BLASTX nr result

ID: Astragalus24_contig00025351 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00025351
         (604 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP60062.1| E3 ubiquitin-protein ligase complex slx8-rfp subu...    68   1e-10
ref|XP_020224086.1| E3 ubiquitin-protein ligase complex slx8-rfp...    67   2e-10
ref|XP_020224085.1| E3 ubiquitin-protein ligase complex slx8-rfp...    67   3e-10

>gb|KYP60062.1| E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 [Cajanus
           cajan]
          Length = 187

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 54/150 (36%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
 Frame = -3

Query: 440 MSSRTDRSNRRRKMSLELDLNXXXXXXXXXXXXXXXXPD---VLIPMIDVDTSDDDIIET 270
           MSSRT RS RRRKM+LELDLN                       +PMIDV+  DDD++E+
Sbjct: 1   MSSRTARSTRRRKMNLELDLNRDPPAENVREEEEGPSTQHQQQQLPMIDVEAIDDDVVES 60

Query: 269 SPRSFQEATXXXXXXXXXXNPVAENQTLAVALAQDQRAATNNDIINWETNGDNILWIK-X 93
           SPRSF +A             V     + V L ++ R    N  I    NG   + ++  
Sbjct: 61  SPRSFAQAKSNNARRR-----VRRRMVVDVDLEEETRGDPQNQTI---INGALYINLESS 112

Query: 92  XXXXXXXXXXXXXXXPVFNCPICMAALEEE 3
                          PVFNCPICMA L EE
Sbjct: 113 SCSVSPECPKEPPKEPVFNCPICMAPLVEE 142


>ref|XP_020224086.1| E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like
           isoform X2 [Cajanus cajan]
          Length = 193

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 54/156 (34%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
 Frame = -3

Query: 440 MSSRTDRSNRRRKMSLELDLNXXXXXXXXXXXXXXXXPD---VLIPMIDVDTSDDDIIET 270
           MSSRT RS RRRKM+LELDLN                       +PMIDV+  DDD++E+
Sbjct: 1   MSSRTARSTRRRKMNLELDLNRDPPAENVREEEEGPSTQHQQQQLPMIDVEAIDDDVVES 60

Query: 269 SPRSFQEATXXXXXXXXXXNPVAENQTLAVALAQDQRAATNND-------IINWETNGDN 111
           SPRSF +A             V     + V L ++ R    N         IN E++  +
Sbjct: 61  SPRSFAQAKSNNARRR-----VRRRMVVDVDLEEETRGDPQNQTIINGALYINLESSSCS 115

Query: 110 ILWIKXXXXXXXXXXXXXXXXPVFNCPICMAALEEE 3
           +                    PVFNCPICMA L EE
Sbjct: 116 VC---ENARKSPECPKEPPKEPVFNCPICMAPLVEE 148


>ref|XP_020224085.1| E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like
           isoform X1 [Cajanus cajan]
          Length = 201

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 54/156 (34%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
 Frame = -3

Query: 440 MSSRTDRSNRRRKMSLELDLNXXXXXXXXXXXXXXXXPD---VLIPMIDVDTSDDDIIET 270
           MSSRT RS RRRKM+LELDLN                       +PMIDV+  DDD++E+
Sbjct: 9   MSSRTARSTRRRKMNLELDLNRDPPAENVREEEEGPSTQHQQQQLPMIDVEAIDDDVVES 68

Query: 269 SPRSFQEATXXXXXXXXXXNPVAENQTLAVALAQDQRAATNND-------IINWETNGDN 111
           SPRSF +A             V     + V L ++ R    N         IN E++  +
Sbjct: 69  SPRSFAQAKSNNARRR-----VRRRMVVDVDLEEETRGDPQNQTIINGALYINLESSSCS 123

Query: 110 ILWIKXXXXXXXXXXXXXXXXPVFNCPICMAALEEE 3
           +                    PVFNCPICMA L EE
Sbjct: 124 VC---ENARKSPECPKEPPKEPVFNCPICMAPLVEE 156


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