BLASTX nr result
ID: Astragalus24_contig00025350
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00025350
(317 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009429897.1| photosystem I assembly protein ycf4 (plastid... 163 9e-49
ref|YP_009175771.1| photosystem I assembly protein ycf4 (chlorop... 155 9e-46
ref|YP_009242965.1| photosystem I assembly protein Ycf4 (chlorop... 138 3e-39
ref|YP_009440607.1| photosystem I assembly protein ycf4 (chlorop... 136 1e-38
ref|YP_009334201.1| photosystem I assembly protein Ycf4 (chlorop... 129 1e-35
ref|YP_009389865.1| photosystem I assembly protein Ycf4 (chlorop... 128 4e-35
ref|YP_009437903.1| photosystem I assembly protein ycf4 (chlorop... 127 6e-35
gb|AHY20425.1| photosystem I assembly protein ycf4 (chloroplast)... 114 1e-29
gb|AGR83927.1| putative photosystem I assembly protein Ycf4 (chl... 115 1e-29
gb|AGR83912.1| putative photosystem I assembly protein Ycf4 (chl... 115 1e-29
gb|AFR59963.1| putative photosystem I assembly protein Ycf4 (pla... 114 3e-29
gb|AGS43984.1| photosystem I assembly protein ycf4 (plastid) [Vi... 111 1e-28
ref|YP_009027214.1| photosystem I assembly protein ycf4 [Trifoli... 111 2e-28
gb|ADE42521.1| photosystem I assembly protein Ycf4 (chloroplast)... 111 2e-28
ref|YP_009046863.1| photosystem I assembly protein ycf4 (chlorop... 110 5e-28
ref|YP_009033517.1| photosystem I assembly protein ycf4 (chlorop... 110 5e-28
ref|YP_009027126.1| photosystem I assembly protein ycf4 [Trifoli... 109 1e-27
ref|XP_003605600.2| photosystem I assembly protein Ycf4 [Medicag... 114 2e-27
ref|YP_009027050.1| photosystem I assembly protein ycf4 [Trifoli... 108 4e-27
gb|AGW45913.1| photosystem I assembly protein ycf4 (plastid) [Le... 104 7e-26
>ref|YP_009429897.1| photosystem I assembly protein ycf4 (plastid) [Carmichaelia
australis]
gb|ASY01227.1| photosystem I assembly protein ycf4 (plastid) [Carmichaelia
australis]
Length = 221
Score = 163 bits (413), Expect = 9e-49
Identities = 81/100 (81%), Positives = 84/100 (84%)
Frame = -2
Query: 301 MIDXXXXXXXXXXXVTAGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWAS 122
MID + AGLLVY QQQISWGS HLMRRFAEDAWLY+VPGARKPINFFWAS
Sbjct: 1 MIDVFVPLVGLVLILMAGLLVYVQQQISWGSRHLMRRFAEDAWLYSVPGARKPINFFWAS 60
Query: 121 FTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPFLPQGVT 2
FTLLGSLGVLVISASSY+GRNFFS NS EFLVPFLPQGVT
Sbjct: 61 FTLLGSLGVLVISASSYFGRNFFSLNSDEFLVPFLPQGVT 100
>ref|YP_009175771.1| photosystem I assembly protein ycf4 (chloroplast) [Astragalus
mongholicus var. nakaianus]
gb|ALH42771.1| photosystem I assembly protein ycf4 (chloroplast) [Astragalus
mongholicus var. nakaianus]
Length = 195
Score = 155 bits (391), Expect = 9e-46
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = -2
Query: 223 ISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFN 44
+SWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFN
Sbjct: 1 MSWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFN 60
Query: 43 SSEFLVPFLPQGVT 2
SSEFLVPFLPQGVT
Sbjct: 61 SSEFLVPFLPQGVT 74
>ref|YP_009242965.1| photosystem I assembly protein Ycf4 (chloroplast) [Astragalus
mongholicus]
gb|AMQ99228.1| photosystem I assembly protein Ycf4 (chloroplast) [Astragalus
mongholicus]
gb|ANK78959.1| photosystem I assembly protein Ycf4 (chloroplast) [Astragalus
membranaceus var. membranaceus]
Length = 187
Score = 138 bits (347), Expect = 3e-39
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -2
Query: 199 MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF 20
MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF
Sbjct: 1 MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF 60
Query: 19 LPQGVT 2
LPQGVT
Sbjct: 61 LPQGVT 66
>ref|YP_009440607.1| photosystem I assembly protein ycf4 (chloroplast) [Lessertia
frutescens]
gb|ATG87672.1| photosystem I assembly protein ycf4 (chloroplast) [Lessertia
frutescens]
Length = 187
Score = 136 bits (343), Expect = 1e-38
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 199 MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF 20
MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNS EFLVPF
Sbjct: 1 MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSDEFLVPF 60
Query: 19 LPQGVT 2
LPQGVT
Sbjct: 61 LPQGVT 66
>ref|YP_009334201.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
microphylla]
ref|YP_009389941.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
korshinskii]
gb|APL97407.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
microphylla]
gb|APL97483.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
korshinskii]
Length = 198
Score = 129 bits (325), Expect = 1e-35
Identities = 61/73 (83%), Positives = 66/73 (90%), Gaps = 2/73 (2%)
Frame = -2
Query: 214 GSGHLMRRFAED--AWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNS 41
GSGHLMRR+ E W+YT+PGARKPINFFWASFTLLGSLGVL ISASS+YGRNFFSFNS
Sbjct: 4 GSGHLMRRYQEQEHTWIYTIPGARKPINFFWASFTLLGSLGVLFISASSFYGRNFFSFNS 63
Query: 40 SEFLVPFLPQGVT 2
SEF+VPFLPQG T
Sbjct: 64 SEFVVPFLPQGAT 76
>ref|YP_009389865.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
kozlowii]
gb|APL97305.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
kozlowii]
Length = 198
Score = 128 bits (321), Expect = 4e-35
Identities = 60/73 (82%), Positives = 65/73 (89%), Gaps = 2/73 (2%)
Frame = -2
Query: 214 GSGHLMRRFAED--AWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNS 41
GSGHLMRR+ E W+YT+PGARKPINFFWASFTLLGSLGVL ISASS+YGRNFFSFNS
Sbjct: 4 GSGHLMRRYQEQEHTWIYTIPGARKPINFFWASFTLLGSLGVLFISASSFYGRNFFSFNS 63
Query: 40 SEFLVPFLPQGVT 2
EF+VPFLPQG T
Sbjct: 64 DEFVVPFLPQGAT 76
>ref|YP_009437903.1| photosystem I assembly protein ycf4 (chloroplast) [Tibetia
liangshanensis]
gb|ATG33779.1| photosystem I assembly protein ycf4 (chloroplast) [Tibetia
liangshanensis]
Length = 188
Score = 127 bits (319), Expect = 6e-35
Identities = 58/66 (87%), Positives = 63/66 (95%)
Frame = -2
Query: 199 MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF 20
MRRF EDAWLYT+PGARKPINFFWASFTLLGSLGVL I+ASSY+GRNFFSFNSS+F+VPF
Sbjct: 1 MRRFQEDAWLYTIPGARKPINFFWASFTLLGSLGVLFIAASSYFGRNFFSFNSSDFVVPF 60
Query: 19 LPQGVT 2
LPQG T
Sbjct: 61 LPQGAT 66
>gb|AHY20425.1| photosystem I assembly protein ycf4 (chloroplast) (chloroplast)
[Trifolium pratense]
Length = 209
Score = 114 bits (286), Expect = 1e-29
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV+ + ISWGS R ++DAWL VPG++K INFFWASFTLLGSLGVL IS SS
Sbjct: 2 SALLVHVPKLISWGSEKHGCR-SQDAWLDIVPGSKKTINFFWASFTLLGSLGVLYISVSS 60
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFSF SSEF+VPFLPQGVT
Sbjct: 61 YYGRHFFSFISSEFVVPFLPQGVT 84
>gb|AGR83927.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula f. tricycla]
Length = 224
Score = 115 bits (287), Expect = 1e-29
Identities = 59/84 (70%), Positives = 67/84 (79%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV + ISWGS R ++DAWL VPG+RKPINFFWASFTLLGSLGVL +S SS
Sbjct: 17 SALLVNVPKLISWGSEKYGCR-SQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSS 75
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFS SSEF+VPFLPQGVT
Sbjct: 76 YYGRHFFSLISSEFVVPFLPQGVT 99
>gb|AGR83912.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula f. tricycla]
gb|AGV52593.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula f. tricycla]
Length = 224
Score = 115 bits (287), Expect = 1e-29
Identities = 59/84 (70%), Positives = 67/84 (79%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV + ISWGS R ++DAWL VPG+RKPINFFWASFTLLGSLGVL +S SS
Sbjct: 17 SALLVNVPKLISWGSEKYGCR-SQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSS 75
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFS SSEF+VPFLPQGVT
Sbjct: 76 YYGRHFFSLISSEFVVPFLPQGVT 99
>gb|AFR59963.1| putative photosystem I assembly protein Ycf4 (plastid) [Medicago
truncatula]
gb|AFR60039.1| putative photosystem I assembly protein Ycf4 (plastid) [Medicago
truncatula]
gb|AFR60115.1| putative photosystem I assembly protein Ycf4 (plastid) [Medicago
truncatula]
gb|AGR83887.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula var. truncatula]
gb|AGR83892.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula f. tricycla]
gb|AGR83897.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula var. truncatula]
gb|AGR83902.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula var. truncatula]
gb|AGR83907.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula var. truncatula]
gb|AGR83917.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula var. truncatula]
gb|AGR83922.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula var. truncatula]
gb|AGR83932.1| putative photosystem I assembly protein Ycf4 (chloroplast)
[Medicago truncatula var. truncatula]
Length = 224
Score = 114 bits (284), Expect = 3e-29
Identities = 59/84 (70%), Positives = 67/84 (79%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV + ISWGS R ++DAWL VPG+RKPINFFWASFTLLGSLGVL +S SS
Sbjct: 17 SALLVNVPKFISWGSEKHGCR-SQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSS 75
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFS SSEF+VPFLPQGVT
Sbjct: 76 YYGRHFFSLISSEFVVPFLPQGVT 99
>gb|AGS43984.1| photosystem I assembly protein ycf4 (plastid) [Vicia faba]
Length = 204
Score = 111 bits (278), Expect = 1e-28
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV+ + ISWGS L R ++DAWL VPG+RK IN FWASFTLLGSLGVL IS SS
Sbjct: 2 SALLVHVPKFISWGSEKLGCR-SQDAWLDIVPGSRKIINLFWASFTLLGSLGVLYISVSS 60
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFSF SSEF++PFL QGVT
Sbjct: 61 YYGRDFFSFISSEFVIPFLTQGVT 84
>ref|YP_009027214.1| photosystem I assembly protein ycf4 [Trifolium repens]
gb|AGO63641.1| photosystem I assembly protein ycf4 (plastid) [Trifolium repens]
Length = 209
Score = 111 bits (278), Expect = 2e-28
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV+ + ISW S R ++DAWL VPG++K INFFWASFTLLGSLGVL IS SS
Sbjct: 2 SALLVHVPKFISWRSKKQGCR-SQDAWLDIVPGSKKTINFFWASFTLLGSLGVLYISVSS 60
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFSF SSEF+VPFLPQGVT
Sbjct: 61 YYGRHFFSFISSEFVVPFLPQGVT 84
>gb|ADE42521.1| photosystem I assembly protein Ycf4 (chloroplast) [Vicia faba]
Length = 219
Score = 111 bits (278), Expect = 2e-28
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV+ + ISWGS L R ++DAWL VPG+RK IN FWASFTLLGSLGVL IS SS
Sbjct: 17 SALLVHVPKFISWGSEKLGCR-SQDAWLDIVPGSRKIINLFWASFTLLGSLGVLYISVSS 75
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFSF SSEF++PFL QGVT
Sbjct: 76 YYGRDFFSFISSEFVIPFLTQGVT 99
>ref|YP_009046863.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
subterraneum]
gb|AID67348.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
subterraneum]
Length = 209
Score = 110 bits (275), Expect = 5e-28
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Frame = -2
Query: 253 AGLLVYFQQQISW-GSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISAS 77
+ LLV+ + ISW H R ++DAWL VPG++K INFFWASFTLLGSLGVL IS S
Sbjct: 2 SALLVHVPKFISWEAEKHGCR--SQDAWLDIVPGSKKTINFFWASFTLLGSLGVLYISVS 59
Query: 76 SYYGRNFFSFNSSEFLVPFLPQGVT 2
SYYGR+FFSF SSEF+VPFLPQGVT
Sbjct: 60 SYYGRHFFSFISSEFVVPFLPQGVT 84
>ref|YP_009033517.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
meduseum]
gb|AHY20428.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
meduseum]
gb|AHY85596.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
meduseum]
Length = 209
Score = 110 bits (275), Expect = 5e-28
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Frame = -2
Query: 253 AGLLVYFQQQISW-GSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISAS 77
+ LLV+ + ISW H R ++DAWL VPG++K INFFWASFTLLGSLGVL IS S
Sbjct: 2 SALLVHVPKFISWEAEKHGCR--SQDAWLDIVPGSKKTINFFWASFTLLGSLGVLYISVS 59
Query: 76 SYYGRNFFSFNSSEFLVPFLPQGVT 2
SYYGR+FFSF SSEF+VPFLPQGVT
Sbjct: 60 SYYGRHFFSFISSEFVVPFLPQGVT 84
>ref|YP_009027126.1| photosystem I assembly protein ycf4 [Trifolium aureum]
gb|AGO63780.1| photosystem I assembly protein ycf4 (plastid) [Trifolium aureum]
Length = 209
Score = 109 bits (272), Expect = 1e-27
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV+ + IS GS R ++DAWL VPG+RK INFFWASFTLLGSLGVL IS SS
Sbjct: 2 SALLVHVPKFISGGSEKHGCR-SQDAWLDIVPGSRKTINFFWASFTLLGSLGVLYISVSS 60
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFSF SS+F+VPFLPQGVT
Sbjct: 61 YYGRHFFSFISSDFVVPFLPQGVT 84
>ref|XP_003605600.2| photosystem I assembly protein Ycf4 [Medicago truncatula]
gb|AES87797.2| photosystem I assembly protein Ycf4 [Medicago truncatula]
Length = 474
Score = 114 bits (284), Expect = 2e-27
Identities = 59/84 (70%), Positives = 67/84 (79%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV + ISWGS R ++DAWL VPG+RKPINFFWASFTLLGSLGVL +S SS
Sbjct: 267 SALLVNVPKFISWGSEKHGCR-SQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSS 325
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFS SSEF+VPFLPQGVT
Sbjct: 326 YYGRHFFSLISSEFVVPFLPQGVT 349
>ref|YP_009027050.1| photosystem I assembly protein ycf4 [Trifolium grandiflorum]
gb|AGO63704.1| photosystem I assembly protein ycf4 (plastid) [Trifolium
grandiflorum]
Length = 209
Score = 108 bits (269), Expect = 4e-27
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = -2
Query: 253 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 74
+ LLV+ + IS GS R ++DAWL VPG+RK INFFWA FTLLGSLGVL IS SS
Sbjct: 2 SALLVHVPKFISGGSEKHGCR-SQDAWLDIVPGSRKTINFFWAFFTLLGSLGVLYISVSS 60
Query: 73 YYGRNFFSFNSSEFLVPFLPQGVT 2
YYGR+FFSF SSEF+VPFLPQGVT
Sbjct: 61 YYGRHFFSFISSEFVVPFLPQGVT 84
>gb|AGW45913.1| photosystem I assembly protein ycf4 (plastid) [Lens culinaris]
Length = 201
Score = 104 bits (260), Expect = 7e-26
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = -2
Query: 187 AEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPFLPQG 8
++DAWL VPG++K INFFWASFTLLGSLGVL IS SSYYGR+FFSF SSEF +PFLPQG
Sbjct: 20 SQDAWLDIVPGSKKIINFFWASFTLLGSLGVLYISVSSYYGRDFFSFISSEFFIPFLPQG 79
Query: 7 VT 2
VT
Sbjct: 80 VT 81