig00025463 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00025463
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74273.1| hypothetical protein M569_00483, partial [Genlise...    67   2e-12
gb|AMY59167.1| photosystem II protein L (chloroplast) [Morus alb...    60   1e-09
ref|YP_009252607.1| photosystem II protein L (chloroplast) [Ioch...    55   9e-08
ref|YP_009341792.1| photosystem II protein L (chloroplast) [Cast...    50   5e-06
ref|YP_398878.1| hypothetical protein NitoCp045 [Nicotiana tomen...    51   7e-06
ref|YP_004891619.1| unnamed protein product (chloroplast) [Nicot...    51   7e-06
gb|EFH63110.1| hypothetical protein ARALYDRAFT_893949 [Arabidops...    51   7e-06

>gb|EPS74273.1| hypothetical protein M569_00483, partial [Genlisea aurea]
          Length = 81

 Score = 67.4 bits (163), Expect = 2e-12
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 176 SGING*YYWKDSSLDNRYCSWYCCDRFNWYFLLW 277
           SGING +YWKDSSLDNRYC+WY CD  N YFLLW
Sbjct: 1   SGINGRHYWKDSSLDNRYCNWYSCDWLNRYFLLW 34


>gb|AMY59167.1| photosystem II protein L (chloroplast) [Morus alba var.
           multicaulis]
 gb|ANE10856.1| photosystem II protein L (chloroplast) [Morus alba var.
           atropurpurea]
          Length = 61

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
 Frame = +3

Query: 3   THFCTCCFIFKLFLQLIEEK----GIVY*EFSYPHSEGYHFKIIYDCL 134
           THFCTCCFIF+LFLQL +EK      +  E    HSEGYH  IIY CL
Sbjct: 12  THFCTCCFIFQLFLQLTKEKRRLLNKIIVEILLSHSEGYHLIIIYGCL 59


>ref|YP_009252607.1| photosystem II protein L (chloroplast) [Iochroma lehmannii]
 gb|ANA56701.1| photosystem II protein L (chloroplast) [Iochroma lehmannii]
          Length = 48

 Score = 54.7 bits (130), Expect = 9e-08
 Identities = 27/44 (61%), Positives = 31/44 (70%)
 Frame = +3

Query: 3   THFCTCCFIFKLFLQLIEEKGIVY*EFSYPHSEGYHFKIIYDCL 134
           THFCTCCFIF+LFLQL + K I   +    HSEG H  II+DCL
Sbjct: 5   THFCTCCFIFQLFLQLRKRKRIN--KILLAHSEGSHNLIIHDCL 46


>ref|YP_009341792.1| photosystem II protein L (chloroplast) [Castanopsis concinna]
 gb|ALN96556.1| photosystem II protein L (chloroplast) [Castanopsis concinna]
          Length = 53

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 29/44 (65%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
 Frame = +2

Query: 2   YSFLYLLFYFQIISSINRRKGNSIL---GILLSPFGRISFQNYL 124
           YSFLYLLFYF IISSI R K NS        L PFGRIS+ NYL
Sbjct: 10  YSFLYLLFYFPIISSIKRSKENSKQQNNRNSLIPFGRISYHNYL 53


>ref|YP_398878.1| hypothetical protein NitoCp045 [Nicotiana tomentosiformis]
 dbj|BAE48016.1| hypothetical protein (chloroplast) [Nicotiana tomentosiformis]
          Length = 99

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 29/53 (54%), Positives = 30/53 (56%)
 Frame = -3

Query: 357 PVEFLCFHFAN*NHPTTTGMIPIRNTNHKRKXXXXXXXXXXXXXXLSKEESFQ 199
           PVEFL FH  +  H  TTGM PIRN NHKRK              LSKEESFQ
Sbjct: 47  PVEFLRFHVDDSIHSITTGMNPIRNMNHKRKYLLNRLQEYQLQYLLSKEESFQ 99


>ref|YP_004891619.1| unnamed protein product (chloroplast) [Nicotiana undulata]
 gb|AEO95578.1| hypothetical protein (chloroplast) [Nicotiana undulata]
 gb|AEO95688.1| hypothetical protein [synthetic construct]
          Length = 99

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 29/53 (54%), Positives = 30/53 (56%)
 Frame = -3

Query: 357 PVEFLCFHFAN*NHPTTTGMIPIRNTNHKRKXXXXXXXXXXXXXXLSKEESFQ 199
           PVEFL FH  +  H  TTGM PIRN NHKRK              LSKEESFQ
Sbjct: 47  PVEFLRFHVDDSIHSITTGMNPIRNMNHKRKYLLNRLQEYQLQYLLSKEESFQ 99


>gb|EFH63110.1| hypothetical protein ARALYDRAFT_893949 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 85

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +2

Query: 209 SSLDNRYCSWYCCDRFNWYFLLW 277
           SSL NRYCSWY CDRFN YFLLW
Sbjct: 50  SSLGNRYCSWYSCDRFNRYFLLW 72


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